mRNA_P-wetherbeei_contig10347.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10347.1.1
Unique NamemRNA_P-wetherbeei_contig10347.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A835ZDB5_9STRA (Mef2, mitochondrial translation elongation factor EF-G n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDB5_9STRA)

HSP 1 Score: 310 bits (795), Expect = 1.950e-97
Identity = 162/248 (65.32%), Postives = 190/248 (76.61%), Query Frame = 1
Query:   43 VRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYIA 786
            +RN+G+IAHIDAGKTTTTERMLY+VG+TRHQGSVDTGDTVTDF+PQERERGITIQSAAVS+ W   HVNLIDTPGHVDFS+EVER +RVLDGAVLV+DAVAGVQAQTETVWRTA    VPA+AFVNKMDR GADF  A  +L  RLG TPLPIQ+P+GS GG+ GAVDL+ M+  +Y   G   G               D+V L  ++L   E   PG++  AAAARA LL G+AE DE F++TY++
Sbjct:    4 IRNLGIIAHIDAGKTTTTERMLYIVGDTRHQGSVDTGDTVTDFMPQERERGITIQSAAVSVEWNGHHVNLIDTPGHVDFSIEVERAVRVLDGAVLVLDAVAGVQAQTETVWRTATSHNVPAIAFVNKMDRQGADFNIAVQTLRNRLGVTPLPIQLPIGSEGGFKGAVDLIAMEGLVYQPGGRWEGDV-------------DTVELRRVALGELEGGCPGLSAAAAAARAELLMGMAEADEAFMDTYLS 238          
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: D7G8E9_ECTSI (Mef2, mitochondrial translation elongation factor EF-G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8E9_ECTSI)

HSP 1 Score: 284 bits (726), Expect = 1.190e-86
Identity = 150/248 (60.48%), Postives = 181/248 (72.98%), Query Frame = 1
Query:   40 RVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYI 783
            R+RNIG+IAHIDAGKTTTTER+LYL G+   QGSVD+GDTVTDF+PQERERGITIQSAAV++ W    +N+IDTPGHVDF +EVERC RVLDGAVLV+D VAGVQAQTETVWRTA   ++PA+AFVNK+DR GADF     +L RRLG  PLP+Q+P+G+   + G VDL+TM A LY         AG  G    +A+ARDSV    + L  A ++ PG  +RA AAR  LL  LA+ DE F E  +
Sbjct:   77 RIRNIGIIAHIDAGKTTTTERILYLTGKITRQGSVDSGDTVTDFMPQERERGITIQSAAVTVEWGGGRINVIDTPGHVDFGLEVERCARVLDGAVLVLDGVAGVQAQTETVWRTAQKHEIPAIAFVNKLDRQGADFKHVLGTLERRLGVLPLPLQIPVGTGTDFVGMVDLVTMTAILYQ--------AGADGLGKMRASARDSVTFVTLPLDHANDIFPGTVKRANAARQELLWALADADEAFAELVL 316          
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A4D9DDG5_9STRA (Tr-type G domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DDG5_9STRA)

HSP 1 Score: 282 bits (722), Expect = 5.940e-86
Identity = 152/246 (61.79%), Postives = 182/246 (73.98%), Query Frame = 1
Query:   46 RNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYI 783
            RNIG+IAHIDAGKTTTTER+LYL GET H G VDTGDTV DFLPQERERGITIQSAA+SL W +  +N+IDTPGHVDF++EVER +R+LDGA +VVDAVAGVQAQTETVWR A  ++VP +AFVNKMDRDGADF RA  SL RRLGA  +P+Q+PLG+ G + G VDLLTM+  ++ +      +       APK+  R SV LT   LA  ++        A  AR ALLE LA+ DE F+ETY+
Sbjct:   55 RNIGIIAHIDAGKTTTTERILYLAGETGHVGDVDTGDTVMDFLPQERERGITIQSAAISLDWHDTRINIIDTPGHVDFTMEVERAVRILDGAAVVVDAVAGVQAQTETVWRQARKYKVPTIAFVNKMDRDGADFPRAVQSLRRRLGAPAVPVQLPLGAGGDFQGVVDLLTMEEVVWEAPQTSGTNPSPLTPFAPKSKRR-SVCLTRRPLAGGDKTKEERLMAAREARVALLEALADADETFMETYL 299          
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: W7TIG4_9STRA (Translation elongation factor g n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIG4_9STRA)

HSP 1 Score: 284 bits (727), Expect = 4.700e-85
Identity = 154/250 (61.60%), Postives = 185/250 (74.00%), Query Frame = 1
Query:   34 LIRVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYI 783
            L + RNIG+IAHIDAGKTTTTER+LYL GET H G VDTGDTV DFLPQERERGITIQSAA+SL W +  +N+IDTPGHVDF++EVER +RVLDGA +VVDAVAGVQAQTETVWR A  ++VP +AFVNKMDRDGADF RA  SL RRLGA  +P+Q+PLG+ G + G VDLLTM+  ++ +      +      +APK+  R SV LT   LA  ++        A  AR ALLE LA+ DE F+ETY+
Sbjct:   51 LKKCRNIGIIAHIDAGKTTTTERILYLAGETGHVGDVDTGDTVMDFLPQERERGITIQSAAISLDWHDTRINIIDTPGHVDFTMEVERAVRVLDGAAVVVDAVAGVQAQTETVWRQARKYKVPTIAFVNKMDRDGADFPRAVQSLRRRLGAPAVPVQLPLGAGGDFQGVVDLLTMEEVVWEAPQTSGKNPSPLTPSAPKSKRR-SVCLTRRPLAGGDKTKEERLMAAREARVALLEALADADETFMETYL 299          
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A812ZX76_9DINO (FusA protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812ZX76_9DINO)

HSP 1 Score: 235 bits (599), Expect = 3.210e-72
Identity = 123/251 (49.00%), Postives = 167/251 (66.53%), Query Frame = 1
Query:   40 RVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYIAGE 792
            R+RNIG++AHIDAGKTTTTER+L+L G +R  G V  GDT+ D+LP ERERGITI SAA+S  W N  +NLIDTPGHVDF+VEVER +RVLDGA+ + D VAGV+AQ+ETVW  AD + VP + FVNKMDR+GA + R A ++  RLGATP+  Q+PLG A  + G VDL++M++ L+                       + ++   + L +     P I E+A + R A+LE +A+ D+ F E ++ G+
Sbjct:    3 RIRNIGIMAHIDAGKTTTTERLLFLSGYSRRVGEVHDGDTIMDYLPLERERGITINSAAISFQWANHDINLIDTPGHVDFTVEVERSLRVLDGAIAIFDGVAGVEAQSETVWEQADRYGVPRIGFVNKMDREGASYERTAAAMAARLGATPVLCQLPLGEAAEFQGIVDLISMRSYLWKD--------------------EEELSFKEVPLTS---YSPAIAEKAESQRLAMLEAVADADDTFAEVFLDGK 230          
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A7C1G3B8_9CHLR (Elongation factor G n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1G3B8_9CHLR)

HSP 1 Score: 242 bits (618), Expect = 6.120e-72
Identity = 132/261 (50.57%), Postives = 168/261 (64.37%), Query Frame = 1
Query:   19 AREAALIRVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDP---GITERAAAARAALLEGLAEVDEPFLETYIAGE 792
            AR+ AL ++RNIG+IAHIDAGKTTTTER+L+  G T   GSVD G   TD++PQERERGITI +AA++  WR+  +N+IDTPGH+DF+ EV+R +RVLDG V+V DAVAGV+ Q+ETVWR AD ++VP V FVNKMDR GADF R    +  RLGATP+PIQ+P+G  G + GAVDLLTMQA  Y+                               L A  +  P    +   A AAR A++E + E D+  L  Y+ GE
Sbjct:    2 ARQFALEKIRNIGIIAHIDAGKTTTTERILFYTGRTHRLGSVDEGTATTDWMPQERERGITITAAAITAYWRDHQINIIDTPGHIDFTAEVQRSLRVLDGGVVVFDAVAGVEPQSETVWRQADRYRVPRVCFVNKMDRTGADFHRTVAMIRERLGATPVPIQLPIGVEGSFRGAVDLLTMQAVTYTDE-----------------------------LGAHRQYGPIPDELVGAAQAAREAMIEHIVETDDALLHKYLEGE 233          
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A0S8KNP0_9CHLR (Elongation factor G (Fragment) n=1 Tax=Anaerolineae bacterium SM23_84 TaxID=1703388 RepID=A0A0S8KNP0_9CHLR)

HSP 1 Score: 229 bits (583), Expect = 6.560e-72
Identity = 110/178 (61.80%), Postives = 140/178 (78.65%), Query Frame = 1
Query:   40 RVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALY 573
            R+RNIG+IAHIDAGKTTTTER+L   GET   G+VD G TVTDF+ QERERGITIQ+AAV+  W++  +N+IDTPGH+DF+ EV+R +RVLDG V++ DAV+GV+ Q+ETVWR AD F VP +AFVNKMDR GADFAR  + +  RLGA P+ +Q+P+G+   + G VDLL M A L+
Sbjct:   14 RIRNIGIIAHIDAGKTTTTERILLHAGETHRMGNVDDGTTVTDFMDQERERGITIQAAAVTCDWKDHQINIIDTPGHIDFTAEVQRSLRVLDGGVVIFDAVSGVEPQSETVWRQADRFGVPRIAFVNKMDRPGADFARTLEMVRARLGANPVAVQMPIGAEAAFRGFVDLLEMTAVLF 191          
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A7V3K237_9CHLR (GTP-binding protein (Fragment) n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V3K237_9CHLR)

HSP 1 Score: 230 bits (586), Expect = 6.830e-71
Identity = 127/258 (49.22%), Postives = 164/258 (63.57%), Query Frame = 1
Query:   19 AREAALIRVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYIAGE 792
            AR   L RVRNIG+IAHIDAGKTTTTER+L+  G T   G+VD G TVTD++ QERERGITI +AAV+  WR+  +N+IDTPGH+DF+ EV+R +RVLDG V++ DAVAGV+ Q+ETVWR AD + VP + F+NKMDR GADF RA + +  RL A P+ +QVP+G    + G VDL+T +A LY+                      D +     S    E+L     E  A  RA +LE + E D+  LE Y+ GE
Sbjct:    2 ARPCPLERVRNIGMIAHIDAGKTTTTERVLFYAGRTHRMGNVDEGTTVTDWMEQERERGITITAAAVTCFWRDHQINIIDTPGHIDFTAEVQRSLRVLDGGVVIFDAVAGVEPQSETVWRQADRYGVPRICFINKMDRLGADFWRAVEMIRERLNANPVAVQVPIGVEASFQGLVDLITGKALLYA----------------------DDLGTVIRSTEVPEDL----REEVALRRAQMLEQIVETDDALLEQYLEGE 233          
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A7V4ZFY9_9CHLR (Elongation factor G n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7V4ZFY9_9CHLR)

HSP 1 Score: 238 bits (608), Expect = 1.620e-70
Identity = 128/255 (50.20%), Postives = 161/255 (63.14%), Query Frame = 1
Query:   28 AALIRVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYIAGE 792
            A L ++RNIG+IAHIDAGKTTTTER+LY  G+T   GSVD G TVTDFLPQERERGITIQSAAV+  W+  H+N+IDTPGH+DF+ EV+R +RVLDG V+V D VAGV+ Q+ETVWR AD F VP + FVNKMDR GA+FAR  D   RRL   P+ +Q+P+GS   + G VDLL M+A  +   G                                  + P +   A + R  ++E LA+VD+   E Y+ GE
Sbjct:    2 AELNQIRNIGIIAHIDAGKTTTTERILYHTGQTYRLGSVDEGTTVTDFLPQERERGITIQSAAVTCQWQGHHINIIDTPGHIDFTAEVQRSLRVLDGGVVVFDGVAGVEPQSETVWRQADRFGVPRIGFVNKMDRTGANFARVLDMARRRLSCNPIAVQIPIGSEASFEGVVDLLAMKAVRFDEDGQ----------------------------PVDGPIPPALEAEALSWRERMIEQLADVDDAIAERYLEGE 228          
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Match: A0A847FU03_9CHLR (Elongation factor G n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A847FU03_9CHLR)

HSP 1 Score: 236 bits (603), Expect = 9.730e-70
Identity = 126/258 (48.84%), Postives = 166/258 (64.34%), Query Frame = 1
Query:   22 REAALIRVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDTGDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERCIRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFARAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGSAGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLAEVDEPFLETYIAGEP 795
            RE  + R+RNIG+IAHIDAGKTTTTER+L+  G T   G+VD G TVTD++ QERERGITI SAAV+  WRN  +N++DTPGH+DF+ EV+R +RVLDG V+V DAV+GV+ Q+ETVWR AD + VP + FVNKMDR GADF    D +  +L A+P+PIQ+P+GS   + G VDL TMQA LY+                      D +     + A   +L P   E+    R  ++E +AE D+  +E Y+ G P
Sbjct:    3 REYPIERIRNIGIIAHIDAGKTTTTERILFYTGRTHRMGNVDDGTTVTDWMEQERERGITITSAAVTCFWRNCQINIVDTPGHIDFTAEVQRSLRVLDGGVVVFDAVSGVEPQSETVWRQADRYHVPRICFVNKMDRLGADFWHTVDMIREQLAASPVPIQIPIGSEDRFRGLVDLFTMQAILYT----------------------DDLGSVQETTAIPADLVPFAEEQ----REQMVEKIAECDDALMEKYLEGAP 234          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10347.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZDB5_9STRA1.950e-9765.32Mef2, mitochondrial translation elongation factor ... [more]
D7G8E9_ECTSI1.190e-8660.48Mef2, mitochondrial translation elongation factor ... [more]
A0A4D9DDG5_9STRA5.940e-8661.79Tr-type G domain-containing protein n=1 Tax=Nannoc... [more]
W7TIG4_9STRA4.700e-8561.60Translation elongation factor g n=1 Tax=Nannochlor... [more]
A0A812ZX76_9DINO3.210e-7249.00FusA protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A7C1G3B8_9CHLR6.120e-7250.57Elongation factor G n=1 Tax=Chloroflexi bacterium ... [more]
A0A0S8KNP0_9CHLR6.560e-7261.80Elongation factor G (Fragment) n=1 Tax=Anaerolinea... [more]
A0A7V3K237_9CHLR6.830e-7149.22GTP-binding protein (Fragment) n=1 Tax=Anaerolinea... [more]
A0A7V4ZFY9_9CHLR1.620e-7050.20Elongation factor G n=1 Tax=Anaerolineae bacterium... [more]
A0A847FU03_9CHLR9.730e-7048.84Elongation factor G n=1 Tax=Anaerolineaceae bacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10347contigP-wetherbeei_contig10347:348..1145 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G8E9
Preferred nameGFM2
PFAMsEFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2
Model size798
Max annot lvl2759|Eukaryota
KEGG koko:K02355
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0003924,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0019538,GO:0022411,GO:0031974,GO:0032543,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013,GO:0070126,GO:0071704,GO:0071826,GO:0071840,GO:0140053,GO:1901564,GO:1901566,GO:1901576,GO:1903008
Exons1
Evalue1.95e-87
EggNOG OGsCOG4108@1|root,KOG0464@2759|Eukaryota
DescriptionMitochondrial GTPase that mediates the disassembly of ribosomes from messenger RNA at the termination of mitochondrial protein biosynthesis. Acts in collaboration with MRRF. GTP hydrolysis follows the ribosome disassembly and probably occurs on the ribosome large subunit. Not involved in the GTP-dependent ribosomal translocation step during translation elongation
Cds size798
COG categoryJ
BRITEko00000,ko03012,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185864.7737556-CDS-P-wetherbeei_contig10347:347..11451683185864.7737556-CDS-P-wetherbeei_contig10347:347..1145Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10347 348..1145 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10347.1.1prot_P-wetherbeei_contig10347.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10347 348..1145 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10347.1.1

>prot_P-wetherbeei_contig10347.1.1 ID=prot_P-wetherbeei_contig10347.1.1|Name=mRNA_P-wetherbeei_contig10347.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp
ALARRSAREAALIRVRNIGVIAHIDAGKTTTTERMLYLVGETRHQGSVDT
GDTVTDFLPQERERGITIQSAAVSLAWRNAHVNLIDTPGHVDFSVEVERC
IRVLDGAVLVVDAVAGVQAQTETVWRTADHFQVPAVAFVNKMDRDGADFA
RAADSLHRRLGATPLPIQVPLGSAGGYCGAVDLLTMQAALYSSSGNGNGS
AGTGGNAAPKAAARDSVALTHISLAAAEELDPGITERAAAARAALLEGLA
EVDEPFLETYIAGEP*
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mRNA from alignment at P-wetherbeei_contig10347:348..1145-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10347.1.1 ID=mRNA_P-wetherbeei_contig10347.1.1|Name=mRNA_P-wetherbeei_contig10347.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig10347:348..1145- (Phaeothamnion wetherbeei SAG_119_79)
GCTCTTGCGAGGCGCAGCGCGCGGGAAGCGGCGCTAATACGTGTGCGCAA CATCGGCGTCATCGCCCACATCGACGCCGGCAAGACGACGACGACGGAGC GCATGCTCTACTTGGTTGGGGAGACGCGGCACCAGGGGAGCGTCGACACG GGCGACACGGTCACCGACTTCCTGCCGCAGGAGCGCGAGCGCGGCATCAC CATCCAGAGCGCCGCCGTCAGCCTGGCGTGGCGCAACGCGCATGTCAATC TGATCGACACGCCAGGCCACGTCGACTTTTCTGTCGAGGTGGAGCGCTGC ATCCGCGTCCTTGACGGCGCCGTGCTGGTCGTCGACGCCGTCGCGGGTGT CCAGGCGCAGACTGAAACCGTCTGGCGCACAGCCGACCACTTCCAGGTGC CCGCTGTCGCCTTTGTTAACAAGATGGACCGCGACGGCGCCGACTTTGCC CGCGCTGCCGACAGCCTCCACCGCCGTCTAGGTGCGACGCCGCTGCCAAT CCAGGTACCGCTGGGCTCCGCCGGCGGTTACTGCGGCGCTGTCGACCTTC TTACAATGCAGGCCGCCCTTTACAGCAGCAGCGGCAACGGTAATGGGAGC GCCGGTACAGGCGGCAATGCGGCTCCAAAGGCGGCGGCACGCGATAGCGT CGCTCTGACGCATATTTCGCTGGCTGCTGCGGAGGAGCTGGACCCCGGAA TAACAGAGCGCGCCGCCGCTGCCCGTGCGGCGCTGCTGGAAGGGTTGGCG GAGGTGGACGAGCCATTTCTTGAGACTTACATTGCAGGTGAGCCCTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10347:348..1145-

>mRNA_P-wetherbeei_contig10347.1.1 ID=mRNA_P-wetherbeei_contig10347.1.1|Name=mRNA_P-wetherbeei_contig10347.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig10347:348..1145- (Phaeothamnion wetherbeei SAG_119_79)
GCTCTTGCGAGGCGCAGCGCGCGGGAAGCGGCGCTAATACGTGTGCGCAA
CATCGGCGTCATCGCCCACATCGACGCCGGCAAGACGACGACGACGGAGC
GCATGCTCTACTTGGTTGGGGAGACGCGGCACCAGGGGAGCGTCGACACG
GGCGACACGGTCACCGACTTCCTGCCGCAGGAGCGCGAGCGCGGCATCAC
CATCCAGAGCGCCGCCGTCAGCCTGGCGTGGCGCAACGCGCATGTCAATC
TGATCGACACGCCAGGCCACGTCGACTTTTCTGTCGAGGTGGAGCGCTGC
ATCCGCGTCCTTGACGGCGCCGTGCTGGTCGTCGACGCCGTCGCGGGTGT
CCAGGCGCAGACTGAAACCGTCTGGCGCACAGCCGACCACTTCCAGGTGC
CCGCTGTCGCCTTTGTTAACAAGATGGACCGCGACGGCGCCGACTTTGCC
CGCGCTGCCGACAGCCTCCACCGCCGTCTAGGTGCGACGCCGCTGCCAAT
CCAGGTACCGCTGGGCTCCGCCGGCGGTTACTGCGGCGCTGTCGACCTTC
TTACAATGCAGGCCGCCCTTTACAGCAGCAGCGGCAACGGTAATGGGAGC
GCCGGTACAGGCGGCAATGCGGCTCCAAAGGCGGCGGCACGCGATAGCGT
CGCTCTGACGCATATTTCGCTGGCTGCTGCGGAGGAGCTGGACCCCGGAA
TAACAGAGCGCGCCGCCGCTGCCCGTGCGGCGCTGCTGGAAGGGTTGGCG
GAGGTGGACGAGCCATTTCTTGAGACTTACATTGCAGGTGAGCCCTAA
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