mRNA_P-wetherbeei_contig10336.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10336.1.1
Unique NamemRNA_P-wetherbeei_contig10336.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10336.1.1 vs. uniprot
Match: A0A7V4P9B4_9PLAN (Succinate--CoA ligase [ADP-forming] subunit alpha n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7V4P9B4_9PLAN)

HSP 1 Score: 525 bits (1352), Expect = 3.010e-187
Identity = 264/294 (89.80%), Postives = 285/294 (96.94%), Query Frame = 1
Query:   16 DKNTKVICQGITGSQGTFHTIQAMEYGTQVVGGVTPGKGGSKHPDAKLAGVPIFDTVAEAKAKSGATATSIYVPPPYAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALAGSWSRLIGPNCPGVLTPNACKIGIMPANIFKKGSVGIVSRSGTLTYEAVKQTSDAGLGQTTAVGIGGDPVKGTEFIDVLEMFLADPETTSIIMIGEIGGSAEEDAADFIKREAAKGRKKPMAGFIAGATAPPGRRMGHAGAIISGGKGKAEDKIEAMRSAGIAIADSPAALGTTLAKVLKG 897
            D+NTKVICQGITGSQGTFHTIQA +YGTQ+VGGVTPGKGGS+HPDAKLAGVP+FDTVA+AK  +GATATSIYVPPPYAADAILEAIDAEIPLIVCITEGIPV+DM++VKRAL+GSWSRLIGPNCPGVLTPNACKIGIMP NIFK G+VGIVSRSGTLTYEAVKQT+DAGLGQ+TAVGIGGDPVKG+EFIDVL+MFL+DP+T SIIMIGEIGGSAEEDA DF+KREAAKGRKKPMAGFIAG+TAPPGRRMGHAGAIISGGKGKAEDK EAMR AGIAIADSPA+LGTTLAKVLKG
Sbjct:    1 DRNTKVICQGITGSQGTFHTIQAKDYGTQIVGGVTPGKGGSRHPDAKLAGVPLFDTVADAKKATGATATSIYVPPPYAADAILEAIDAEIPLIVCITEGIPVMDMIRVKRALSGSWSRLIGPNCPGVLTPNACKIGIMPGNIFKAGTVGIVSRSGTLTYEAVKQTTDAGLGQSTAVGIGGDPVKGSEFIDVLDMFLSDPDTHSIIMIGEIGGSAEEDACDFLKREAAKGRKKPMAGFIAGSTAPPGRRMGHAGAIISGGKGKAEDKFEAMRQAGIAIADSPASLGTTLAKVLKG 294          
BLAST of mRNA_P-wetherbeei_contig10336.1.1 vs. uniprot
Match: A0A2W4L586_9PROT (Succinate--CoA ligase [ADP-forming] subunit alpha n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2W4L586_9PROT)

HSP 1 Score: 515 bits (1327), Expect = 2.330e-183
Identity = 266/299 (88.96%), Postives = 282/299 (94.31%), Query Frame = 1
Query:    1 MAILVDKNTKVICQGITGSQGTFHTIQAMEYGTQVVGGVTPGKGGSKHPDAKLAGVPIFDTVAEAKAKSGATATSIYVPPPYAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALAGSWSRLIGPNCPGVLTPNACKIGIMPANIFKKGSVGIVSRSGTLTYEAVKQTSDAGLGQTTAVGIGGDPVKGTEFIDVLEMFLADPETTSIIMIGEIGGSAEEDAADFIKREAAKGRKKPMAGFIAGATAPPGRRMGHAGAIISGGKGKAEDKIEAMRSAGIAIADSPAALGTTLAKVLKG 897
            MAILVDKNTKVICQGITGSQGTFHT QA  YGTQ+VGGVTPGKGG+KHPD  LA VP+F+TVAEAKAK+GATATSIYVPPP+AADAILEAIDAEIPLIVCITEGIPV+DM+KVKRAL GS SRLIGPNCPGVLTP+ CKIGIMP NIFK+G VGIVSRSGTLTYEAVKQTSDAGLGQ+TAVGIGGDPVKGTEFIDVLEMFLADP+T SIIMIGEIGGSAEE+AA+FIK EAAKGRKKPM GFIAG TAPPGRRMGHAGAIISGGKGKAEDK+EAMRSAGIAIADSPA+LGTTL KVL G
Sbjct:    1 MAILVDKNTKVICQGITGSQGTFHTKQAKAYGTQIVGGVTPGKGGTKHPDPDLADVPLFNTVAEAKAKTGATATSIYVPPPFAADAILEAIDAEIPLIVCITEGIPVMDMIKVKRALEGSSSRLIGPNCPGVLTPDECKIGIMPGNIFKRGHVGIVSRSGTLTYEAVKQTSDAGLGQSTAVGIGGDPVKGTEFIDVLEMFLADPDTHSIIMIGEIGGSAEEEAAEFIKSEAAKGRKKPMVGFIAGVTAPPGRRMGHAGAIISGGKGKAEDKLEAMRSAGIAIADSPASLGTTLLKVLNG 299          
BLAST of mRNA_P-wetherbeei_contig10336.1.1 vs. uniprot
Match: A0A2W4RDE0_9PROT (Succinate--CoA ligase [ADP-forming] subunit alpha n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4RDE0_9PROT)

HSP 1 Score: 513 bits (1320), Expect = 2.720e-182
Identity = 266/299 (88.96%), Postives = 281/299 (93.98%), Query Frame = 1
Query:    1 MAILVDKNTKVICQGITGSQGTFHTIQAMEYGTQVVGGVTPGKGGSKHPDAKLAGVPIFDTVAEAKAKSGATATSIYVPPPYAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALAGSWSRLIGPNCPGVLTPNACKIGIMPANIFKKGSVGIVSRSGTLTYEAVKQTSDAGLGQTTAVGIGGDPVKGTEFIDVLEMFLADPETTSIIMIGEIGGSAEEDAADFIKREAAKGRKKPMAGFIAGATAPPGRRMGHAGAIISGGKGKAEDKIEAMRSAGIAIADSPAALGTTLAKVLKG 897
            MAILVDKNTKVICQGITGSQGTFHT QA  YGTQ+V GVTPGKGG+KHPD +LA VP+F+TVAEAKAK+GATATSIYVPP +AADAILEAIDAEIPLIVCITEGIPV+DMVKVKRAL GS SRLIGPNCPGVLTP+ CKIGIMP NIFK+G VGIVSRSGTLTYEAVKQTSDAGLGQ+TAVGIGGDPVKGTEFIDVLEMFLADP+T SIIMIGEIGGSAEE+AA+FIK EAAKGRKKPM GFIAG TAPPGRRMGHAGAIISGGKGKAEDK+EAMRSAGIAIADSPAALGTTL KVL G
Sbjct:    1 MAILVDKNTKVICQGITGSQGTFHTKQAKAYGTQIVAGVTPGKGGAKHPDPELADVPLFNTVAEAKAKTGATATSIYVPPAFAADAILEAIDAEIPLIVCITEGIPVMDMVKVKRALQGSSSRLIGPNCPGVLTPDECKIGIMPGNIFKRGHVGIVSRSGTLTYEAVKQTSDAGLGQSTAVGIGGDPVKGTEFIDVLEMFLADPDTHSIIMIGEIGGSAEEEAAEFIKSEAAKGRKKPMVGFIAGVTAPPGRRMGHAGAIISGGKGKAEDKLEAMRSAGIAIADSPAALGTTLVKVLNG 299          
BLAST of mRNA_P-wetherbeei_contig10336.1.1 vs. uniprot
Match: A0A537R4P8_9PROT (Succinate--CoA ligase [ADP-forming] subunit alpha n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A537R4P8_9PROT)

HSP 1 Score: 509 bits (1312), Expect = 6.020e-181
Identity = 264/299 (88.29%), Postives = 282/299 (94.31%), Query Frame = 1
Query:    1 MAILVDKNTKVICQGITGSQGTFHTIQAMEYGTQVVGGVTPGKGGSKHPDAKLAGVPIFDTVAEAKAKSGATATSIYVPPPYAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALAGSWSRLIGPNCPGVLTPNACKIGIMPANIFKKGSVGIVSRSGTLTYEAVKQTSDAGLGQTTAVGIGGDPVKGTEFIDVLEMFLADPETTSIIMIGEIGGSAEEDAADFIKREAAKGRKKPMAGFIAGATAPPGRRMGHAGAIISGGKGKAEDKIEAMRSAGIAIADSPAALGTTLAKVLKG 897
            MAILVDKNTKVICQGITGSQGTFHT QA+ YGTQVVGGVTPGKGG+KHPD KLA VPIFDTV +A+ K+GATATSIYVPP +AADAILEAIDAEIPLIVCITEGIPVLDMVKVKRAL GS SRLIGPNCPGVLTPNACKIGIMPANIFK GSVGIVSRSGTLTYEAVKQT+DAGLGQ+TAVGIGGDPVKGT+FI VLEMFLADP T SIIMIGEIGG++EEDAA+FIK EA KGRKKPMAGFIAG TAPPGRRMGHAGAII+GGKGKAEDK++AM+SAGIA+ADSPAALGTTL+KVL G
Sbjct:    1 MAILVDKNTKVICQGITGSQGTFHTQQAVAYGTQVVGGVTPGKGGAKHPDPKLANVPIFDTVMDARKKTGATATSIYVPPRFAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALDGSRSRLIGPNCPGVLTPNACKIGIMPANIFKAGSVGIVSRSGTLTYEAVKQTTDAGLGQSTAVGIGGDPVKGTDFIAVLEMFLADPATNSIIMIGEIGGASEEDAAEFIKSEAKKGRKKPMAGFIAGMTAPPGRRMGHAGAIIAGGKGKAEDKVDAMKSAGIAVADSPAALGTTLSKVLGG 299          
BLAST of mRNA_P-wetherbeei_contig10336.1.1 vs. uniprot
Match: A0A7C4XU37_9HYPH (Succinate--CoA ligase [ADP-forming] subunit alpha n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C4XU37_9HYPH)

HSP 1 Score: 507 bits (1305), Expect = 5.240e-180
Identity = 259/299 (86.62%), Postives = 281/299 (93.98%), Query Frame = 1
Query:    1 MAILVDKNTKVICQGITGSQGTFHTIQAMEYGTQVVGGVTPGKGGSKHPDAKLAGVPIFDTVAEAKAKSGATATSIYVPPPYAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALAGSWSRLIGPNCPGVLTPNACKIGIMPANIFKKGSVGIVSRSGTLTYEAVKQTSDAGLGQTTAVGIGGDPVKGTEFIDVLEMFLADPETTSIIMIGEIGGSAEEDAADFIKREAAKGRKKPMAGFIAGATAPPGRRMGHAGAIISGGKGKAEDKIEAMRSAGIAIADSPAALGTTLAKVLKG 897
            MAILVDKNT+VICQGITG+QGTFHT+QA+EYGT++VGGVTPGKGG++HP+ KLA VPIFDTV EAK K+GATA+SIYVPP YAADAILEAIDAE+PLIV ITEGIPV+DMV+VKRALAGS SRLIGPNCPGVLTP  CKIGIMP NIFKKG VGIVSRSGTLTYEAVKQT+DAGLGQ+TAVGIGGDPVKGTEFIDVL+MFL+DP T SIIMIGEIGGSAEEDAA+FI REA KGR KPMAGFIAG TAPPGRRMGHAGAII+GGKGKAEDK+EAMR+AGIAIADSPAALGTTL KVLKG
Sbjct:    1 MAILVDKNTRVICQGITGAQGTFHTVQALEYGTRIVGGVTPGKGGTRHPEPKLASVPIFDTVLEAKQKTGATASSIYVPPAYAADAILEAIDAEMPLIVAITEGIPVMDMVRVKRALAGSKSRLIGPNCPGVLTPEECKIGIMPGNIFKKGDVGIVSRSGTLTYEAVKQTTDAGLGQSTAVGIGGDPVKGTEFIDVLDMFLSDPATRSIIMIGEIGGSAEEDAAEFISREAKKGRSKPMAGFIAGVTAPPGRRMGHAGAIIAGGKGKAEDKLEAMRAAGIAIADSPAALGTTLLKVLKG 299          
BLAST of mRNA_P-wetherbeei_contig10336.1.1 vs. uniprot
Match: A0A6N6T472_9HYPH (Succinate--CoA ligase [ADP-forming] subunit alpha n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6T472_9HYPH)

HSP 1 Score: 505 bits (1300), Expect = 3.140e-179
Identity = 259/297 (87.21%), Postives = 279/297 (93.94%), Query Frame = 1
Query:    1 MAILVDKNTKVICQGITGSQGTFHTIQAMEYGTQVVGGVTPGKGGSKHPDAKLAGVPIFDTVAEAKAKSGATATSIYVPPPYAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALAGSWSRLIGPNCPGVLTPNACKIGIMPANIFKKGSVGIVSRSGTLTYEAVKQTSDAGLGQTTAVGIGGDPVKGTEFIDVLEMFLADPETTSIIMIGEIGGSAEEDAADFIKREAAKGRKKPMAGFIAGATAPPGRRMGHAGAIISGGKGKAEDKIEAMRSAGIAIADSPAALGTTLAKVL 891
            MAIL+D +TKVICQG TGSQGTFHT QA+ YGT+VVGGVTPGKGG+KHPD KLAGVPIFDTV +AK K+GATATSIYVPP +AADAILEAIDAEI LIVCITEGIPVLDMVKVKRAL GS SRL+GPNCPGVLTPN CKIGIMPANIF  G+VGIVSRSGTLTYEAVKQT+DAGLGQ+TAVGIGGDPVKGTEFIDVLEMFLADP TTSIIMIGEIGGSAEEDAADFI+ EA +GRKKPMAGFIAG TAPPGRRMGHAGAIISGGKGKAEDK+EAM+SAGIA+ADSPA+LGTTL++VL
Sbjct:    1 MAILIDSSTKVICQGFTGSQGTFHTQQALAYGTKVVGGVTPGKGGTKHPDPKLAGVPIFDTVLDAKKKTGATATSIYVPPRFAADAILEAIDAEIELIVCITEGIPVLDMVKVKRALGGSMSRLVGPNCPGVLTPNQCKIGIMPANIFSAGTVGIVSRSGTLTYEAVKQTTDAGLGQSTAVGIGGDPVKGTEFIDVLEMFLADPATTSIIMIGEIGGSAEEDAADFIRSEAKRGRKKPMAGFIAGTTAPPGRRMGHAGAIISGGKGKAEDKVEAMQSAGIAVADSPASLGTTLSRVL 297          
BLAST of mRNA_P-wetherbeei_contig10336.1.1 vs. uniprot
Match: A0A7Y4XIL3_HYPSQ (Succinate--CoA ligase [ADP-forming] subunit alpha n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y4XIL3_HYPSQ)

HSP 1 Score: 501 bits (1291), Expect = 7.110e-178
Identity = 255/299 (85.28%), Postives = 279/299 (93.31%), Query Frame = 1
Query:    1 MAILVDKNTKVICQGITGSQGTFHTIQAMEYGTQVVGGVTPGKGGSKHPDAKLAGVPIFDTVAEAKAKSGATATSIYVPPPYAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALAGSWSRLIGPNCPGVLTPNACKIGIMPANIFKKGSVGIVSRSGTLTYEAVKQTSDAGLGQTTAVGIGGDPVKGTEFIDVLEMFLADPETTSIIMIGEIGGSAEEDAADFIKREAAKGRKKPMAGFIAGATAPPGRRMGHAGAIISGGKGKAEDKIEAMRSAGIAIADSPAALGTTLAKVLKG 897
            MAIL+DK TKVICQGITGSQGTFHT QA EYGT++VGGVTPGKGGSKHPDA LA VP+FD+VAEA AK+GA ATSIYVPPP+AADAILEAIDAEIPLIVCITEGIPVLDMVKVKRAL GS SRL+GPNCPG+LTPN CKIGIMP NIFK G+VGIVSRSGTLTYEAVKQT+D GLGQTTAVGIGGDPVKGTEFID+L++FL+D ET SIIMIGEIGGSAEEDAA+F++REAAKGRKKPMAGFIAG TAPPGRRMGHAGAIISGGKGKAEDK+EAMR+AG+AI+ SPA LG TL +VL+G
Sbjct:    1 MAILIDKQTKVICQGITGSQGTFHTKQAKEYGTKIVGGVTPGKGGSKHPDADLADVPLFDSVAEAVAKTGANATSIYVPPPFAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALGGSKSRLVGPNCPGILTPNQCKIGIMPGNIFKHGTVGIVSRSGTLTYEAVKQTTDVGLGQTTAVGIGGDPVKGTEFIDMLDLFLSDKETQSIIMIGEIGGSAEEDAAEFLRREAAKGRKKPMAGFIAGVTAPPGRRMGHAGAIISGGKGKAEDKLEAMRAAGVAISPSPAELGKTLLEVLRG 299          
BLAST of mRNA_P-wetherbeei_contig10336.1.1 vs. uniprot
Match: A0A1E4CSQ6_9HYPH (Succinate--CoA ligase [ADP-forming] subunit alpha n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4CSQ6_9HYPH)

HSP 1 Score: 501 bits (1289), Expect = 1.430e-177
Identity = 253/298 (84.90%), Postives = 276/298 (92.62%), Query Frame = 1
Query:    1 MAILVDKNTKVICQGITGSQGTFHTIQAMEYGTQVVGGVTPGKGGSKHPDAKLAGVPIFDTVAEAKAKSGATATSIYVPPPYAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALAGSWSRLIGPNCPGVLTPNACKIGIMPANIFKKGSVGIVSRSGTLTYEAVKQTSDAGLGQTTAVGIGGDPVKGTEFIDVLEMFLADPETTSIIMIGEIGGSAEEDAADFIKREAAKGRKKPMAGFIAGATAPPGRRMGHAGAIISGGKGKAEDKIEAMRSAGIAIADSPAALGTTLAKVLK 894
            MAILVDK+TKVICQGITGSQGTFHT  A  YGTQ+VGGVTPG+GGSKHPD +LA VPIFDTV +A+  +GATATSIYVPPPYAADAILEAIDAE PLI+CITEGIPV+DM+KVKRAL GSWSRLIGPNCPGVLTPN CKIGIMP NIFKKG+VGIVSRSGTLTYEAVKQTSDAGLGQ+TAVGIGGDPVKGT+FIDVL+MFL+D ET +IIMIGEIGGS+EEDA +FI+REAAKGR KPMAGFIAG+TAPPGRRMGHAGAIISGGKGKAEDK EAMR+AGIA+ADSPA+LGTTL    K
Sbjct:    1 MAILVDKSTKVICQGITGSQGTFHTKAAKAYGTQIVGGVTPGRGGSKHPDPELADVPIFDTVKQAREATGATATSIYVPPPYAADAILEAIDAEFPLIICITEGIPVMDMIKVKRALTGSWSRLIGPNCPGVLTPNQCKIGIMPGNIFKKGNVGIVSRSGTLTYEAVKQTSDAGLGQSTAVGIGGDPVKGTDFIDVLDMFLSDAETEAIIMIGEIGGSSEEDACEFIRREAAKGRSKPMAGFIAGSTAPPGRRMGHAGAIISGGKGKAEDKFEAMRAAGIAVADSPASLGTTLLAAAK 298          
BLAST of mRNA_P-wetherbeei_contig10336.1.1 vs. uniprot
Match: A0A7C2RET4_9HYPH (Succinate--CoA ligase [ADP-forming] subunit alpha n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2RET4_9HYPH)

HSP 1 Score: 500 bits (1287), Expect = 3.870e-177
Identity = 256/299 (85.62%), Postives = 276/299 (92.31%), Query Frame = 1
Query:    1 MAILVDKNTKVICQGITGSQGTFHTIQAMEYGTQVVGGVTPGKGGSKHPDAKLAGVPIFDTVAEAKAKSGATATSIYVPPPYAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALAGSWSRLIGPNCPGVLTPNACKIGIMPANIFKKGSVGIVSRSGTLTYEAVKQTSDAGLGQTTAVGIGGDPVKGTEFIDVLEMFLADPETTSIIMIGEIGGSAEEDAADFIKREAAKGRKKPMAGFIAGATAPPGRRMGHAGAIISGGKGKAEDKIEAMRSAGIAIADSPAALGTTLAKVLKG 897
            MAILVDKNTKVICQGITGSQGTFHT QA+ YGTQ+VGGVTPGKGG++HPD KLA VPIFDTV EA+ K+GATATSIYVPP +AADAILEAIDAEIPLIVCITEGIPVLDMVKVKRAL GS SRLIGPNCPG LTPN CKIGIMP NIFK G VGIVSRSGTLTYEAVKQT+DAGLGQ+TAVGIGGDPVKGTEFID+LEM LADP T +IIMIGEIGG+AEE+AA+FI+ EA KGR+KPMAGFIAG TAPPGRRMGHAGAIISGGKG+AEDK+EAM+ AGIA+ADSPAALGTTLAK L G
Sbjct:    1 MAILVDKNTKVICQGITGSQGTFHTQQALAYGTQIVGGVTPGKGGTRHPDPKLANVPIFDTVLEARQKTGATATSIYVPPRFAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALDGSRSRLIGPNCPGALTPNECKIGIMPGNIFKAGKVGIVSRSGTLTYEAVKQTTDAGLGQSTAVGIGGDPVKGTEFIDILEMILADPATNAIIMIGEIGGAAEENAAEFIRSEARKGRRKPMAGFIAGMTAPPGRRMGHAGAIISGGKGRAEDKVEAMKQAGIAVADSPAALGTTLAKALAG 299          
BLAST of mRNA_P-wetherbeei_contig10336.1.1 vs. uniprot
Match: A0A6I3KKC2_9HYPH (Succinate--CoA ligase [ADP-forming] subunit alpha n=3 Tax=Hyphomicrobium TaxID=81 RepID=A0A6I3KKC2_9HYPH)

HSP 1 Score: 495 bits (1275), Expect = 4.320e-175
Identity = 256/299 (85.62%), Postives = 276/299 (92.31%), Query Frame = 1
Query:    1 MAILVDKNTKVICQGITGSQGTFHTIQAMEYGTQVVGGVTPGKGGSKHPDAKLAGVPIFDTVAEAKAKSGATATSIYVPPPYAADAILEAIDAEIPLIVCITEGIPVLDMVKVKRALAGSWSRLIGPNCPGVLTPNACKIGIMPANIFKKGSVGIVSRSGTLTYEAVKQTSDAGLGQTTAVGIGGDPVKGTEFIDVLEMFLADPETTSIIMIGEIGGSAEEDAADFIKREAAKGRKKPMAGFIAGATAPPGRRMGHAGAIISGGKGKAEDKIEAMRSAGIAIADSPAALGTTLAKVLKG 897
            MAILVDK+TKV+CQG+TG+QGTFHT QAM YGT +VGGVTPGKGGSKHPD +LAGVP+FDTVAEA+A +GA ATSIYVPPP+AADAILEAIDA IP IV ITEGIPVLDMVKVKRAL GS SRL+GPNCPGVLTPN CKIGIMP NIF+ G VGIVSRSGTLTYEAVKQTSDAGLGQ+TAVGIGGDPVKG EFI+VL++FLADP+T SIIMIGEIGGSAEE+AA+FIKREA KGR KPMAGFIAG TAPPGRRMGHAGAIISGGKGKAEDK+EAMRSAGIAIA SPAALGTTL  VLKG
Sbjct:    1 MAILVDKSTKVLCQGVTGAQGTFHTKQAMAYGTTIVGGVTPGKGGSKHPDEELAGVPLFDTVAEARAATGADATSIYVPPPFAADAILEAIDAGIPFIVAITEGIPVLDMVKVKRALEGSGSRLLGPNCPGVLTPNECKIGIMPGNIFQAGRVGIVSRSGTLTYEAVKQTSDAGLGQSTAVGIGGDPVKGLEFIEVLDLFLADPKTDSIIMIGEIGGSAEEEAAEFIKREAKKGRSKPMAGFIAGGTAPPGRRMGHAGAIISGGKGKAEDKLEAMRSAGIAIAASPAALGTTLMGVLKG 299          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10336.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V4P9B4_9PLAN3.010e-18789.80Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A2W4L586_9PROT2.330e-18388.96Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A2W4RDE0_9PROT2.720e-18288.96Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A537R4P8_9PROT6.020e-18188.29Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A7C4XU37_9HYPH5.240e-18086.62Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A6N6T472_9HYPH3.140e-17987.21Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A7Y4XIL3_HYPSQ7.110e-17885.28Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A1E4CSQ6_9HYPH1.430e-17784.90Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A7C2RET4_9HYPH3.870e-17785.62Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]
A0A6I3KKC2_9HYPH4.320e-17585.62Succinate--CoA ligase [ADP-forming] subunit alpha ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10336contigP-wetherbeei_contig10336:1049..1948 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog717785.HYPMC_4526
Preferred namesucD
PFAMsCoA_binding,Ligase_CoA
Model size900
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00004,RC00014
KEGG koko:K01902
KEGG ReactionR00405,R02404
KEGG Pathwayko00020,ko00640,ko00660,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00640,map00660,map00720,map01100,map01110,map01120,map01130,map01200
KEGG ModuleM00009,M00011,M00173,M00374,M00620
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.72e-175
EggNOG OGsCOG0074@1|root,COG0074@2|Bacteria,1MUGA@1224|Proteobacteria,2TQKB@28211|Alphaproteobacteria,3N634@45401|Hyphomicrobiaceae
EC6.2.1.5
DescriptionSuccinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
Cds size900
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185864.2001913-CDS-P-wetherbeei_contig10336:1048..19481683185864.2001913-CDS-P-wetherbeei_contig10336:1048..1948Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10336 1049..1948 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10336.1.1prot_P-wetherbeei_contig10336.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10336 1049..1948 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10336.1.1

>prot_P-wetherbeei_contig10336.1.1 ID=prot_P-wetherbeei_contig10336.1.1|Name=mRNA_P-wetherbeei_contig10336.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=300bp
MAILVDKNTKVICQGITGSQGTFHTIQAMEYGTQVVGGVTPGKGGSKHPD
AKLAGVPIFDTVAEAKAKSGATATSIYVPPPYAADAILEAIDAEIPLIVC
ITEGIPVLDMVKVKRALAGSWSRLIGPNCPGVLTPNACKIGIMPANIFKK
GSVGIVSRSGTLTYEAVKQTSDAGLGQTTAVGIGGDPVKGTEFIDVLEMF
LADPETTSIIMIGEIGGSAEEDAADFIKREAAKGRKKPMAGFIAGATAPP
GRRMGHAGAIISGGKGKAEDKIEAMRSAGIAIADSPAALGTTLAKVLKG*
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mRNA from alignment at P-wetherbeei_contig10336:1049..1948-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10336.1.1 ID=mRNA_P-wetherbeei_contig10336.1.1|Name=mRNA_P-wetherbeei_contig10336.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=900bp|location=Sequence derived from alignment at P-wetherbeei_contig10336:1049..1948- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAATCCTCGTCGATAAGAATACCAAGGTCATCTGCCAGGGCATCAC CGGCAGCCAGGGTACGTTCCACACCATCCAGGCGATGGAGTACGGCACTC AGGTCGTGGGCGGCGTTACGCCGGGCAAGGGCGGCTCCAAGCATCCCGAT GCGAAGCTCGCGGGCGTACCGATCTTCGACACGGTCGCCGAGGCCAAGGC CAAGTCGGGGGCAACCGCCACCTCGATCTATGTGCCGCCCCCCTATGCCG CCGACGCCATCCTGGAAGCGATCGACGCGGAGATCCCGCTGATCGTCTGC ATCACCGAGGGCATCCCGGTGCTCGACATGGTGAAGGTCAAGCGGGCGCT GGCGGGTTCCTGGTCGCGGCTGATCGGGCCCAACTGCCCGGGCGTCCTCA CGCCCAACGCCTGCAAAATCGGCATCATGCCGGCCAATATATTCAAGAAA GGCTCGGTCGGCATCGTGTCGCGGTCGGGGACGCTGACCTATGAAGCGGT CAAGCAGACTTCCGACGCGGGCCTTGGCCAGACGACGGCCGTCGGCATCG GCGGCGATCCGGTGAAGGGGACCGAGTTCATCGACGTGCTCGAGATGTTC CTCGCCGATCCCGAAACGACCTCGATCATCATGATCGGCGAGATCGGCGG CTCGGCGGAAGAAGATGCGGCCGACTTCATCAAGCGTGAAGCGGCCAAGG GCCGCAAGAAGCCGATGGCGGGCTTCATCGCCGGTGCAACGGCCCCTCCA GGCCGCCGCATGGGTCACGCTGGCGCGATCATTTCCGGCGGCAAGGGCAA GGCCGAGGACAAGATCGAAGCGATGCGTTCCGCCGGCATCGCCATCGCCG ACAGCCCGGCCGCACTCGGCACGACGCTGGCGAAGGTCTTGAAGGGGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10336:1049..1948-

>mRNA_P-wetherbeei_contig10336.1.1 ID=mRNA_P-wetherbeei_contig10336.1.1|Name=mRNA_P-wetherbeei_contig10336.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=900bp|location=Sequence derived from alignment at P-wetherbeei_contig10336:1049..1948- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCAATCCTCGTCGATAAGAATACCAAGGTCATCTGCCAGGGCATCAC
CGGCAGCCAGGGTACGTTCCACACCATCCAGGCGATGGAGTACGGCACTC
AGGTCGTGGGCGGCGTTACGCCGGGCAAGGGCGGCTCCAAGCATCCCGAT
GCGAAGCTCGCGGGCGTACCGATCTTCGACACGGTCGCCGAGGCCAAGGC
CAAGTCGGGGGCAACCGCCACCTCGATCTATGTGCCGCCCCCCTATGCCG
CCGACGCCATCCTGGAAGCGATCGACGCGGAGATCCCGCTGATCGTCTGC
ATCACCGAGGGCATCCCGGTGCTCGACATGGTGAAGGTCAAGCGGGCGCT
GGCGGGTTCCTGGTCGCGGCTGATCGGGCCCAACTGCCCGGGCGTCCTCA
CGCCCAACGCCTGCAAAATCGGCATCATGCCGGCCAATATATTCAAGAAA
GGCTCGGTCGGCATCGTGTCGCGGTCGGGGACGCTGACCTATGAAGCGGT
CAAGCAGACTTCCGACGCGGGCCTTGGCCAGACGACGGCCGTCGGCATCG
GCGGCGATCCGGTGAAGGGGACCGAGTTCATCGACGTGCTCGAGATGTTC
CTCGCCGATCCCGAAACGACCTCGATCATCATGATCGGCGAGATCGGCGG
CTCGGCGGAAGAAGATGCGGCCGACTTCATCAAGCGTGAAGCGGCCAAGG
GCCGCAAGAAGCCGATGGCGGGCTTCATCGCCGGTGCAACGGCCCCTCCA
GGCCGCCGCATGGGTCACGCTGGCGCGATCATTTCCGGCGGCAAGGGCAA
GGCCGAGGACAAGATCGAAGCGATGCGTTCCGCCGGCATCGCCATCGCCG
ACAGCCCGGCCGCACTCGGCACGACGCTGGCGAAGGTCTTGAAGGGGTGA
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