mRNA_P-wetherbeei_contig10320.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: A0A6H5L1H9_9PHAE (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H9_9PHAE) HSP 1 Score: 135 bits (341), Expect = 8.770e-35 Identity = 82/200 (41.00%), Postives = 122/200 (61.00%), Query Frame = 1 Query: 70 GRESRGDAEDCPICLG-PCLLQVGTNCNHQFCAKCFLEYANSVRGLKIKCPCCRSEVNLLHQRKADA-TSGETE----ASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVLYIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYRVAL 648 GR +R +CPICL V TNC H FCA+C L Y + ++I+CP CR EV +LH DA +G+T+ A A + G+ ++ +I+ FN R +G RS Q + DAP+LLR L SD+ RGD R+F ++RR + LQ + LYI+SP+D +PE++VGI G LDD++V +F L++++++YR L Sbjct: 54 GRLARHPGGECPICLSIEVETPVQTNCGHWFCARCILSYYDQGGRVRIRCPMCRQEVTMLHGAAGDAQAAGDTDQAHDARAESAPAATTGSPEIQEEISRFNDRNSGRWRSPWQVIEDAPLLLRRLWSDLSRGDTRVFGELMRRGVQ----LQLFVAALYILSPIDVIPESLVGIAGLLDDLVVVVFLLLHLTSVYRTVL 249
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: A0A0P5FYD2_9CRUS (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5FYD2_9CRUS) HSP 1 Score: 110 bits (274), Expect = 8.440e-26 Identity = 74/192 (38.54%), Postives = 105/192 (54.69%), Query Frame = 1 Query: 73 RESRGDAEDCPICLGPCLLQVGTNCNHQFCAKCFLEYA--NSVRGLKIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVLYIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 639 R G CP+CL +V TNC H FC KC+L Y S G ++CP CR +V +L Q + T S E GT R+I +N RY+G R +TVR+ PIL R+L+S+I G ++ LR VS ++ C V+Y++SP+D +PEA GILG +DD+LV L V+++ +YR Sbjct: 63 RRRYGSQNQCPVCLNDIAYEVETNCGHIFCCKCWLAYRAHGSFLGA-VRCPVCRQQVTILFQCFTENELNPTSGSEEEPEL---GT--FIREINSYNRRYSGEPRQFWETVRELPILFRHLVSEIFSEGGFLYLYRLR---VSLLVIGC---VIYLLSPLDIIPEAAFGILGLVDDMLVLLVVSVFLTNVYR 242
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: E9H0E3_DAPPU (E3 ubiquitin-protein ligase RNF170 (Fragment) n=4 Tax=Daphnia TaxID=6668 RepID=E9H0E3_DAPPU) HSP 1 Score: 107 bits (267), Expect = 4.190e-25 Identity = 68/192 (35.42%), Postives = 104/192 (54.17%), Query Frame = 1 Query: 73 RESRGDAEDCPICLGPCLLQVGTNCNHQFCAKCFLEYA--NSVRGLKIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVLYIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 639 R G CP+CL +V TNC H FC +C+L Y S G ++CP CR +V +L Q + E E + A G R+I +N RY+G R + +R+ P+L R++LS++ G ++ LR VS ++ C V+Y++SP+D +PEA G+LG +DD+LV L V+I+ +YR Sbjct: 24 RRRYGQQNQCPVCLNDIEYEVETNCGHIFCCRCWLAYRAHGSFLGA-VRCPVCRQQVTILFQGFS-----ENELNPASGSDEEPDLATFIREINSYNRRYSGEPRPFWENIRELPVLFRHILSEVFSEGGFLYLYRLR---VSLLVIGC---VIYLLSPLDIIPEAAFGLLGLVDDLLVLLVVAVFITNVYR 203
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: UPI001939D670 (E3 ubiquitin-protein ligase RNF170-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939D670) HSP 1 Score: 107 bits (268), Expect = 5.770e-25 Identity = 70/182 (38.46%), Postives = 97/182 (53.30%), Query Frame = 1 Query: 100 CPICLGPCLLQVGTNCNHQFCAKCFLEYANSVRGL-KIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVLYIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 639 CPICL L V TNC H FCA C + Y L + CP CR +V+LL R A +EA TR +I +N R++G R + +RD P L+R+L S+ G +F +R L + +L LY++SP+DFLPEAV GI+G LDDV V + L+Y++ +YR Sbjct: 92 CPICLQEARLPVETNCGHLFCAHCIITYWRFGNWLGAVNCPVCRQQVSLL-LRNFQAGENHSEA-----------TRDALTNINDYNRRFSGQPRPILDYIRDIPALMRHLWSEFFSMGGLVFMFRVRIVLCAIAIL------LYLISPLDFLPEAVFGIIGLLDDVFVLMLVLIYMTVIYR 255
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: A0A5A9P4R7_9TELE (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9P4R7_9TELE) HSP 1 Score: 107 bits (267), Expect = 1.060e-24 Identity = 73/183 (39.89%), Postives = 99/183 (54.10%), Query Frame = 1 Query: 100 CPICLGPCLLQVGTNCNHQFCAKCFLEYANSVRGL-KIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVL-YIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 639 CP+CL +L V TNC H FC C + Y L I CP CR V LL D TSG A T +G+ + + DI +N R++G RSL +RD P LLR+ ++ G + +R +L CL+G L Y+VSP+DF+PE VVG+LG++DD V L +YIS +YR Sbjct: 88 CPVCLQQAVLPVETNCGHLFCGPCIVAYWRYGTWLGAINCPICRQMVTLLFPLFHD-TSGS--ARTQDGQVEA---AQIVNDIDDYNRRFSGQPRSLVDRLRDVPTLLRHAFREMFSVGGLFWMFRIR-------ILLCLVGALTYLVSPLDFIPEGVVGLLGFMDDFFVILLLFIYISIMYR 257
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: A0A671M8Z7_9TELE (E3 ubiquitin-protein ligase RNF170 n=7 Tax=Sinocyclocheilus TaxID=75365 RepID=A0A671M8Z7_9TELE) HSP 1 Score: 106 bits (265), Expect = 1.230e-24 Identity = 68/183 (37.16%), Postives = 94/183 (51.37%), Query Frame = 1 Query: 100 CPICLGPCLLQVGTNCNHQFCAKCFLEYANSVRGL-KIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVL-YIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 639 CP+CL LL V TNC H FC C + Y L I CP CR V LL D + E + + RDI +N R++G RSL + +RD P LLR+ ++ G + +R +L C+LG L Y+ SP+DF+PE V+G+LG++DD V L +YIS +YR Sbjct: 77 CPVCLQQALLPVETNCGHLFCGPCIVAYWRYGTWLGSISCPICRQTVTLLFPLFRDTGGAQVEPAL------------ILRDIHDYNRRFSGQPRSLLERLRDVPTLLRHAFREMFSVGGLFWMFRVR-------ILLCVLGALMYLASPLDFIPEGVLGLLGFMDDFFVILLLFIYISIMYR 240
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: K1QDR4_CRAGI (E3 ubiquitin-protein ligase RNF170 n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1QDR4_CRAGI) HSP 1 Score: 106 bits (264), Expect = 1.850e-24 Identity = 68/183 (37.16%), Postives = 92/183 (50.27%), Query Frame = 1 Query: 97 DCPICLGPCLLQVGTNCNHQFCAKCFLEYANSVRGL-KIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVLYIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 639 DCP+CLG + TNC H FC C + Y L ++CP CR +V LL D + AS E + IA +N R++G R L +RD P LLR+ L + G I+ LR + L +LY +SP+D +PEAV GILG+LDD+ V L +YIS +YR Sbjct: 75 DCPVCLGNTQYGIETNCGHIFCGTCIITYWEHGTWLGAVRCPVCRQQVTLLLVHFTDEEQNQPSASKTE----------ILNKIADYNRRFSGEPRPLMDYLRDLPTLLRHALREFFSVGGLIWMFRLRIIAIF------LAALLYFISPLDIIPEAVFGILGFLDDLFVLLLLAIYISIIYR 241
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: W5M630_LEPOC (E3 ubiquitin-protein ligase RNF170 n=3 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5M630_LEPOC) HSP 1 Score: 106 bits (264), Expect = 2.470e-24 Identity = 69/189 (36.51%), Postives = 95/189 (50.26%), Query Frame = 1 Query: 100 CPICLGPCLLQVGTNCNHQFCAKCFLEYANSVRGL-KIKCPCCRSEVNLL------HQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVL-YIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 639 CP+CL L V TNC H FC C + Y L I CP CR V LL H A G+ EA + +D+ +N R++G RSL +RD P LLR+ ++ G + +R +L CL+G L Y+ SP+DF+PEA+ GILG++DD+ V L +YIS +YR Sbjct: 88 CPVCLQQASLPVETNCGHLFCGSCIIAYWRYGSWLGAINCPICRQMVTLLFPLFHEHDLPAQTQEGQPEAGQ------------ILQDVYDYNRRFSGQPRSLMDRIRDVPTLLRHAFREMFSVGGLFWMFRIR-------ILLCLIGALTYLASPLDFIPEALFGILGFMDDLFVILLLFIYISIMYR 257
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: H3AD78_LATCH (E3 ubiquitin-protein ligase RNF170 n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AD78_LATCH) HSP 1 Score: 103 bits (258), Expect = 2.470e-24 Identity = 67/183 (36.61%), Postives = 94/183 (51.37%), Query Frame = 1 Query: 100 CPICLGPCLLQVGTNCNHQFCAKCFLEYANSVRGL-KIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRAVERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLG-VLYIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 639 CP+CL V TNC H FC C + Y L I CP CR V LL + + + E A R + R++ +N R++G RSL + D P LLR+ ++ G + +R +L CL+G +LY+ SP+DFLPEA+ GILG+LDD+ V L+YIS +YR Sbjct: 3 CPVCLQQATFPVETNCGHLFCGPCIIAYWTYGSWLGAISCPICRQTVTLLFPLFQEESQQQDEQQDA---------REILRNVNDYNRRFSGQPRSLMDRIMDLPTLLRHAFREMFSVGGLFWMFRIR-------ILLCLMGALLYLASPLDFLPEALFGILGFLDDLFVIFLLLIYISIMYR 169
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Match: A0A673ZI15_SALTR (E3 ubiquitin-protein ligase RNF170 n=3 Tax=Salmoninae TaxID=504568 RepID=A0A673ZI15_SALTR) HSP 1 Score: 105 bits (263), Expect = 2.590e-24 Identity = 69/186 (37.10%), Postives = 98/186 (52.69%), Query Frame = 1 Query: 100 CPICLGPCLLQVGTNCNHQFCAKCFLEYANSVRGL-KIKCPCCRSEVNLLHQRKADATSGETEASTAEGRATSDGTRA---VERDIAHFNTRYAGA-RSLGQTVRDAPILLRYLLSDIVRGDGRIFAIMLRRTLVSYQLLQCLLGVL-YIVSPVDFLPEAVVGILGYLDDVLVFLFALVYISTLYR 639 CP+CL +L V TNC H FC C + Y L I CP CR V LL + S + DGT + RD++ +N R++G RSL +RD P LLR+L ++ G + +R +L CL+G L Y++SP+DF+PEA+ G+LG+LDD + L +YIS +YR Sbjct: 74 CPVCLQQAVLPVETNCGHLFCGSCIIAYWRYGTWLGAISCPICRQMVTLLFPLFHEQVSPQQ---------VQDGTVEPLFILRDLSDYNRRFSGQPRSLMDRLRDVPTLLRHLFREMFSVGGLFWMFRIR-------VLLCLIGALTYLISPLDFIPEALFGLLGFLDDFFIILLLFIYISIMYR 243 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10320.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10320.1.1 >prot_P-wetherbeei_contig10320.1.1 ID=prot_P-wetherbeei_contig10320.1.1|Name=mRNA_P-wetherbeei_contig10320.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp QNRRAASSYHRSRSQEEEEQLGRGRESRGDAEDCPICLGPCLLQVGTNCNback to top mRNA from alignment at P-wetherbeei_contig10320:362..1488+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10320.1.1 ID=mRNA_P-wetherbeei_contig10320.1.1|Name=mRNA_P-wetherbeei_contig10320.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1127bp|location=Sequence derived from alignment at P-wetherbeei_contig10320:362..1488+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10320:362..1488+ >mRNA_P-wetherbeei_contig10320.1.1 ID=mRNA_P-wetherbeei_contig10320.1.1|Name=mRNA_P-wetherbeei_contig10320.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig10320:362..1488+ (Phaeothamnion wetherbeei SAG_119_79)back to top |