mRNA_P-wetherbeei_contig10318.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10318.1.1
Unique NamemRNA_P-wetherbeei_contig10318.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10318.1.1 vs. uniprot
Match: A0A2N3EEX0_9PROT (DNA primase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3EEX0_9PROT)

HSP 1 Score: 469 bits (1207), Expect = 1.520e-157
Identity = 244/435 (56.09%), Postives = 316/435 (72.64%), Query Frame = 1
Query:    1 MQFDRNFVDELKARVKLSDVVGRKLRLIRRGREFVALSPFSNEKSPSFTINDDKGFYHCFSSGKHGDAITFLMETESLTFQEAVARLAEDMGMELPKASFQDSHEARTKQAQRVTLYGVMQQAAVFFAAQLTGPAGADARAYLDKRQVPTALRQTMGLGFAP----SARTLLCDTLTRAGVTPEQLVEAGLAIKPDNGGAIYDRFRDRIMFPITDNSDRVIAFGGRAMSADAQAKYLNSPETPLFHKGNVLYNLANARRALQAPIKGQGRDTLIVTEGYMDVIALTRAGIPNAVAPLGTALTEAQMAMLWRLTPEPVLCFDGDAAGMRAMLRVVERALPLLEPGRSLRFVLLPDGLDPDDIIARQGGAAMEGYLATPLPLADILWSAETSRLPMDTPERRAGLEQRLQALLETIADPSVRKYYQNDIRQRISNLF 1293
            M F ++F+DELK R+++S+VVGRK++L RRGREFV LSPFSNEKSPSFT+NDDK FYHCFSSG+HGD I+F+ +TE+L+F EAV RLA + GME+PK   +D+HEA+ ++ +  TL  VM+ AA FF  +L   AGA+ARAYL++R +     +  G+G+AP    + R  L   L    VT EQ+ EAGL I   +    YDRFR+R++FPI D   RVIAFGGRA++ADA+AKYLNSP+TPLFHKG VLYNLA AR+    P   +G  T+I  EGYMDV+ L + GI +AVAPLGTALTE Q+A+LWR+ PEP+LCFDGD AG+RA  R VER LPLL+PG SLRF LLP+G DPDD++  +G AAM   L    PLA+++W  E +    DTPERRA LE R++A++  I DP VR +Y  D+R R++ +F
Sbjct:    1 MSFPKSFLDELKGRIRVSEVVGRKVKLTRRGREFVGLSPFSNEKSPSFTVNDDKQFYHCFSSGEHGDIISFIEKTENLSFLEAVERLAAEAGMEMPK---RDAHEAQ-REKEAATLIDVMEMAAQFFRQKLQEGAGAEARAYLERRGMKGKTLEDFGVGYAPGDDRAERMALMRYLKSRDVTLEQMAEAGLVIHGPDIAEPYDRFRNRVIFPIADARGRVIAFGGRALAADAKAKYLNSPDTPLFHKGRVLYNLARARK----PSHDEG--TVIAVEGYMDVVGLAQGGIDHAVAPLGTALTEDQIALLWRMAPEPILCFDGDKAGLRAAYRAVERVLPLLKPGHSLRFALLPEGKDPDDLVREEGSAAMRAVLDAARPLAEMVWEKEVAAGTWDTPERRAALETRVEAVVGMIGDPKVRGHYAEDLRGRVARMF 425          
BLAST of mRNA_P-wetherbeei_contig10318.1.1 vs. uniprot
Match: A7HVJ7_PARL1 (DNA primase n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) TaxID=402881 RepID=A7HVJ7_PARL1)

HSP 1 Score: 469 bits (1206), Expect = 1.620e-157
Identity = 254/455 (55.82%), Postives = 321/455 (70.55%), Query Frame = 1
Query:    1 MQFDRNFVDELKARVKLSDVVGRKLRLIRRGREFVALSPFSNEKSPSFTINDDKGFYHCFSSGKHGDAITFLMETESLTFQEAVARLAEDMGMELPKASFQDSHEARTKQAQRVTLYGVMQQAAVFFAAQLTGPAGADARAYLDKRQVPTALRQTMGLGFAP----SARTLLCDTLTRAGVTPEQLVEAGLAIKPDNGGAIYDRFRDRIMFPITDNSDRVIAFGGRAMSADAQAKYLNSPETPLFHKGNVLYNLANARRALQAPIKGQGRDTLIVTEGYMDVIALTRAGIPNAVAPLGTALTEAQMAMLWRLTPEPVLCFDGDAAGMRAMLRVVERALPLLEPGRSLRFVLLPDGLDPDDIIARQGGAAMEGYLATPLPLADILWSAETSRLPMDTPERRAGLEQRLQALLETIADPSVRKYYQNDIRQRISNLFRPAHVSSKSQQPAFTGQKRF 1353
            M F + F+DELK R+++S+VVGRK++LIRRGREFV LSPFSNEKSPSFT+NDDK F+HCFSSG+HGD I FL +TE+L+F EAV RLA + GME+PK   +DS  A  ++ +  TL  VM+ AA FF  +L   AGA+ARAYLD+R +        G+G+AP    + RT L   L    VT EQ+ EAGL I   +    +DRFR+R+MFPI D   RVIAFGGRA+++DA+AKYLNSP+TPLFHKG VLYNL  AR+    P   +G  T+I  EGYMDVI L++ GI NAVAPLGTALTE Q+A+LWR+ PEP+LCFDGD AG+RA  R VER LPLL+PG SLRF LLP+G DPDD++  +GG AM   LA   PLA+++W  E S    DTPERRA LE  L+A + TI+DP VR +Y +++R ++   F     S++  Q A  GQ RF
Sbjct:    1 MSFPKAFLDELKGRIRVSEVVGRKVKLIRRGREFVGLSPFSNEKSPSFTVNDDKQFFHCFSSGEHGDVIKFLEKTENLSFIEAVERLAAEAGMEMPK---RDSFVAE-REKEAATLIDVMEMAAQFFRQKLQEGAGAEARAYLDRRGMKAKTLDDFGVGYAPGDERADRTALMRYLKSRDVTQEQMAEAGLIISGPDIREPHDRFRNRVMFPIADARGRVIAFGGRALASDAKAKYLNSPDTPLFHKGRVLYNLNRARK----PAYDEG--TVIAVEGYMDVIGLSQGGIDNAVAPLGTALTEDQIALLWRMAPEPILCFDGDKAGLRAAYRAVERVLPLLKPGHSLRFALLPEGKDPDDLVREEGGQAMRDILAKARPLAEMVWEKEISAGQWDTPERRAKLEADLEAAVATISDPKVRGHYSDNLRAKVQQFF---GGSARGGQRAGLGQNRF 442          
BLAST of mRNA_P-wetherbeei_contig10318.1.1 vs. uniprot
Match: A0A3B8XWC7_9HYPH (DNA primase n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A3B8XWC7_9HYPH)

HSP 1 Score: 468 bits (1205), Expect = 2.940e-157
Identity = 252/436 (57.80%), Postives = 310/436 (71.10%), Query Frame = 1
Query:    1 MQFDRNFVDELKARVKLSDVVGRKLRLIRRGREFVALSPFSNEKSPSFTINDDKGFYHCFSSGKHGDAITFLMETESLTFQEAVARLAEDMGMELPKASFQDSHEA-RTKQAQRVTLYGVMQQAAVFFAAQLTGPAGADARAYLDKRQVPTALRQTMGLGFAPSA----RTLLCDTLTRAGVTPEQLVEAGLAIKPDNGGAIYDRFRDRIMFPITDNSDRVIAFGGRAMSADAQAKYLNSPETPLFHKGNVLYNLANARRALQAPIKGQGRDTLIVTEGYMDVIALTRAGIPNAVAPLGTALTEAQMAMLWRLTPEPVLCFDGDAAGMRAMLRVVERALPLLEPGRSLRFVLLPDGLDPDDIIARQGGAAMEGYLATPLPLADILWSAETSRLPMDTPERRAGLEQRLQALLETIADPSVRKYYQNDIRQRISNLF 1293
            M F + F+DELK R+++S+VVGRK++L RRGREFV LSPFSNEKSPSFT+NDDK FYHCFSSG+HGD I FL +TE+L+F EAV RLA + GME+P+   +D+H A R K+A   TL  VM+ AA FF  +L    GA+ARAYL++R +        G+G+AP      RT L   L    VT +Q+VEAGL I   +    YDRFR+R+MFPI D   RVIAFGGRA+SADA+AKYLNSPETPLFHKG VLYNLA AR+    P   +G  T+I  EGYMDV+ L + GI NAVAPLGTALTE Q+ +LWR+ PEP+LCFDGD AG+RA  R VER LPLL+PG SLRF LLP+G DPDD++  +GG AM   LA   PL+++LW  ETS    DTPERRA LE  L+A +  I DP VR +Y   +R+R+S  F
Sbjct:    1 MSFPKGFLDELKGRIRVSEVVGRKVKLTRRGREFVGLSPFSNEKSPSFTVNDDKQFYHCFSSGEHGDVIKFLEKTENLSFIEAVERLAAEAGMEMPE---RDAHAAQRDKEA--ATLIDVMEMAAQFFRQKLQEGVGAEARAYLERRGMRGKTIDDFGIGYAPGDDRGDRTSLLKYLKSKNVTLDQMVEAGLVISGADIAEPYDRFRNRVMFPIADARGRVIAFGGRALSADAKAKYLNSPETPLFHKGRVLYNLARARK----PAHDEG--TVIAVEGYMDVVGLAQGGIYNAVAPLGTALTEDQIQLLWRMAPEPILCFDGDKAGLRAAYRAVERVLPLLKPGHSLRFALLPEGKDPDDLVREEGGDAMREVLAKARPLSEMLWEKETSTGQWDTPERRAKLEADLEAAVAAIGDPKVRAHYAEALRERVSKFF 425          
BLAST of mRNA_P-wetherbeei_contig10318.1.1 vs. uniprot
Match: UPI0019148B8B (DNA primase n=1 Tax=Rhodothalassium salexigens TaxID=1086 RepID=UPI0019148B8B)

HSP 1 Score: 455 bits (1171), Expect = 6.060e-155
Identity = 239/434 (55.07%), Postives = 300/434 (69.12%), Query Frame = 1
Query:    1 MQFDRNFVDELKARVKLSDVVGRKLRLIRRGREFVALSPFSNEKSPSFTINDDKGFYHCFSSGKHGDAITFLMETESLTFQEAVARLAEDMGMELPKASFQDSHEARTKQAQRVTLYGVMQQAAVFFAAQLTGPAGADARAYLDKRQVPTALRQTMGLGFAPSARTLLCDTLTRAGVTPEQLVEAGLAIKPDNGGAIYDRFRDRIMFPITDNSDRVIAFGGRAMSADAQAKYLNSPETPLFHKGNVLYNLANARRALQAPIKGQGRDT--LIVTEGYMDVIALTRAGIPNAVAPLGTALTEAQMAMLWRLTPEPVLCFDGDAAGMRAMLRVVERALPLLEPGRSLRFVLLPDGLDPDDIIARQGGAAMEGYLATPLPLADILWSAETSRLPMDTPERRAGLEQRLQALLETIADPSVRKYYQNDIRQRISNLFR 1296
            M+F   F+DE++ RV L+DV+GR ++L+R GRE+  L PF NEK+PSF +  +KGFYHCF  G  GD ITFL + E L+F EAV RLA + G++LPK       E   ++A+  +L+ VM+ AA ++ AQLTGP G +ARAYLD+R V  A  +   LG AP+ RT L + L+  GV+  Q+VEAGL I+P++GGA YDRFR+R+MFPI D   RVIAFGGRA+   A+AKYLNSPETPLFHKG+ LYNL  ARRA          DT  ++V EGYMDVIAL  AGI  AVAPLGTALT  Q+ +LWRL PEPVLCFDGD+AG+RA  R +ERALP+L+PG SL F LLP+G DPDD++ R G  AM   L    PL D+LW  ET+   +DTPERRAG E++L A L  I D  VR +Y  +I  R   LFR
Sbjct:    1 MRFPPRFLDEIRERVPLADVIGRSVKLVRAGREYKGLCPFHNEKTPSFHVIPEKGFYHCFGCGASGDVITFLTDHEGLSFPEAVERLAGEAGLDLPKPD----PETERREARAASLHDVMETAARWYQAQLTGPGGREARAYLDRRGVSAASVEGFRLGVAPAQRTALKEALSARGVSEAQMVEAGLLIRPEDGGASYDRFRNRLMFPIADGRGRVIAFGGRALDGHAKAKYLNSPETPLFHKGHALYNLDKARRATH--------DTREIVVVEGYMDVIALADAGIAQAVAPLGTALTPEQLTLLWRLVPEPVLCFDGDSAGLRAAHRAIERALPVLKPGASLSFALLPEGQDPDDLVRRSGPEAMRRLLDRATPLVDLLWRFETAEARLDTPERRAGAERQLFAKLAEIEDEKVRHFYNKEIGARFRRLFR 422          
BLAST of mRNA_P-wetherbeei_contig10318.1.1 vs. uniprot
Match: A0A6N6VCN0_9HYPH (DNA primase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VCN0_9HYPH)

HSP 1 Score: 462 bits (1188), Expect = 8.410e-155
Identity = 243/448 (54.24%), Postives = 309/448 (68.97%), Query Frame = 1
Query:    1 MQFDRNFVDELKARVKLSDVVGRKLRLIRRGREFVALSPFSNEKSPSFTINDDKGFYHCFSSGKHGDAITFLMETESLTFQEAVARLAEDMGMELPKASFQDSHEARTKQAQRVTLYGVMQQAAVFFAAQLTGPAGADARAYLDKRQVPTALRQTMGLGFAPSARTLLCDTLTRAGVTPEQLVEAGLAIKPDNGGAIYDRFRDRIMFPITDNSDRVIAFGGRAMSADAQAKYLNSPETPLFHKGNVLYNLANARRALQAPIKGQGRDTLIVTEGYMDVIALTRAGIPNAVAPLGTALTEAQMAMLWRLTPEPVLCFDGDAAGMRAMLRVVERALPLLEPGRSLRFVLLPDGLDPDDIIARQGGAAMEGYLATPLPLADILWSAETSRLPMDTPERRAGLEQRLQALLETIADPSVRKYYQNDIRQRISNLFRPAHVSSKSQQPAFTGQ 1344
            M F + F+DELKAR+++S+VVGRK++LIRRGREFV LSPF+NEKSPSFT+NDDK F+HCFSSG+HGD I FL +TE+L+F EAV RLA + G+E+P+   +D H    +  +  +L  VM+ AA FF  +L    GA+ARAYLD+R +     +  GLG+AP  R  L   LT  GV   Q+ EAGL I   +    YDRFR+R+MFPI D   R IAFGGRA+ ++A+AKYLNSPETPLFHKG  LYNL  AR+    P    G  T+I  EGYMDVI + + GI NAVAPLGTALTE Q+ ++WR+ PEP+LCFDGD AG+RA  R VER LPLL+PG SLRF +LP G DPDD++  +GG AM   LA   PLAD++W  E S    DTPERRA LE R++ ++  IADP V+ +Y  D+R RI+ LF        ++QP   G+
Sbjct:    1 MSFPKGFLDELKARIRVSEVVGRKVKLIRRGREFVGLSPFTNEKSPSFTVNDDKQFWHCFSSGEHGDVIKFLEKTENLSFIEAVERLASEAGLEMPQ---RDPHHVE-RAREEASLIDVMEMAAAFFREKLQAGVGAEARAYLDRRGLKRETIEKFGLGYAPEDRHALIGYLTAKGVKLAQMAEAGLIIAGPDIPEPYDRFRNRVMFPIADARGRTIAFGGRALDSEAKAKYLNSPETPLFHKGRGLYNLDRARK----PAYDAG--TVIAVEGYMDVIGMAQGGIENAVAPLGTALTEDQIGLMWRMAPEPILCFDGDKAGLRAAFRAVERVLPLLKPGHSLRFAMLPGGKDPDDLVREEGGDAMREVLAAARPLADMVWEKEVSAGTWDTPERRAALEARIEEVVGQIADPKVKTHYAQDLRGRIARLFGRDRGQGGARQPYDRGR 438          
BLAST of mRNA_P-wetherbeei_contig10318.1.1 vs. uniprot
Match: A0A523FXQ3_9PROT (DNA primase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523FXQ3_9PROT)

HSP 1 Score: 461 bits (1186), Expect = 2.160e-154
Identity = 235/432 (54.40%), Postives = 306/432 (70.83%), Query Frame = 1
Query:    1 MQFDRNFVDELKARVKLSDVVGRKLRLIRRGREFVALSPFSNEKSPSFTINDDKGFYHCFSSGKHGDAITFLMETESLTFQEAVARLAEDMGMELPKASFQDSHEARTKQAQRVTLYGVMQQAAVFFAAQLTGPAGADARAYLDKRQVPTALRQTMGLGFAPSARTLLCDTLTRAGVTPEQLVEAGLAIKPDNGGAIYDRFRDRIMFPITDNSDRVIAFGGRAMSADAQAKYLNSPETPLFHKGNVLYNLANARRALQAPIKGQGRDTLIVTEGYMDVIALTRAGIPNAVAPLGTALTEAQMAMLWRLTPEPVLCFDGDAAGMRAMLRVVERALPLLEPGRSLRFVLLPDGLDPDDIIARQGGAAMEGYLATPLPLADILWSAETSRLPMDTPERRAGLEQRLQALLETIADPSVRKYYQNDIRQRISNLFR 1296
            + + ++F+D+LK+R +LSDV+GR ++L R GREF  LSPF+NEK+PSF +ND+KGFYHCFSSG+ GD ++F M+T+ L+F E+V  LA++ G+ELP+     + + R +  +R +L  VM+ AA F+  +L    GA AR YL +R +     Q  GLG+AP  RT L D L +  VTP+Q+V+AGLAI+PD+   +YDRFR RI+FPI D   RVIAFGGRA+ ++  AKYLNSPETPLFHKG VLYN   AR +    ++G+ R  LIV EGYMDVI+L  AG   AVAPLGTALT+ Q+  LWR+ PEP+LCFDGD AG+ A  R+V+RALP L+PG SLRF LLP+G DPDDII   G  AM  +L    PLAD+LW  E S  P DTPERRAGLE RL  L+ TI +  V+ +Y+ DIR R++ LFR
Sbjct:    6 LTYSKSFLDDLKSRFRLSDVIGRHVKLTRAGREFKGLSPFTNEKTPSFFVNDEKGFYHCFSSGESGDLLSFFMKTQRLSFNESVKLLADEAGVELPR----QTEDERQRDRERASLLDVMEMAAQFYRQELARREGAPARTYLAERGLKDDTIQAFGLGYAPRGRTALHDHLLQKDVTPDQIVQAGLAIQPDDDRPLYDRFRHRIIFPIADFKGRVIAFGGRALDSNVSAKYLNSPETPLFHKGAVLYNFKAARESCYRSVEGRDR-VLIVAEGYMDVISLVEAGFATAVAPLGTALTDTQLHTLWRVCPEPILCFDGDRAGLSAANRIVDRALPSLKPGHSLRFALLPEGQDPDDIIRAGGAQAMTSFLTDARPLADMLWERELSMAPFDTPERRAGLESRLGDLIRTIRERRVQDHYRADIRARLAALFR 432          
BLAST of mRNA_P-wetherbeei_contig10318.1.1 vs. uniprot
Match: A0A2N3BLV0_9PROT (DNA primase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-5 TaxID=2013668 RepID=A0A2N3BLV0_9PROT)

HSP 1 Score: 461 bits (1185), Expect = 3.250e-154
Identity = 240/431 (55.68%), Postives = 304/431 (70.53%), Query Frame = 1
Query:    1 MQFDRNFVDELKARVKLSDVVGRKLRLIRRGREFVALSPFSNEKSPSFTINDDKGFYHCFSSGKHGDAITFLMETESLTFQEAVARLAEDMGMELPKASFQDSHEARTKQAQRVTLYGVMQQAAVFFAAQLTGPAGADARAYLDKRQVPTALRQTMGLGFAPSARTLLCDTLTRAGVTPEQLVEAGLAIKPDNGGAIYDRFRDRIMFPITDNSDRVIAFGGRAMSADAQAKYLNSPETPLFHKGNVLYNLANARRALQAPIKGQGRDTLIVTEGYMDVIALTRAGIPNAVAPLGTALTEAQMAMLWRLTPEPVLCFDGDAAGMRAMLRVVERALPLLEPGRSLRFVLLPDGLDPDDIIARQGGAAMEGYLATPLPLADILWSAETSRLPMDTPERRAGLEQRLQALLETIADPSVRKYYQNDIRQRISNLF 1293
            M F + F+DELK RV++S++VGRK++L RRGREFV LSPFSNEKSPSFT+NDDK FYHCFSSG+HGD I FL +TE+L+F EAV RLA + GM++P+   +D   A  ++ +  TL  VM+ AA F+  +L    GA+ARAYL++R +        G+G+AP +R  L   LT   +T EQ+ EAGL I   +    YDRFR+R+MFPI D   RVIAFGGRA+SADA+AKYLNSP+TPLFHKG VLYNL  AR+    P    G  T+I  EGYMDVI L + GI NAVAPLGTALTE Q+ +LWR+ PEP+LCFDGD AG+RA  R VER LPLL+PG SLRF LLP+G DPDD++  +GG AM   L+   PLA+++W  E S    DTPERRA LE +++  +  IADP VR +Y   +R R++  F
Sbjct:    1 MSFPKGFLDELKGRVRVSEIVGRKVKLTRRGREFVGLSPFSNEKSPSFTVNDDKQFYHCFSSGEHGDVIKFLEKTENLSFIEAVERLAAEAGMDMPE---RDPFVAE-REKEAATLIDVMEMAAAFYRQKLHEGVGAEARAYLERRSIKGKTLDDFGVGYAPESRHELMGYLTSRKITVEQMAEAGLIISGPDIATPYDRFRNRVMFPIADARGRVIAFGGRALSADAKAKYLNSPDTPLFHKGRVLYNLNRARK----PAYDDG--TVIAVEGYMDVIGLAQGGIYNAVAPLGTALTEDQIGLLWRMAPEPILCFDGDKAGLRAAYRAVERVLPLLKPGHSLRFALLPEGKDPDDLVREEGGDAMRDILSRARPLAEMVWEKEISSGTWDTPERRAKLESQMEEAVGLIADPKVRAHYAESLRTRVAQFF 421          
BLAST of mRNA_P-wetherbeei_contig10318.1.1 vs. uniprot
Match: UPI0001F87373 (DNA primase n=2 Tax=unclassified Methylocystis TaxID=2625913 RepID=UPI0001F87373)

HSP 1 Score: 459 bits (1182), Expect = 8.660e-154
Identity = 238/431 (55.22%), Postives = 304/431 (70.53%), Query Frame = 1
Query:    1 MQFDRNFVDELKARVKLSDVVGRKLRLIRRGREFVALSPFSNEKSPSFTINDDKGFYHCFSSGKHGDAITFLMETESLTFQEAVARLAEDMGMELPKASFQDSHEARTKQAQRVTLYGVMQQAAVFFAAQLTGPAGADARAYLDKRQVPTALRQTMGLGFAPSARTLLCDTLTRAGVTPEQLVEAGLAIKPDNGGAIYDRFRDRIMFPITDNSDRVIAFGGRAMSADAQAKYLNSPETPLFHKGNVLYNLANARRALQAPIKGQGRDTLIVTEGYMDVIALTRAGIPNAVAPLGTALTEAQMAMLWRLTPEPVLCFDGDAAGMRAMLRVVERALPLLEPGRSLRFVLLPDGLDPDDIIARQGGAAMEGYLATPLPLADILWSAETSRLPMDTPERRAGLEQRLQALLETIADPSVRKYYQNDIRQRISNLF 1293
            M+F  +F+DE++ARV +S+VV RK++L R+GRE+  LSPF+ EK+PSF +ND KGF+H FSSGKHGD  TFLMETE L+F EAV RLA   G+ +P     ++ E R +  +R TL   ++ AA FF  QL GPAG +ARAYLD+RQ+    R    LGFAP+ R  L D L   G T E ++EAGL I  ++    YDRFR+R+MFPI D S RVIAFGGRAM ADAQAKYLNSPETPLFHKG  LYNL NAR+A           T++  EGY+DVIALT AG P+ VAPLGTALT  Q  +LWR+  EP+LCFDGD AG++A  R V+ ALPL+ PGR+LRFVLLPDG DPD+++   G +A+   L  PLPL D+LW  ET  + +DTPERRAGLE+RL+ +   I D ++R++YQ ++ +R+  LF
Sbjct:    1 MRFSPSFLDEIRARVPVSEVVRRKVKLTRQGREWRGLSPFNAEKTPSFYVNDQKGFFHDFSSGKHGDGFTFLMETEGLSFPEAVERLAGLAGLPMPV----ETPEQREQDERRATLGDALEWAAGFFEKQLAGPAGREARAYLDRRQISARSRAQFRLGFAPAERHALRDHLAARGATVETMIEAGLLIHGEDIAVPYDRFRNRVMFPICDRSGRVIAFGGRAMEADAQAKYLNSPETPLFHKGATLYNLHNARKAAHES------GTVVAVEGYIDVIALTAAGFPHVVAPLGTALTPEQCGLLWRMAEEPILCFDGDKAGLKAAFRAVDTALPLVGPGRTLRFVLLPDGQDPDELLRAGGPSAVAQALGQPLPLVDLLWMRETEGVALDTPERRAGLERRLREVAGQITDETLRRHYQQELSERLDRLF 421          
BLAST of mRNA_P-wetherbeei_contig10318.1.1 vs. uniprot
Match: A0A3B0RRV4_9ZZZZ (DNA primase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0RRV4_9ZZZZ)

HSP 1 Score: 455 bits (1171), Expect = 9.970e-153
Identity = 240/438 (54.79%), Postives = 305/438 (69.63%), Query Frame = 1
Query:    1 MQFDRNFVDELKARVKLSDVVGRKLRLIRRGREFVALSPFSNEKSPSFTINDDKGFYHCFSSGKHGDAITFLMETESLTFQEAVARLAEDMGMELPKASFQDSHEARTKQAQRVTLYGVMQQAAVFFAAQLTGPAGADARAYLDKRQVPTALRQTMGLGFAPSARTLLCDTLTRAGVTPEQLVEAGLAIKPDNGGAIYDRFRDRIMFPITDNSDRVIAFGGRAMSADAQAKYLNSPETPLFHKGNVLYNLANARRALQAPIKGQGRDTLIVTEGYMDVIALTRAGIPNAVAPLGTALTEAQMAMLWRLTPEPVLCFDGDAAGMRAMLRVVERALPLLEPGRSLRFVLLPDGLDPDDIIARQGGAAMEGYLATPLPLADILWSAETSRLPMDTPERRAGLEQRLQALLETIADPSVRKYYQNDIRQRISNLFRPAHVSS 1314
            M+F   F+DELK+R++ S+V+GR ++L R+GREF  LSPF+ EK+PSF +ND+KGFYHCFSSGKHGD I+F+ ETE L+F EAV RLA + G+ +P+    D  EA+  Q QR TL   + +AA F+AA+LT   G  AR YL  R++  A     GLG+APS RT L D L + G   EQL+EAGL ++P+ GG  +DRFRDRIMFPI D   R+ AFG RA+S DA+AKYLNSPETPLFHKG  LY  A AR+A       Q RD L+V EGYMDVIAL +AG  +AVAPLGTALTE QMA+LWR+ PEPVLCFDGDAAG RA  R ++RALP+LEPG +LRF  LPDG+DPDD+I  +G  AM+  LA    + D+LW  E    P+DTPE++AGL  RL+AL E I    +   Y+ ++  R++  +     SS
Sbjct:    1 MRFGEEFLDELKSRLRPSEVIGRSVKLRRQGREFAGLSPFNKEKTPSFFVNDEKGFYHCFSSGKHGDIISFVQETEGLSFVEAVQRLAAEAGLAMPET---DPEEAKRFQ-QRNTLRDWVAEAAKFYAAELTRVRGRHARQYLAGRELDEADWAAFGLGYAPSQRTGLKDHLVQLGAKKEQLIEAGLLVQPEKGGEPFDRFRDRIMFPIADIRGRITAFGARALSPDAKAKYLNSPETPLFHKGKTLYRFAEARKAAAQ----QKRDGLLVAEGYMDVIALAKAGFGHAVAPLGTALTEDQMALLWRVGPEPVLCFDGDAAGKRAAYRALDRALPVLEPGHTLRFAWLPDGVDPDDLIRAKGAGAMQDVLAKSQSMVDVLWEREWGLEPLDTPEQKAGLTARLRALCEQIGHKELAALYRRELFDRVAKKYANRRQSS 430          
BLAST of mRNA_P-wetherbeei_contig10318.1.1 vs. uniprot
Match: UPI0020115F43 (DNA primase n=1 Tax=Emcibacteraceae bacterium Y4 TaxID=2857064 RepID=UPI0020115F43)

HSP 1 Score: 456 bits (1174), Expect = 1.090e-152
Identity = 235/432 (54.40%), Postives = 305/432 (70.60%), Query Frame = 1
Query:    1 MQFDRNFVDELKARVKLSDVVGRKLRLIRRGREFVALSPFSNEKSPSFTINDDKGFYHCFSSGKHGDAITFLMETESLTFQEAVARLAEDMGMELPKASFQDSHEARTKQAQRVTLYGVMQQAAVFFAAQLTGPAGADARAYLDKRQVPTALRQTMGLGFAPSARTLLCDT-LTRAGVTPEQLVEAGLAIKPDNGGAIYDRFRDRIMFPITDNSDRVIAFGGRAMSADAQAKYLNSPETPLFHKGNVLYNLANARRALQAPIKGQGRDTLIVTEGYMDVIALTRAGIPNAVAPLGTALTEAQMAMLWRLTPEPVLCFDGDAAGMRAMLRVVERALPLLEPGRSLRFVLLPDGLDPDDIIARQGGAAMEGYLATPLPLADILWSAETSRLPMDTPERRAGLEQRLQALLETIADPSVRKYYQNDIRQRISNLF 1293
            M F  +F+DE++ R+ +SDVVGRK+RL R+GR+   L PF NEK+PSFT+NDDKGFYHCF  G HGD I F +ETE L+F E V RLA   G+++P+ S  D+ +A+ K+    TLY +M+    +F  QL    G DAR Y+ KR +     +T  LGF+P+ ++ L D  L R+  T E L+E+G+ IKPD+GG  YDRFR RIMFPITD   RV+AFGGRAMSA+A+AKYLNSPETPLFHKG +LYNL+ AR+A  A  KG+    L+V EGYMDVIAL +AG P  VAPLGTA+TE Q+  +WRL PEP++CFDGD AG RA LRVV+RALPLL+PG SL+FV +PDG DPD  +A QG  A +  L   +PLA +LW+   S +   TPE+RAGLEQ++  +L  I D  ++ YY++D  +R+ NLF
Sbjct:    1 MGFTPDFLDEIRNRLPVSDVVGRKVRLTRKGRDHTGLCPFHNEKTPSFTVNDDKGFYHCFGCGAHGDVINFTLETEGLSFPETVERLAGQAGLQMPENSQYDAKKAKVKK----TLYDLMEAVTHWFETQLMAEIGRDARDYIQKRGLTKQTVKTFRLGFSPNNKSALKDAMLARSEFTEEMLIESGMLIKPDDGGDSYDRFRGRIMFPITDRQGRVVAFGGRAMSANAKAKYLNSPETPLFHKGRLLYNLSGARKA--AFEKGR----LLVAEGYMDVIALAQAGFPEGVAPLGTAVTEDQIREMWRLAPEPMMCFDGDKAGQRAALRVVDRALPLLKPGHSLKFVYMPDGEDPDSFVAGQGARAFDQLLTDAVPLAKVLWNELISDVDFSTPEQRAGLEQKIARVLSEIQDEKIQGYYESDFGKRLKNLF 422          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10318.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2N3EEX0_9PROT1.520e-15756.09DNA primase n=1 Tax=Alphaproteobacteria bacterium ... [more]
A7HVJ7_PARL11.620e-15755.82DNA primase n=1 Tax=Parvibaculum lavamentivorans (... [more]
A0A3B8XWC7_9HYPH2.940e-15757.80DNA primase n=3 Tax=Hyphomicrobiales TaxID=356 Rep... [more]
UPI0019148B8B6.060e-15555.07DNA primase n=1 Tax=Rhodothalassium salexigens Tax... [more]
A0A6N6VCN0_9HYPH8.410e-15554.24DNA primase n=1 Tax=Parvibaculum sedimenti TaxID=2... [more]
A0A523FXQ3_9PROT2.160e-15454.40DNA primase n=1 Tax=Alphaproteobacteria bacterium ... [more]
A0A2N3BLV0_9PROT3.250e-15455.68DNA primase n=1 Tax=Alphaproteobacteria bacterium ... [more]
UPI0001F873738.660e-15455.22DNA primase n=2 Tax=unclassified Methylocystis Tax... [more]
A0A3B0RRV4_9ZZZZ9.970e-15354.79DNA primase n=1 Tax=hydrothermal vent metagenome T... [more]
UPI0020115F431.090e-15254.40DNA primase n=1 Tax=Emcibacteraceae bacterium Y4 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10318contigP-wetherbeei_contig10318:116..1468 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog402881.Plav_2316
Preferred namednaG
PFAMsDnaB_bind,Toprim_4,Toprim_N,zf-CHC2
Model size1353
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02316
KEGG Pathwayko03030,map03030
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.65e-158
EggNOG OGsCOG0358@1|root,COG0358@2|Bacteria,1MUHC@1224|Proteobacteria,2TRU2@28211|Alphaproteobacteria,1JMZM@119043|Rhodobiaceae
DescriptionRNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
Cds size1353
COG categoryL
BRITEko00000,ko00001,ko01000,ko03032
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185863.2982638-CDS-P-wetherbeei_contig10318:115..14681683185863.2982638-CDS-P-wetherbeei_contig10318:115..1468Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10318 116..1468 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10318.1.1prot_P-wetherbeei_contig10318.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10318 116..1468 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10318.1.1

>prot_P-wetherbeei_contig10318.1.1 ID=prot_P-wetherbeei_contig10318.1.1|Name=mRNA_P-wetherbeei_contig10318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=451bp
MQFDRNFVDELKARVKLSDVVGRKLRLIRRGREFVALSPFSNEKSPSFTI
NDDKGFYHCFSSGKHGDAITFLMETESLTFQEAVARLAEDMGMELPKASF
QDSHEARTKQAQRVTLYGVMQQAAVFFAAQLTGPAGADARAYLDKRQVPT
ALRQTMGLGFAPSARTLLCDTLTRAGVTPEQLVEAGLAIKPDNGGAIYDR
FRDRIMFPITDNSDRVIAFGGRAMSADAQAKYLNSPETPLFHKGNVLYNL
ANARRALQAPIKGQGRDTLIVTEGYMDVIALTRAGIPNAVAPLGTALTEA
QMAMLWRLTPEPVLCFDGDAAGMRAMLRVVERALPLLEPGRSLRFVLLPD
GLDPDDIIARQGGAAMEGYLATPLPLADILWSAETSRLPMDTPERRAGLE
QRLQALLETIADPSVRKYYQNDIRQRISNLFRPAHVSSKSQQPAFTGQKR
F
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mRNA from alignment at P-wetherbeei_contig10318:116..1468-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10318.1.1 ID=mRNA_P-wetherbeei_contig10318.1.1|Name=mRNA_P-wetherbeei_contig10318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1353bp|location=Sequence derived from alignment at P-wetherbeei_contig10318:116..1468- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGTTCGACCGGAATTTCGTTGATGAACTGAAAGCGCGGGTAAAGCT TTCCGATGTCGTCGGCCGTAAATTAAGGCTGATCCGGCGTGGCCGGGAAT TTGTGGCGCTTAGTCCGTTCAGCAATGAAAAATCCCCCTCCTTCACCATC AATGACGACAAGGGCTTTTATCACTGCTTTTCCAGCGGCAAGCATGGCGA CGCCATTACCTTTCTGATGGAAACCGAAAGCCTGACTTTTCAGGAGGCGG TGGCCAGGCTGGCCGAGGATATGGGCATGGAGTTGCCCAAAGCCAGCTTT CAGGACAGCCATGAGGCGAGGACGAAGCAGGCCCAGCGCGTTACCCTGTA TGGCGTGATGCAACAGGCGGCGGTGTTTTTTGCGGCTCAACTGACGGGGC CTGCGGGCGCGGATGCCCGCGCCTATCTGGATAAGCGTCAGGTGCCCACG GCCTTGCGGCAGACAATGGGGCTTGGTTTTGCGCCCTCTGCACGCACATT GCTGTGCGACACCCTGACCAGGGCGGGCGTAACGCCAGAACAACTGGTTG AGGCGGGGCTGGCCATAAAACCTGACAATGGCGGCGCAATTTATGACCGG TTCCGTGACCGCATCATGTTCCCGATCACAGATAACAGCGATCGCGTGAT TGCCTTTGGCGGCCGGGCCATGTCAGCGGATGCCCAGGCGAAATATCTGA ATTCGCCGGAAACGCCGCTGTTTCACAAAGGCAATGTGCTGTACAATCTG GCCAATGCGCGGCGCGCCCTGCAGGCCCCGATTAAGGGGCAGGGGCGCGA TACCCTGATCGTCACCGAAGGCTATATGGACGTGATCGCTCTGACCAGGG CGGGCATACCCAATGCGGTCGCCCCCCTCGGCACGGCCCTGACCGAAGCC CAGATGGCCATGCTGTGGCGTTTAACGCCTGAACCTGTGTTGTGCTTTGA CGGCGACGCCGCCGGAATGCGTGCGATGCTGCGGGTGGTGGAACGCGCGC TGCCCCTGCTGGAACCGGGACGTTCGCTGCGGTTTGTGCTATTACCGGAT GGCCTGGATCCCGATGACATCATTGCGCGCCAGGGGGGGGCAGCGATGGA GGGTTATCTCGCGACGCCGCTGCCGCTGGCGGATATCCTGTGGTCAGCCG AGACAAGCCGATTGCCGATGGATACGCCAGAACGGCGCGCTGGACTGGAG CAGCGTCTACAGGCATTACTGGAGACGATTGCCGATCCATCGGTGCGAAA ATACTATCAGAACGATATTCGGCAGCGGATTTCGAATTTATTTCGTCCCG CGCACGTGTCTTCGAAGTCACAGCAGCCGGCTTTTACGGGTCAGAAGCGC TTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10318:116..1468-

>mRNA_P-wetherbeei_contig10318.1.1 ID=mRNA_P-wetherbeei_contig10318.1.1|Name=mRNA_P-wetherbeei_contig10318.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1353bp|location=Sequence derived from alignment at P-wetherbeei_contig10318:116..1468- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGTTCGACCGGAATTTCGTTGATGAACTGAAAGCGCGGGTAAAGCT
TTCCGATGTCGTCGGCCGTAAATTAAGGCTGATCCGGCGTGGCCGGGAAT
TTGTGGCGCTTAGTCCGTTCAGCAATGAAAAATCCCCCTCCTTCACCATC
AATGACGACAAGGGCTTTTATCACTGCTTTTCCAGCGGCAAGCATGGCGA
CGCCATTACCTTTCTGATGGAAACCGAAAGCCTGACTTTTCAGGAGGCGG
TGGCCAGGCTGGCCGAGGATATGGGCATGGAGTTGCCCAAAGCCAGCTTT
CAGGACAGCCATGAGGCGAGGACGAAGCAGGCCCAGCGCGTTACCCTGTA
TGGCGTGATGCAACAGGCGGCGGTGTTTTTTGCGGCTCAACTGACGGGGC
CTGCGGGCGCGGATGCCCGCGCCTATCTGGATAAGCGTCAGGTGCCCACG
GCCTTGCGGCAGACAATGGGGCTTGGTTTTGCGCCCTCTGCACGCACATT
GCTGTGCGACACCCTGACCAGGGCGGGCGTAACGCCAGAACAACTGGTTG
AGGCGGGGCTGGCCATAAAACCTGACAATGGCGGCGCAATTTATGACCGG
TTCCGTGACCGCATCATGTTCCCGATCACAGATAACAGCGATCGCGTGAT
TGCCTTTGGCGGCCGGGCCATGTCAGCGGATGCCCAGGCGAAATATCTGA
ATTCGCCGGAAACGCCGCTGTTTCACAAAGGCAATGTGCTGTACAATCTG
GCCAATGCGCGGCGCGCCCTGCAGGCCCCGATTAAGGGGCAGGGGCGCGA
TACCCTGATCGTCACCGAAGGCTATATGGACGTGATCGCTCTGACCAGGG
CGGGCATACCCAATGCGGTCGCCCCCCTCGGCACGGCCCTGACCGAAGCC
CAGATGGCCATGCTGTGGCGTTTAACGCCTGAACCTGTGTTGTGCTTTGA
CGGCGACGCCGCCGGAATGCGTGCGATGCTGCGGGTGGTGGAACGCGCGC
TGCCCCTGCTGGAACCGGGACGTTCGCTGCGGTTTGTGCTATTACCGGAT
GGCCTGGATCCCGATGACATCATTGCGCGCCAGGGGGGGGCAGCGATGGA
GGGTTATCTCGCGACGCCGCTGCCGCTGGCGGATATCCTGTGGTCAGCCG
AGACAAGCCGATTGCCGATGGATACGCCAGAACGGCGCGCTGGACTGGAG
CAGCGTCTACAGGCATTACTGGAGACGATTGCCGATCCATCGGTGCGAAA
ATACTATCAGAACGATATTCGGCAGCGGATTTCGAATTTATTTCGTCCCG
CGCACGTGTCTTCGAAGTCACAGCAGCCGGCTTTTACGGGTCAGAAGCGC
TTT
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