mRNA_P-wetherbeei_contig10307.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: A0A835Z5G4_9STRA (Farnesyl pyrophosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G4_9STRA) HSP 1 Score: 378 bits (971), Expect = 4.370e-127 Identity = 173/244 (70.90%), Postives = 209/244 (85.66%), Query Frame = 1 Query: 4 MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735 MNRG+GV+DVQ+AFA + GR LS + CRA+VLGWCIE LQ+FFLVADDVMDDS TRRGQPCWYR+PH+K A+ND+ I+ES+V++ L RHF E +Y +++ELFH+VT++TEMGQLLDLTSQP DKPPD RFT RY MIV+YKTAFYTFYLPCAIG+IYA V+D +F LAR ICC IGEYFQIQDD+LDCYGDP +IGKVGTDIQD KCSWLVVQAL+ +P+QR+ L+DNYG++D KK+ Sbjct: 208 MNRGLGVIDVQKAFATKSGRTLSNLEHCRAAVLGWCIEWLQAFFLVADDVMDDSHTRRGQPCWYRVPHVKQIAINDAFILESLVYRVLRRHFSQESYYLQLVELFHDVTYRTEMGQLLDLTSQPLDKPPDFARFTATRYAMIVKYKTAFYTFYLPCAIGMIYASVSDPSSFALARRICCIIGEYFQIQDDYLDCYGDPAVIGKVGTDIQDMKCSWLVVQALEKCTPEQRQQLMDNYGKNDPKKI 451
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: A0A835YUF9_9STRA (Farnesyl pyrophosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUF9_9STRA) HSP 1 Score: 375 bits (962), Expect = 1.880e-126 Identity = 173/244 (70.90%), Postives = 204/244 (83.61%), Query Frame = 1 Query: 4 MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735 MNRG+GV+DVQ+AFA GR LS + CRA+VLGWCIE LQ+FFLVADDVMDDS TRRGQPCW+R+PH+K A+ND+ I+ES+VFK L RHF E +Y ++MELFH+VT++TEMGQLLDLTSQP DKPPD RFT RY MIV+YKTAFYTFYLPCAIG+IYAGV+D +F LAR ICC IGEYFQIQDD+LDCYGDP+ IGKVGTDIQD KCSWLVVQAL+ S Q+ L+ NYG+ D +K+ Sbjct: 155 MNRGLGVIDVQKAFAKSSGRTLSHREHCRAAVLGWCIEWLQAFFLVADDVMDDSHTRRGQPCWFRVPHVKQIAINDAFILESLVFKVLNRHFSQESYYLQLMELFHDVTYRTEMGQLLDLTSQPLDKPPDFTRFTKTRYAMIVKYKTAFYTFYLPCAIGMIYAGVSDPSSFALARRICCTIGEYFQIQDDYLDCYGDPKFIGKVGTDIQDMKCSWLVVQALERCSAAQKDELIANYGKDDAEKI 398
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: D8LGP5_ECTSI (Farnesyl pyrophosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP5_ECTSI) HSP 1 Score: 372 bits (955), Expect = 9.550e-125 Identity = 173/244 (70.90%), Postives = 205/244 (84.02%), Query Frame = 1 Query: 4 MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735 MNRGMGVVDV RAFA GREL E+VCR S+LGWC+E LQ+FFLVADDVMD SLTRRGQPCWY++P ++ A+NDS I+E+ VFK L RHF HE +Y +++ELFH+VT++TEMGQLLDLTSQP D P DL RFT RYRMIVRYKTA+YTFYLPCAIG+IYAGV D +++LARDICC IGE+FQIQDD+LDC+GDPE+IGKVGTDIQDNKCSWLVVQAL+ AS Q+ VL+ NY + K+ Sbjct: 202 MNRGMGVVDVLRAFAEANGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYKVPKVQEIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAPSDLTRFTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKVGTDIQDNKCSWLVVQALERASKAQKAVLIQNYAIDEEAKI 445
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: A0A6H5L554_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L554_9PHAE) HSP 1 Score: 348 bits (893), Expect = 4.120e-115 Identity = 170/257 (66.15%), Postives = 202/257 (78.60%), Query Frame = 1 Query: 4 MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRL---------PHIKLN----AVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735 MNRGMGVVDV RAFA GREL E+VCR S+LGWC+E LQ+FFLVADDVMD SLTRRGQPCWY++ P ++ A+NDS I+E+ VFK L RHF HE +Y +++ELFH+VT++TEMGQLLDLTSQP D P FT RYRMIVRYKTA+YTFYLPCAIG+IYAGV D +++LARDICC IGE+FQIQDD+LDC+GDPE+IGKVGTDIQDNKCSWLVVQAL+ AS Q+ VL+ NY + K+ Sbjct: 212 MNRGMGVVDVLRAFAEADGRELRHEEVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYKVGRQKQRQTHPEFRVTQSEIAINDSFILEAHVFKMLKRHFAHENYYLQLVELFHDVTYRTEMGQLLDLTSQPMDAP-----FTPVRYRMIVRYKTAYYTFYLPCAIGMIYAGVKDPASYRLARDICCRIGEFFQIQDDYLDCFGDPEVIGKVGTDIQDNKCSWLVVQALERASRAQKAVLIQNYAIDEEAKI 463
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: W7TD59_9STRA (Farnesyl pyrophosphate synthase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD59_9STRA) HSP 1 Score: 338 bits (866), Expect = 1.030e-112 Identity = 162/244 (66.39%), Postives = 192/244 (78.69%), Query Frame = 1 Query: 4 MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735 +NRG+ VV V+R A +GR LS + RA+VLGWCIE LQ+FFLVADDVMDDS+TRRGQPCW+RLP +KL AVNDS I+ES VF+ L RHFGHEPFY + +LF EVT QTE+GQLLDLTSQP D DL RFT +RY++IV+YKTAFYTFYLP A GLI +G+ AR +C +GEYFQ+QDD+LDCYGDP+LIGKVGTDIQDNKCSWLVVQAL A+P QR VL +YG+H+ V Sbjct: 96 LNRGLTVVSVKRTIDAAKGRVLSTREFARAAVLGWCIEWLQAFFLVADDVMDDSVTRRGQPCWFRLPQVKLIAVNDSFILESNVFQILKRHFGHEPFYVTLFDLFREVTLQTELGQLLDLTSQPMDGQIDLQRFTPQRYQLIVKYKTAFYTFYLPIACGLILSGMGHPAALTTARRVCVLMGEYFQVQDDYLDCYGDPKLIGKVGTDIQDNKCSWLVVQALAKATPAQRTVLEAHYGKHEDSSV 339
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: A0A7S3XXN8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXN8_HETAK) HSP 1 Score: 333 bits (854), Expect = 7.300e-110 Identity = 155/245 (63.27%), Postives = 197/245 (80.41%), Query Frame = 1 Query: 4 MNRGMGVVDVQRAFAAQ-RGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735 MNRG+ V + R A + +GR+L+ ++ RA VLGWCIE LQ+FFLVADD+MDDSLTRRGQPCWYR P +K+ A+NDS I+ES VF+ L +HFGHE Y +++++FHEV +QTE+GQLLDLTSQP D P DL+RFT+ER+R+IV+YKTA+YTFYL A+G+I +GV + ++ A+ ICC IGEYFQIQDD+LDCYGDP +IGKVGTDIQDNKCSWLVVQAL A P RK+L +NYG+ K+ Sbjct: 184 MNRGLVVPAIMRTLARKNKGRDLTNTELARACVLGWCIEWLQAFFLVADDIMDDSLTRRGQPCWYRKPEVKMIAINDSFILESGVFRLLKKHFGHEETYSQILDVFHEVIYQTELGQLLDLTSQPLDGPTDLDRFTVERHRLIVKYKTAYYTFYLSTAMGMIDSGVTEPALYETAKRICCMIGEYFQIQDDYLDCYGDPAVIGKVGTDIQDNKCSWLVVQALAQAQPADRKLLKENYGKDSAAKI 428
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: A0A7S2JT51_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JT51_9STRA) HSP 1 Score: 320 bits (821), Expect = 2.660e-106 Identity = 157/250 (62.80%), Postives = 191/250 (76.40%), Query Frame = 1 Query: 4 MNRGMGVVDVQRAFA-AQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQP-----HDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735 +NRG+ V+ VQR A GREL+ +V RASVLGW +E LQ+FFLVADDVMDDS TRRGQPCWY+L + A+NDS ++ES F + +HFG EP+Y ++ELF EV QTE GQLLDLTSQP DL+RFTLERY++IV+YKTAFYTFYL AIG+I +GV D + + LA++ICC IGEYFQIQDD+LDCYGDP +IGKVGTDIQDNKCSWLVVQAL+ +Q+K+L +NYGQ D KV Sbjct: 62 LNRGVTVIAVQRTLVQANEGRELTDLEVARASVLGWAVEFLQAFFLVADDVMDDSQTRRGQPCWYKLAEVGNIAINDSFLLESFCFTMIKKHFGMEPYYGRLLELFLEVVQQTEFGQLLDLTSQPATASASSSKIDLSRFTLERYKLIVKYKTAFYTFYLSVAIGMITSGVTDPEAYSLAKEICCIIGEYFQIQDDYLDCYGDPAVIGKVGTDIQDNKCSWLVVQALERVDAEQKKLLEENYGQWDDDKV 311
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: B7GA81_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GA81_PHATC) HSP 1 Score: 319 bits (817), Expect = 5.240e-106 Identity = 157/249 (63.05%), Postives = 191/249 (76.71%), Query Frame = 1 Query: 4 MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQP---HDKPP--DLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735 +NRG V+DV R + L+ + RA+VLGW IE LQ+FFLVADDVMDDS TRRGQPCWY+LP ++L A+NDS ++ES VF L RHFGHEPFY ++EL +VT +TE+GQLLDLTSQP HD+P DL+RFTL RY+ IV+YKTAFY+FYLP A+G+I +GV D AR ICC +GEYFQIQDD+LDC+GDP +IGKVGTDIQDNKCSWLVVQAL +P QR VL ++YGQ D +KV Sbjct: 43 LNRGTTVIDVYRVLLGKA--TLTPTETARAAVLGWAIEFLQAFFLVADDVMDDSQTRRGQPCWYKLPDVQLVAINDSFLLESFVFAILRRHFGHEPFYLHLLELMLDVTHKTELGQLLDLTSQPPQHHDQPHHVDLDRFTLTRYQQIVKYKTAFYSFYLPVAMGMILSGVTDAPALAQARTICCLMGEYFQIQDDYLDCFGDPAVIGKVGTDIQDNKCSWLVVQALARCTPAQRDVLQNHYGQSDDQKV 289
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: A0A7S3GWV7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWV7_9STRA) HSP 1 Score: 323 bits (829), Expect = 1.030e-105 Identity = 153/244 (62.70%), Postives = 189/244 (77.46%), Query Frame = 1 Query: 4 MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPPDLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKV 735 MNRG+ + V+ A G LS ++ C+A+ LGWCIE LQ+FFLVADD+MD+S+TRRGQPCW+RLP +K AVNDS I+ES V+K L ++FG E +Y ++++LF E T QTE GQLLDLTSQ P DLNRFT+ERY IV+YKTAFY+FYLP A G+I AGV D + AR+I +GEYFQIQDD+LDCYG PE+IGK+GTDIQDNKCSWL+VQALD A P QRKVL +NYG+H+ KV Sbjct: 202 MNRGLATLSVRGTLAKLVGHTLSNKERCQAAALGWCIEFLQAFFLVADDLMDESVTRRGQPCWFRLPEVKTIAVNDSFILESFVYKILKKYFGEEAYYYQLVDLFLETTRQTEFGQLLDLTSQKLGAPIDLNRFTIERYTGIVKYKTAFYSFYLPVACGMIIAGVTDVHLYDTAREILVIMGEYFQIQDDYLDCYGTPEMIGKIGTDIQDNKCSWLIVQALDRADPKQRKVLEENYGRHEAAKV 445
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Match: A0A7S3V6T5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6T5_9STRA) HSP 1 Score: 320 bits (819), Expect = 4.440e-105 Identity = 159/248 (64.11%), Postives = 191/248 (77.02%), Query Frame = 1 Query: 4 MNRGMGVVDVQRAFA-AQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVMDDSLTRRGQPCWYRLPHIKLNAVNDSLIIESVVFKTLMRHFGHEPFYREMMELFHEVTFQTEMGQLLDLTSQPHDKPP-DLNRFTLERYRMIVRYKTAFYTFYLPCAIGLIYAGVADKKNFKLARDICCAIGEYFQIQDDFLDCYGDPELIGKVGTDIQDNKCSWLVVQALDCASPDQRKVLVDNYGQHDLKKVTN 741 +NRG+ VV V R A GR+L+ +V RASVLGW IE LQ+FFLVADDVMD S TRRGQPCWY+LP++K A+NDS ++ES VF L +HFG E +Y +++ELF +V QTE GQLLDLTSQ DL RFTLERY+ IV+YKTAFYTFYLP AIG+I + V + + LA+ ICC +GEYFQIQDD+LDC+GDPE+IGKVGTDIQDNKCSWLVVQALD +P+QR VL NYGQ D +KV N Sbjct: 133 LNRGVTVVAVHRTLVKANEGRDLTDIEVARASVLGWAIEFLQAFFLVADDVMDASKTRRGQPCWYKLPNVKNIAINDSFLLESYVFTMLKQHFGKEEYYLQLLELFLQVIQQTEFGQLLDLTSQDEGSEEIDLTRFTLERYQKIVKYKTAFYTFYLPVAIGMITSRVEEGPTYDLAKKICCQMGEYFQIQDDYLDCFGDPEVIGKVGTDIQDNKCSWLVVQALDRVTPEQRAVLEANYGQWDDQKVAN 380 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10307.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10307.1.1 >prot_P-wetherbeei_contig10307.1.1 ID=prot_P-wetherbeei_contig10307.1.1|Name=mRNA_P-wetherbeei_contig10307.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp MNRGMGVVDVQRAFAAQRGRELSVEDVCRASVLGWCIEMLQSFFLVADDVback to top mRNA from alignment at P-wetherbeei_contig10307:114..2002+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10307.1.1 ID=mRNA_P-wetherbeei_contig10307.1.1|Name=mRNA_P-wetherbeei_contig10307.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1889bp|location=Sequence derived from alignment at P-wetherbeei_contig10307:114..2002+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10307:114..2002+ >mRNA_P-wetherbeei_contig10307.1.1 ID=mRNA_P-wetherbeei_contig10307.1.1|Name=mRNA_P-wetherbeei_contig10307.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig10307:114..2002+ (Phaeothamnion wetherbeei SAG_119_79)back to top |