mRNA_P-wetherbeei_contig1030.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1030.1.1
Unique NamemRNA_P-wetherbeei_contig1030.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1030.1.1 vs. uniprot
Match: W7U5L3_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L3_9STRA)

HSP 1 Score: 194 bits (493), Expect = 8.670e-47
Identity = 136/339 (40.12%), Postives = 184/339 (54.28%), Query Frame = 2
Query: 1655 LDLQVVGLSATLPNMEEVADWMGAILYTSEFRPVPLTERVLRNGTELLDRKEKLVRTLLIDGVGYGSGGGEPAAQGKRARRPDPGLLAAQGLAVLCRESVAAANQVIIFCSTRQHCLNCALAVAKALALCP----------------PPDDMVEQRAALLTRLAAAVPAGAGADPGLRQTVPAGVAFHHAGLAEQERTEIEAAYRGGLLSVLAATSTLGAGVNLPAARVIFRSLDGGGGRL-TVARYRQMAGRAGRAGGSAHGEAILMVVTAAEYRAALALMNASLPRMVSGMSPLPPARGGDGGAALLRAVLEGVAGGMLTRRLEVRDFIANTLLWRQ 2620
            LD+Q++GLSATLPN+EEVADWM A L+ + FRPV L E + + G  L       +R L                Q +R    DP       +  L  E+    +QV++FC  R+HC NCA  +A+ L + P                  DD V+ R ALL  L           P L   +P G+AFHHAGL + E+  +E A+R G+LSV+ ATSTLG G+NLPAARVIFR+L  GG R+  ++ YRQMAGRAGRAG   +GE+IL+  +  + + A  LM   L  + S + P       DGG AL+RA+LE +A G L +  ++  F+  TL  RQ
Sbjct:  312 LDVQIIGLSATLPNLEEVADWMDAALFHTSFRPVELQE-MYKWGDALFAADGVCLRRL----------------QSRRPPAEDP-----DHITTLVEETTRRGHQVLVFCHYRKHCENCATLLAEQLGVLPGAIMANAMTRQKKEDKESDDTVKMRKALLDDLREH---SMSVHPCLLLAIPKGIAFHHAGLTDHEKNALEEAFRRGVLSVIVATSTLGTGINLPAARVIFRTLRPGGNRVFDISSYRQMAGRAGRAGQQKYGESILLARSPQDVKEATRLMTEPLHDLHSCLDPEQ-----DGGRALVRAILEAIASGSLQKNDDLDIFLHCTLALRQ 620          
BLAST of mRNA_P-wetherbeei_contig1030.1.1 vs. uniprot
Match: D7FM15_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM15_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 1.840e-46
Identity = 144/376 (38.30%), Postives = 186/376 (49.47%), Query Frame = 2
Query: 1664 QVVGLSATLPNMEEVADWMGAILYTSEFRPVPLTERVLRNGTELLDRKEKLVRTLLIDGVGYGSGGGEPAAQGKRARRPDPGLLAAQGLAVLCRESVAAANQVIIFCSTRQHCLNCALAVAKALALCPPPDDMVEQRAALLTRLAAAVPAGAGADPGLRQTVPAGVAFHHAGLAEQERTEIEAAYRGGLLSVLAATSTLGAGVNLPAARVIFRSLDGGGGRLTVARYRQMAGRAGRAG-GSAHGEAILMVVTAAEYRAALALMNASLPRMVSGMSPLPPARGGDGGAALLRAVLEGVAGGMLTRRLEVRDFIANTLLWRQFRGTPAETAAFCTTAXXXXXXXXXXXXGDAVKSQELLVRYAEAALDYLLQRGCVSL 2788
            Q+VG+SATL N  E+A W+GA L+ S+FRP+PL ERV+  G  + D++  +VR              E AA       PD        +  LCRES  A +QVIIFCST+Q C NCAL                                        ++T+P GVAFHHAGLA+ ER+ IE A+R G L VLAATSTLGAGVNLPA RVI R+++  GG L+   YRQMAGRAGR G G A GEA+L+     +   A  LMNA L  + S ++P       DGG    R  LE V G ++  R ++R             G PA ++   T                   +++ L  YA AA+  L+  GCV L
Sbjct:  272 QIVGMSATLSNGAELAKWLGATLHVSDFRPIPLDERVVL-GMHVYDKEGFVVR--------------EFAAPAHPQSDPDH-------VVTLCRESCRAGDQVIIFCSTKQFCHNCAL----------------------------------------KETIPHGVAFHHAGLADTERSAIEKAFRSGTLDVLAATSTLGAGVNLPAGRVILRNINAVGGGLSATSYRQMAGRAGRKGAGRARGEALLIAANKGQAARATGLMNAGLAAVRSALTPTA-----DGGTGFTRMFLEAVCGKLIRTRADLRT------------GCPAVSSPNITCTLIFHQQPDEA-------ARDRLHDYAWAAIQLLIDEGCVEL 561          
BLAST of mRNA_P-wetherbeei_contig1030.1.1 vs. uniprot
Match: A0A087GJ31_ARAAL (Uncharacterized protein n=2 Tax=Arabis alpina TaxID=50452 RepID=A0A087GJ31_ARAAL)

HSP 1 Score: 179 bits (453), Expect = 6.070e-42
Identity = 125/318 (39.31%), Postives = 178/318 (55.97%), Query Frame = 2
Query: 1661 LQVVGLSATLPNMEEVADWMGAILYTSEFRPVPLTERVLRNGTELLDRKEKLVRTLLIDGVGYGSGGGEPAAQGKRARRPDPGLLAAQGLAVLCRESVAAANQVIIFCSTRQHCLNCALAVAKALALCP-PPDDMVEQRAALLTRLAAAVPAGAGADPGLRQTVPAGVAFHHAGLAEQERTEIEAAYRGGLLSVLAATSTLGAGVNLPAARVIFRSLDGGGGRLTVARYRQMAGRAGRAGGSAHGEAILMVVTAAEYRAALALMNASLPRMVSGMSPLPPARGGDGGAALLRAVLEGVAGGMLTRRLEVRDFIANTLL 2611
            LQ+VG+SAT+PN+  VADW+ A LY +EFRPVPL E  ++ G  + ++K ++VRT+             P A     + PD        +  LC E V   N V+IFCS+R+ C + A  +AK +   P   D    +   + + + A   + +G DP L +T+P+GVA+HHAGL  +ER  +E  YR GL+ VL ATSTL AGVNLPA RVIFR    G   L   RY+QMAGRAGR G    GE++L +    E +  +AL+N S P + S +S        +    +  A+LE VAGG++    ++  ++  TLL
Sbjct:  662 LQIVGMSATMPNVGAVADWLQAALYQTEFRPVPL-EEYIKVGNTIFNKKMEVVRTI-------------PKAADMGGKDPDH-------IIELCNEIVQEGNSVLIFCSSRKGCESTARHIAKLIKKVPIDVDGENSEFMDIKSAIDALRRSPSGVDPVLEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPMIGRDFLDGTRYKQMAGRAGRTGIDTKGESVL-ICKPGELKRIMALLNESCPPLQSCLS--------EDKNGMTHAILEVVAGGIVQTAKDIHRYVRCTLL 949          
BLAST of mRNA_P-wetherbeei_contig1030.1.1 vs. uniprot
Match: A0A6N2BM49_SOLCI (Uncharacterized protein n=1 Tax=Solanum chilense TaxID=4083 RepID=A0A6N2BM49_SOLCI)

HSP 1 Score: 177 bits (450), Expect = 1.400e-41
Identity = 132/331 (39.88%), Postives = 180/331 (54.38%), Query Frame = 2
Query: 1634 SDASTGMLD----LQVVGLSATLPNMEEVADWMGAILYTSEFRPVPLTERVLRNGTELLDRKEKLVRTLLIDGVGYGSGGGEPAAQGKRARRPDPGLLAAQGLAVLCRESVAAANQVIIFCSTRQHCLNCALAVAKALALCPPPDDMVEQRAALLTRLAAAVPAG-AGADPGLRQTVPAGVAFHHAGLAEQERTEIEAAYRGGLLSVLAATSTLGAGVNLPAARVIFRSLDGGGGRLTVARYRQMAGRAGRAGGSAHGEAILMVVTAAEYRAALALMNASLPRMVSGMSPLPPARGGDGGAALLRAVLEGVAGGMLTRRLEVRDFIANTLL 2611
            S  S+G +D    LQ+VG+SATLPN+  VADW+ A LY +EFRPVPL E V + G  + ++K  +VRT+                    ++  D G      +  LC E V   N V+IFCS+R+ C + A  VAK L          +  +  +T    A+    AG DP L +T+PAGVA+HHAGL  +ER  +E  YR GL+ VL ATSTL AGVNLPA RVIFR    G   +   RYRQMAGRAGR G    GE++L +    E +   AL+N S P + S +S        +    ++ A+LE VAGG++    ++  ++  TLL
Sbjct:  666 SGTSSGKVDPAGSLQIVGMSATLPNVTAVADWLQAALYQTEFRPVPLEEYV-KVGNTIYNQKMDIVRTI--------------------SKAADLGGKDPDHIVELCNEVVQEGNSVLIFCSSRKGCESTARHVAKHLKKFSLNQLSGQNESIDITSAIDALRRSPAGLDPILEETLPAGVAYHHAGLTVEERETVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESVL-ICKPEEVKRITALVNESCPPLHSCLS--------EDKNGMIHAILEVVAGGIVQTASDINRYVRCTLL 966          
BLAST of mRNA_P-wetherbeei_contig1030.1.1 vs. uniprot
Match: UPI000734DCAD (helicase and polymerase-containing protein TEBICHI n=1 Tax=Solanum pennellii TaxID=28526 RepID=UPI000734DCAD)

HSP 1 Score: 177 bits (450), Expect = 1.400e-41
Identity = 132/331 (39.88%), Postives = 180/331 (54.38%), Query Frame = 2
Query: 1634 SDASTGMLD----LQVVGLSATLPNMEEVADWMGAILYTSEFRPVPLTERVLRNGTELLDRKEKLVRTLLIDGVGYGSGGGEPAAQGKRARRPDPGLLAAQGLAVLCRESVAAANQVIIFCSTRQHCLNCALAVAKALALCPPPDDMVEQRAALLTRLAAAVPAG-AGADPGLRQTVPAGVAFHHAGLAEQERTEIEAAYRGGLLSVLAATSTLGAGVNLPAARVIFRSLDGGGGRLTVARYRQMAGRAGRAGGSAHGEAILMVVTAAEYRAALALMNASLPRMVSGMSPLPPARGGDGGAALLRAVLEGVAGGMLTRRLEVRDFIANTLL 2611
            S  S+G +D    LQ+VG+SATLPN+  VADW+ A LY +EFRPVPL E V + G  + ++K  +VRT+                    ++  D G      +  LC E V   N V+IFCS+R+ C + A  VAK L          +  +  +T    A+    AG DP L +T+PAGVA+HHAGL  +ER  +E  YR GL+ VL ATSTL AGVNLPA RVIFR    G   +   RYRQMAGRAGR G    GE++L +    E +   AL+N S P + S +S        +    ++ A+LE VAGG++    ++  ++  TLL
Sbjct:  666 SGTSSGKVDPAGSLQIVGMSATLPNVTAVADWLQAALYQTEFRPVPLEEYV-KVGNTIYNQKMDIVRTI--------------------SKAADLGGKDPDHIVELCNEVVQEGNSVLIFCSSRKGCESTARHVAKHLKKFSLNQLSGQNESIDITSAIDALRRSPAGLDPILEETLPAGVAYHHAGLTVEERETVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESVL-ICKPEEVKRITALVNESCPPLHSCLS--------EDKNGMIHAILEVVAGGIVQTASDINRYVRCTLL 966          
BLAST of mRNA_P-wetherbeei_contig1030.1.1 vs. uniprot
Match: A0A3Q7IL01_SOLLC (Uncharacterized protein n=3 Tax=Solanum lycopersicum TaxID=4081 RepID=A0A3Q7IL01_SOLLC)

HSP 1 Score: 177 bits (450), Expect = 1.410e-41
Identity = 132/331 (39.88%), Postives = 180/331 (54.38%), Query Frame = 2
Query: 1634 SDASTGMLD----LQVVGLSATLPNMEEVADWMGAILYTSEFRPVPLTERVLRNGTELLDRKEKLVRTLLIDGVGYGSGGGEPAAQGKRARRPDPGLLAAQGLAVLCRESVAAANQVIIFCSTRQHCLNCALAVAKALALCPPPDDMVEQRAALLTRLAAAVPAG-AGADPGLRQTVPAGVAFHHAGLAEQERTEIEAAYRGGLLSVLAATSTLGAGVNLPAARVIFRSLDGGGGRLTVARYRQMAGRAGRAGGSAHGEAILMVVTAAEYRAALALMNASLPRMVSGMSPLPPARGGDGGAALLRAVLEGVAGGMLTRRLEVRDFIANTLL 2611
            S  S+G +D    LQ+VG+SATLPN+  VADW+ A LY +EFRPVPL E V + G  + ++K  +VRT+                    ++  D G      +  LC E V   N V+IFCS+R+ C + A  VAK L          +  +  +T    A+    AG DP L +T+PAGVA+HHAGL  +ER  +E  YR GL+ VL ATSTL AGVNLPA RVIFR    G   +   RYRQMAGRAGR G    GE++L +    E +   AL+N S P + S +S        +    ++ A+LE VAGG++    ++  ++  TLL
Sbjct:  666 SGTSSGKVDPAGSLQIVGMSATLPNVTAVADWLQAALYQTEFRPVPLEEYV-KVGNTIYNQKMDIVRTI--------------------SKAADLGGKDPDHIVELCNEVVQEGNSVLIFCSSRKGCESTARHVAKHLKKFSLNQLSGQNESIDITSAIDALRRSPAGLDPILEETLPAGVAYHHAGLTVEERETVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESVL-ICKPEEVKRITALVNESCPPLHSCLS--------EDKNGMIHAILEVVAGGIVQTASDINRYVRCTLL 966          
BLAST of mRNA_P-wetherbeei_contig1030.1.1 vs. uniprot
Match: A0A0D3BLS9_BRAOL (Uncharacterized protein n=8 Tax=Brassica TaxID=3705 RepID=A0A0D3BLS9_BRAOL)

HSP 1 Score: 177 bits (449), Expect = 1.840e-41
Identity = 124/318 (38.99%), Postives = 178/318 (55.97%), Query Frame = 2
Query: 1661 LQVVGLSATLPNMEEVADWMGAILYTSEFRPVPLTERVLRNGTELLDRKEKLVRTLLIDGVGYGSGGGEPAAQGKRARRPDPGLLAAQGLAVLCRESVAAANQVIIFCSTRQHCLNCALAVAKALALCP-PPDDMVEQRAALLTRLAAAVPAGAGADPGLRQTVPAGVAFHHAGLAEQERTEIEAAYRGGLLSVLAATSTLGAGVNLPAARVIFRSLDGGGGRLTVARYRQMAGRAGRAGGSAHGEAILMVVTAAEYRAALALMNASLPRMVSGMSPLPPARGGDGGAALLRAVLEGVAGGMLTRRLEVRDFIANTLL 2611
            LQ+VG+SAT+PN+  VADW+ A LY +EFRPVPL E  ++ G  + ++K ++VRT+             P A     + PD        +  LC E V   N V+IFCS+R+ C + A  ++K +   P   D    +   + + + A   + +G DP L +T+P+GVA+HHAGL  +ER  +E  YR GL+ VL ATSTL AGVNLPA RVIFR    G   L   RY+QMAGRAGR G    GE++L +    E +  +AL+N S P + S +S        +    +  A+LE VAGG++    ++  ++  TLL
Sbjct:  662 LQIVGMSATMPNVGAVADWLQAALYQTEFRPVPL-EEYIKVGNTIYNKKMEVVRTI-------------PKAADMGGKDPDH-------IIELCNEVVQEGNSVLIFCSSRKGCESTARHISKLIKKVPIDVDGEHSEFMDIQSAIDALRRSPSGVDPVLEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPMIGRDFLDGTRYKQMAGRAGRTGIDTKGESVL-ICKPGELKRIMALLNESCPPLESCLS--------EDKNGMTHAILEVVAGGIVQTAKDIHRYVRCTLL 949          
BLAST of mRNA_P-wetherbeei_contig1030.1.1 vs. uniprot
Match: M4FIK9_BRARP (Uncharacterized protein n=2 Tax=Brassica campestris TaxID=3711 RepID=M4FIK9_BRARP)

HSP 1 Score: 177 bits (449), Expect = 1.850e-41
Identity = 124/318 (38.99%), Postives = 178/318 (55.97%), Query Frame = 2
Query: 1661 LQVVGLSATLPNMEEVADWMGAILYTSEFRPVPLTERVLRNGTELLDRKEKLVRTLLIDGVGYGSGGGEPAAQGKRARRPDPGLLAAQGLAVLCRESVAAANQVIIFCSTRQHCLNCALAVAKALALCP-PPDDMVEQRAALLTRLAAAVPAGAGADPGLRQTVPAGVAFHHAGLAEQERTEIEAAYRGGLLSVLAATSTLGAGVNLPAARVIFRSLDGGGGRLTVARYRQMAGRAGRAGGSAHGEAILMVVTAAEYRAALALMNASLPRMVSGMSPLPPARGGDGGAALLRAVLEGVAGGMLTRRLEVRDFIANTLL 2611
            LQ+VG+SAT+PN+  VADW+ A LY +EFRPVPL E  ++ G  + ++K ++VRT+             P A     + PD        +  LC E V   N V+IFCS+R+ C + A  ++K +   P   D    +   + + + A   + +G DP L +T+P+GVA+HHAGL  +ER  +E  YR GL+ VL ATSTL AGVNLPA RVIFR    G   L   RY+QMAGRAGR G    GE++L +    E +  +AL+N S P + S +S        +    +  A+LE VAGG++    ++  ++  TLL
Sbjct:  672 LQIVGMSATMPNVGAVADWLQAALYQTEFRPVPL-EEYIKVGNTIYNKKMEVVRTI-------------PKAADMGGKDPDH-------IIELCNEVVQEGNSVLIFCSSRKGCESTARHISKLIKRVPIDVDGEHSEFMDIQSAIDALRRSPSGVDPVLEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPMIGRDFLDGTRYKQMAGRAGRTGIDTKGESVL-ICKPGELKRIMALLNESCPPLESCLS--------EDKNGMTHAILEVVAGGIVQTAKDIHRYVRCTLL 959          
BLAST of mRNA_P-wetherbeei_contig1030.1.1 vs. uniprot
Match: UPI0003D28ED9 (helicase and polymerase-containing protein TEBICHI isoform X1 n=4 Tax=Solanum tuberosum TaxID=4113 RepID=UPI0003D28ED9)

HSP 1 Score: 177 bits (449), Expect = 1.860e-41
Identity = 131/335 (39.10%), Postives = 184/335 (54.93%), Query Frame = 2
Query: 1634 SDASTGMLD----LQVVGLSATLPNMEEVADWMGAILYTSEFRPVPLTERVLRNGTELLDRKEKLVRTLLIDGVGYGSGGGEPAAQGKRARRPDPGLLAAQGLAVLCRESVAAANQVIIFCSTRQHCLNCALAVAK-----ALALCPPPDDMVEQRAALLTRLAAAVPAGAGADPGLRQTVPAGVAFHHAGLAEQERTEIEAAYRGGLLSVLAATSTLGAGVNLPAARVIFRSLDGGGGRLTVARYRQMAGRAGRAGGSAHGEAILMVVTAAEYRAALALMNASLPRMVSGMSPLPPARGGDGGAALLRAVLEGVAGGMLTRRLEVRDFIANTLL 2611
            S  S+G +D    LQ+VG+SATLPN+  VADW+ A LY +EFRPVPL E V + G  + ++K  +VRT+                    ++  D G      +  LC E V   N V+IFCS+R+ C + A  VAK     +L      ++ ++    + + + A   + AG DP L +T+PAGVA+HHAGL  +ER  +E  YR GL+ VL ATSTL AGVNLPA RVIFR    G   +   RYRQMAGRAGR G    GE++L +    E +   AL+N S P + S +S        +    ++ A+LE VAGG++    ++  ++  TLL
Sbjct:  666 SGTSSGKVDPAGSLQIVGMSATLPNVTAVADWLQAALYQTEFRPVPLEEYV-KVGNTIYNQKMDIVRTI--------------------SKAADLGGKDPDHIVELCNEVVQEGNSVLIFCSSRKGCESTARHVAKHVKRFSLNQLSGQNESID----ITSAIDALRRSPAGLDPILEETLPAGVAYHHAGLTVEERETVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPRIGRDFIDGTRYRQMAGRAGRTGIDTKGESVL-ICKPEEVKRITALVNESCPPLHSCLS--------EDKNGMIHAILEVVAGGIVQTASDINRYVRCTLL 966          
BLAST of mRNA_P-wetherbeei_contig1030.1.1 vs. uniprot
Match: UPI000E6FF8F6 (helicase and polymerase-containing protein TEBICHI-like n=2 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FF8F6)

HSP 1 Score: 177 bits (449), Expect = 1.880e-41
Identity = 132/336 (39.29%), Postives = 187/336 (55.65%), Query Frame = 2
Query: 1634 SDASTGMLD----LQVVGLSATLPNMEEVADWMGAILYTSEFRPVPLTERVLRNGTELLDRKEKLVRTLLIDGVGYGSGGGEPAAQGKRARRPDPGLLAAQGLAVLCRESVAAANQVIIFCSTRQHCLNCALAVAKALALCPPP--DDMVEQRAALLTRLAAAVPA----GAGADPGLRQTVPAGVAFHHAGLAEQERTEIEAAYRGGLLSVLAATSTLGAGVNLPAARVIFRSLDGGGGRLTVARYRQMAGRAGRAGGSAHGEAILMVVTAAEYRAALALMNASLPRMVSGMSPLPPARGGDGGAALLRAVLEGVAGGMLTRRLEVRDFIANTLL 2611
            S +S+G  D    LQ+VG+SAT+PN+  VADW+ A LY +EFRPVPL E  ++ G+ + ++K +L+RT+             P       + PD        +  LC E V   + V+IFCS+R+ C + A  VAK L   P    DD  E     L+ +++A+ A      G DP L +T+P+GVA+HHAGL  +ER  +E  YR GL+ VL ATSTL AGVNLPA RVIFR    G   L   RY+QM+GRAGR G    GE++L +  + E +   A++N S P + S +S        D    +  A+LE VAGG++    ++  ++  TLL
Sbjct:  687 SGSSSGKGDPAHGLQMVGMSATMPNVAAVADWLQAALYQTEFRPVPL-EEYIKVGSSIYNKKMELIRTI-------------PKTADLGGKDPDH-------VVELCNEVVQEGHSVLIFCSSRKGCESTAKHVAKFLKKFPISNNDDQSE-----LSDISSAIDALKRSPVGLDPVLEETLPSGVAYHHAGLTVEEREVVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQPKIGRDFLDGTRYKQMSGRAGRTGIDTKGESVL-ICKSEEIKRITAILNDSCPPLQSCLS--------DDKNGMTHAILEVVAGGIVQTANDIHRYVRCTLL 987          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1030.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7U5L3_9STRA8.670e-4740.12Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
D7FM15_ECTSI1.840e-4638.30DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A087GJ31_ARAAL6.070e-4239.31Uncharacterized protein n=2 Tax=Arabis alpina TaxI... [more]
A0A6N2BM49_SOLCI1.400e-4139.88Uncharacterized protein n=1 Tax=Solanum chilense T... [more]
UPI000734DCAD1.400e-4139.88helicase and polymerase-containing protein TEBICHI... [more]
A0A3Q7IL01_SOLLC1.410e-4139.88Uncharacterized protein n=3 Tax=Solanum lycopersic... [more]
A0A0D3BLS9_BRAOL1.840e-4138.99Uncharacterized protein n=8 Tax=Brassica TaxID=370... [more]
M4FIK9_BRARP1.850e-4138.99Uncharacterized protein n=2 Tax=Brassica campestri... [more]
UPI0003D28ED91.860e-4139.10helicase and polymerase-containing protein TEBICHI... [more]
UPI000E6FF8F61.880e-4139.29helicase and polymerase-containing protein TEBICHI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1030contigP-wetherbeei_contig1030:2..3302 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FM15
PFAMsDEAD,DNA_pol_A,Helicase_C
Model size2914
Max annot lvl2759|Eukaryota
KEGG koko:K02349
Hectar predicted targeting categoryother localisation
GOsGO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006287,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360
Exons3
Evalue2.26e-48
EggNOG OGsCOG0749@1|root,KOG0950@2759|Eukaryota
Ec32 ortholog descriptionDEAD box helicase
Ec32 orthologEc-01_010260.1
EC2.7.7.7
Descriptionplastid DNA replication
Cds size2157
COG categoryL
BRITEko00000,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185862.56183-CDS-P-wetherbeei_contig1030:1..3441683185862.56183-CDS-P-wetherbeei_contig1030:1..344Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1030 2..344 -
1683185862.5727398-CDS-P-wetherbeei_contig1030:473..22871683185862.5727398-CDS-P-wetherbeei_contig1030:473..2287Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1030 474..2287 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185862.5817611-UTR-P-wetherbeei_contig1030:2287..23001683185862.5817611-UTR-P-wetherbeei_contig1030:2287..2300Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1030 2288..2300 -
1683185862.5914435-UTR-P-wetherbeei_contig1030:2558..33021683185862.5914435-UTR-P-wetherbeei_contig1030:2558..3302Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1030 2559..3302 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1030.1.1prot_P-wetherbeei_contig1030.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1030 2..2287 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1030.1.1

>prot_P-wetherbeei_contig1030.1.1 ID=prot_P-wetherbeei_contig1030.1.1|Name=mRNA_P-wetherbeei_contig1030.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=719bp
MEKANAILNRLVAAGRAAELCIVVIDELHMIADAGRGPLLELLLTKLLHL
SRRRRRPAGSSPTSLLALTPLGAASPCGAVAGAVATAATAAGAANVAIAA
APAAAAAAMARASAAGSAGNPELSASAAARSGGKAGTVGPPAGIGGGDSE
VVAASVAAAGAGGVPRIANPYACQGQPLRSILANPMVLQLPPSELLLPPL
RHTTLNLPEALRPQAPSPPTSTDSNGPSSEAPSQSSPIPPPLPLRPENPY
NRPVWTAVAAARPRPARGISLPPQPTRAEAAAAALAAAAAAGSDASTGML
DLQVVGLSATLPNMEEVADWMGAILYTSEFRPVPLTERVLRNGTELLDRK
EKLVRTLLIDGVGYGSGGGEPAAQGKRARRPDPGLLAAQGLAVLCRESVA
AANQVIIFCSTRQHCLNCALAVAKALALCPPPDDMVEQRAALLTRLAAAV
PAGAGADPGLRQTVPAGVAFHHAGLAEQERTEIEAAYRGGLLSVLAATST
LGAGVNLPAARVIFRSLDGGGGRLTVARYRQMAGRAGRAGGSAHGEAILM
VVTAAEYRAALALMNASLPRMVSGMSPLPPARGGDGGAALLRAVLEGVAG
GMLTRRLEVRDFIANTLLWRQFRGTPAETAAFCTTAATAAAVGGGDDGGD
AVKSQELLVRYAEAALDYLLQRGCVSLYHARPADYEPDAVAPATPPVGSG
PVGAAAPTDGPAANTATKE
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mRNA from alignment at P-wetherbeei_contig1030:2..3302-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1030.1.1 ID=mRNA_P-wetherbeei_contig1030.1.1|Name=mRNA_P-wetherbeei_contig1030.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3301bp|location=Sequence derived from alignment at P-wetherbeei_contig1030:2..3302- (Phaeothamnion wetherbeei SAG_119_79)
CATGTTCCAAGGTCTTAAACAGCGTAGTAAGAGGGCAGTTCCTGACTTTT CCCTCTGCGTTGTGGGCAGTGAAGAGGCCCAGGCTTTGCTGGCGGGTCTC GTTTCTTTCCCTCAGCAACAATTTTTGTGCAGTGAGGAAAGAGGGGCTCG CTTCCAAAACTGGCTTACCTCTTTCCATGGCACTGCAGCTGCGATGATCA CTTCGTGGCGCGCATAGCTTTGCACTAGTCTAAATCTCACATTTCGCAAG AAGCCCCCTTTCTCATGTCCGGTGCAGCGAGCCCTCCTCCGGTTGGGCTC CCCGAGGTCTTCCGAAGGCTGGGCCTCCCCTCGCCGCTCATGGCTCATTA CGAAAAGCTGGGCATCAGCAAGCTGTACGGCTGGCAGGCCGAGTGCGTCC TGCAACCCGAGGTTCTTGGCATCACGCGAGAGGGCAGCCAGCCACCAAGC AACCTGTTCTACTCTGCCCCGACATCGGGAGGGAAGACGATGGTCGCCGA GCTTCTTATGCTGCGGCGCCTCTTGGGAGACGGCAGTGGCACTGCCGTGG AGCATCCTAAGGGCGCGCGGCGAACCTGCGCCTTGATGGTTCTGCCTTTT GTCAGTGTCGTCGCCGAGAAGACGGCGCACCTGCAGGCCGTCGTCAAGGC GTACAACAGCGGCCGGCCGAAGCGGGAGCAGCTGCGTGTGCGCGGGTTCC ACGGCACGGGAAAGTCCAAGGGCCTCGGATCGACAGCCATTGCGGTGAGT CATTTTTCAACGCTATTCCCTTGCATTGGAATTCCGCTTGTCTGTCATAA ATGCGCTGGCTCGCTTTTGGAGGGCATTTTTCCGGCACCAGGGTTTCCAC CCTTGCCAGTTCCTGCCATCATACCTCTTGCTTTAGTGTTGCAATCTACA GCGATAGTCGACCCCTTTTTAATAAGGTTAATTTTTTATCCAAATGCGAA ATCTATCACTGCCGCCGGACACTTCTCCTCTCCTACCGACATCGGTTGGC AGCTAGGTTTGCACGATGGAGAAGGCCAACGCGATCCTCAACCGCCTCGT CGCCGCCGGCCGCGCGGCGGAGCTCTGCATCGTCGTCATCGACGAGCTGC ACATGATCGCCGACGCCGGCCGCGGCCCGCTGCTAGAACTGCTGCTCACC AAGCTGCTGCATCTCAGCCGCCGCCGCCGACGCCCCGCGGGGTCTTCGCC GACGTCGCTGCTGGCGCTCACACCCCTCGGCGCGGCGAGCCCGTGCGGCG CCGTGGCGGGAGCTGTGGCGACAGCTGCGACCGCGGCGGGAGCGGCGAAT GTGGCGATTGCGGCAGCACCGGCAGCAGCGGCGGCCGCAATGGCAAGAGC GTCAGCGGCCGGGTCTGCGGGCAATCCGGAGCTGTCGGCTTCCGCGGCGG CGCGAAGCGGCGGAAAAGCGGGGACGGTCGGGCCGCCAGCGGGCATAGGA GGGGGTGACTCCGAAGTGGTTGCTGCATCCGTGGCAGCGGCCGGGGCCGG CGGCGTGCCACGGATCGCTAACCCGTACGCGTGCCAGGGGCAGCCACTGC GCTCCATCCTCGCCAACCCAATGGTACTGCAGCTGCCGCCATCGGAGCTG TTGCTGCCACCGCTACGTCATACGACCTTGAACCTTCCGGAGGCGCTCCG GCCTCAAGCTCCGTCGCCGCCAACTTCTACAGACTCGAACGGGCCGTCGT CAGAAGCGCCCTCTCAATCTTCGCCGATCCCGCCGCCGCTGCCGCTGCGC CCCGAAAACCCTTACAACCGCCCTGTGTGGACGGCAGTTGCGGCGGCCCG TCCGCGTCCCGCCCGCGGCATATCGCTCCCGCCTCAGCCGACGAGGGCCG AGGCCGCGGCGGCAGCGCTGGCGGCAGCTGCCGCCGCCGGCTCGGACGCA TCTACCGGCATGCTCGACCTGCAAGTAGTAGGCCTCAGCGCCACGCTGCC CAACATGGAAGAGGTGGCCGACTGGATGGGGGCGATCCTCTACACGAGCG AGTTCCGGCCGGTGCCGCTCACGGAGCGGGTGCTGCGCAACGGGACCGAG CTGCTCGACCGTAAGGAAAAGCTCGTGCGAACGCTTTTGATCGACGGCGT CGGCTACGGCAGCGGCGGCGGCGAGCCGGCGGCGCAGGGAAAGCGCGCGC GGCGTCCGGACCCGGGGCTTCTGGCGGCGCAAGGGCTGGCGGTGCTGTGC CGCGAATCGGTCGCTGCGGCGAACCAGGTCATCATCTTTTGCTCAACTCG ACAGCACTGCCTCAATTGCGCGCTCGCCGTTGCCAAGGCGCTCGCCCTCT GCCCGCCGCCTGACGACATGGTGGAGCAGCGCGCCGCGCTGCTGACGCGG CTGGCAGCCGCTGTGCCAGCCGGCGCCGGCGCCGATCCGGGCCTGCGGCA GACGGTGCCGGCCGGCGTCGCGTTCCACCACGCGGGGCTAGCAGAGCAGG AGCGCACAGAGATCGAAGCGGCGTACCGCGGTGGCCTGCTGTCGGTACTG GCGGCGACCTCGACACTTGGTGCCGGCGTCAACCTGCCGGCGGCGCGCGT CATCTTCCGTTCGTTGGACGGCGGTGGCGGACGGCTGACAGTCGCCCGCT ACCGCCAGATGGCGGGCCGTGCGGGCCGCGCCGGCGGGAGCGCCCATGGT GAGGCCATCCTGATGGTGGTGACGGCTGCCGAGTACCGAGCTGCGCTGGC GCTCATGAACGCGTCGCTGCCGCGGATGGTAAGCGGTATGTCGCCGCTGC CGCCGGCTCGCGGCGGGGACGGCGGGGCGGCGCTGCTGCGGGCGGTGCTG GAAGGCGTCGCAGGCGGGATGCTCACAAGGTAAGATCTTGTGTTTACAAA TGTTTTAGAAGGGAGAGCAGAGAGCCGGCCTATGCTACCTTATCTAAAAT TTTGGAGAAACATGCCACTGATTGTTACCTGCAGCTTCCCCATCCATTTT CCTACCAGGCGCTTGGAGGTGCGGGACTTCATCGCCAACACACTTTTGTG GCGCCAGTTCAGGGGCACACCAGCCGAAACGGCGGCGTTCTGCACTACGG CTGCCACCGCCGCGGCCGTCGGTGGCGGTGACGACGGCGGCGATGCCGTA AAGTCTCAAGAGTTGCTGGTGCGGTACGCCGAGGCGGCTTTGGACTACCT TCTGCAGCGCGGCTGCGTCTCGCTCTACCACGCACGGCCGGCCGACTACG AGCCTGACGCAGTGGCGCCCGCGACGCCGCCCGTCGGCAGTGGACCGGTC GGAGCGGCGGCCCCGACGGACGGCCCGGCAGCGAACACAGCGACGAAGGA G
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1030:2..3302-

>mRNA_P-wetherbeei_contig1030.1.1 ID=mRNA_P-wetherbeei_contig1030.1.1|Name=mRNA_P-wetherbeei_contig1030.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2157bp|location=Sequence derived from alignment at P-wetherbeei_contig1030:2..3302- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGAAGGCCAACGCGATCCTCAACCGCCTCGTCGCCGCCGGCCGCGC
GGCGGAGCTCTGCATCGTCGTCATCGACGAGCTGCACATGATCGCCGACG
CCGGCCGCGGCCCGCTGCTAGAACTGCTGCTCACCAAGCTGCTGCATCTC
AGCCGCCGCCGCCGACGCCCCGCGGGGTCTTCGCCGACGTCGCTGCTGGC
GCTCACACCCCTCGGCGCGGCGAGCCCGTGCGGCGCCGTGGCGGGAGCTG
TGGCGACAGCTGCGACCGCGGCGGGAGCGGCGAATGTGGCGATTGCGGCA
GCACCGGCAGCAGCGGCGGCCGCAATGGCAAGAGCGTCAGCGGCCGGGTC
TGCGGGCAATCCGGAGCTGTCGGCTTCCGCGGCGGCGCGAAGCGGCGGAA
AAGCGGGGACGGTCGGGCCGCCAGCGGGCATAGGAGGGGGTGACTCCGAA
GTGGTTGCTGCATCCGTGGCAGCGGCCGGGGCCGGCGGCGTGCCACGGAT
CGCTAACCCGTACGCGTGCCAGGGGCAGCCACTGCGCTCCATCCTCGCCA
ACCCAATGGTACTGCAGCTGCCGCCATCGGAGCTGTTGCTGCCACCGCTA
CGTCATACGACCTTGAACCTTCCGGAGGCGCTCCGGCCTCAAGCTCCGTC
GCCGCCAACTTCTACAGACTCGAACGGGCCGTCGTCAGAAGCGCCCTCTC
AATCTTCGCCGATCCCGCCGCCGCTGCCGCTGCGCCCCGAAAACCCTTAC
AACCGCCCTGTGTGGACGGCAGTTGCGGCGGCCCGTCCGCGTCCCGCCCG
CGGCATATCGCTCCCGCCTCAGCCGACGAGGGCCGAGGCCGCGGCGGCAG
CGCTGGCGGCAGCTGCCGCCGCCGGCTCGGACGCATCTACCGGCATGCTC
GACCTGCAAGTAGTAGGCCTCAGCGCCACGCTGCCCAACATGGAAGAGGT
GGCCGACTGGATGGGGGCGATCCTCTACACGAGCGAGTTCCGGCCGGTGC
CGCTCACGGAGCGGGTGCTGCGCAACGGGACCGAGCTGCTCGACCGTAAG
GAAAAGCTCGTGCGAACGCTTTTGATCGACGGCGTCGGCTACGGCAGCGG
CGGCGGCGAGCCGGCGGCGCAGGGAAAGCGCGCGCGGCGTCCGGACCCGG
GGCTTCTGGCGGCGCAAGGGCTGGCGGTGCTGTGCCGCGAATCGGTCGCT
GCGGCGAACCAGGTCATCATCTTTTGCTCAACTCGACAGCACTGCCTCAA
TTGCGCGCTCGCCGTTGCCAAGGCGCTCGCCCTCTGCCCGCCGCCTGACG
ACATGGTGGAGCAGCGCGCCGCGCTGCTGACGCGGCTGGCAGCCGCTGTG
CCAGCCGGCGCCGGCGCCGATCCGGGCCTGCGGCAGACGGTGCCGGCCGG
CGTCGCGTTCCACCACGCGGGGCTAGCAGAGCAGGAGCGCACAGAGATCG
AAGCGGCGTACCGCGGTGGCCTGCTGTCGGTACTGGCGGCGACCTCGACA
CTTGGTGCCGGCGTCAACCTGCCGGCGGCGCGCGTCATCTTCCGTTCGTT
GGACGGCGGTGGCGGACGGCTGACAGTCGCCCGCTACCGCCAGATGGCGG
GCCGTGCGGGCCGCGCCGGCGGGAGCGCCCATGGTGAGGCCATCCTGATG
GTGGTGACGGCTGCCGAGTACCGAGCTGCGCTGGCGCTCATGAACGCGTC
GCTGCCGCGGATGGTAAGCGGTATGTCGCCGCTGCCGCCGGCTCGCGGCG
GGGACGGCGGGGCGGCGCTGCTGCGGGCGGTGCTGGAAGGCGTCGCAGGC
GGGATGCTCACAAGGCGCTTGGAGGTGCGGGACTTCATCGCCAACACACT
TTTGTGGCGCCAGTTCAGGGGCACACCAGCCGAAACGGCGGCGTTCTGCA
CTACGGCTGCCACCGCCGCGGCCGTCGGTGGCGGTGACGACGGCGGCGAT
GCCGTAAAGTCTCAAGAGTTGCTGGTGCGGTACGCCGAGGCGGCTTTGGA
CTACCTTCTGCAGCGCGGCTGCGTCTCGCTCTACCACGCACGGCCGGCCG
ACTACGAGCCTGACGCAGTGGCGCCCGCGACGCCGCCCGTCGGCAGTGGA
CCGGTCGGAGCGGCGGCCCCGACGGACGGCCCGGCAGCGAACACAGCGAC
GAAGGAG
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