mRNA_P-wetherbeei_contig10299.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10299.1.2
Unique NamemRNA_P-wetherbeei_contig10299.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10299.1.2 vs. uniprot
Match: F0Y3L2_AURAN (Aldolase_II domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y3L2_AURAN)

HSP 1 Score: 167 bits (424), Expect = 1.760e-49
Identity = 91/154 (59.09%), Postives = 107/154 (69.48%), Query Frame = 1
Query:   64 NPLNVTAAEWRSRLEAAAATRLLSLYGFGEDLAAQCVMVRVAADGGGHEDAFLMPEWGPFFDEATASSLVKVTFDGDLVDSSTGHASPADASVVNMGCVPVAAAIFRARREVNVILHTHPVAVMAVGGTKDGLLPLSQAAFFLHGVVGRYKYDF 525
            NPL V+A EWR R E AA  R L LYG G+DLAAQCVM+R         D FLM EWG FF+E TAS+L+K  FDG LV+   G  +PA   V NMGC+PVAAAIF+AR +  +++H HP AVMAV G + GLLP+SQAAFFLHG V R  YDF
Sbjct:    1 NPLKVSAREWRDRTELAAVYRALHLYGMGDDLAAQCVMMRTTET----RDEFLMHEWGVFFEEVTASNLLKYDFDGHLVEPD-GSRAPALPDVSNMGCLPVAAAIFKARPDAAMVVHIHPPAVMAVAGMEAGLLPVSQAAFFLHGQVSREGYDF 149          
BLAST of mRNA_P-wetherbeei_contig10299.1.2 vs. uniprot
Match: A0A835YW94_9STRA (Class II aldolase/adducin N-terminal n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW94_9STRA)

HSP 1 Score: 169 bits (429), Expect = 9.930e-49
Identity = 102/180 (56.67%), Postives = 112/180 (62.22%), Query Frame = 1
Query:   46 PEHRE-VNPLNVTAAEWRSRLEAAAATRLLSLYGFGEDLAA--------------------------QCVMVRVAADGGGHEDAFLMPEWGPFFDEATAS-SLVKVTFDGDLVDSSTGHASPADASVVNMGCVPVAAAIFRARREVNVILHTHPVAVMAVGGTKDGLLPLSQAAFFLHGV 501
            PEH    NP+ V+AAEW SR+EAAA  R L LYGF  DLAA                          QCVMVR+     GH +  LM EWG FF+E TAS  LV+V FDG L+DS T   +PA ASVVNMGC+PVA  IFR R EVNVILHTHP AVMAV  TK GLLPLSQAAF  HGV
Sbjct:    4 PEHAHGANPMGVSAAEWESRVEAAAVARALHLYGFSGDLAATTMRARRTSLQXXXXXXXXXXXXXXXQCVMVRLR----GHPEEMLMVEWGVFFEEVTASFGLVRVGFDGTLIDSVTAERTPATASVVNMGCLPVAVPIFRERPEVNVILHTHPHAVMAVAATKAGLLPLSQAAFMFHGV 179          
BLAST of mRNA_P-wetherbeei_contig10299.1.2 vs. uniprot
Match: A0A0G4GMS1_9ALVE (Aldolase_II domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GMS1_9ALVE)

HSP 1 Score: 173 bits (438), Expect = 1.130e-48
Identity = 98/177 (55.37%), Postives = 121/177 (68.36%), Query Frame = 1
Query:    1 ALQIAKNPRVAELLRPEHREVNPLN--VTAAEWRSRLEAAAATRLLSLYGFGEDLAAQCVMVRVAADGGGHEDAFLMPEWGPFFDEATASSLVKVTFDGDLVDSSTGHASPADASVVNMGCVPVAAAIFRARREVNVILHTHPVAVMAVGGTKDGLLPLSQAAFFLHGVVGRYKYDF 525
            A Q+ KNPR  EL   +  + NP    ++ AEW++R+E AA  RLL +YGFG DLAAQC+M R A DG    D  LM EWG FF+E TASS+VKV ++ +LVD  TG  SPA A VVNMGCVPVA +I +AR +VNV+LH HP+ VMAV   ++ L P SQAA   HG + RYKYDF
Sbjct:  206 ANQVYKNPRPVEL---KGVDSNPYKGKISDAEWKARVELAAIGRLLYVYGFGSDLAAQCIMSR-APDG----DGILMNEWGFFFEETTASSIVKVDWEDNLVDLETGERSPARADVVNMGCVPVATSILKARPDVNVVLHIHPIDVMAVASLEEDLQPYSQAAMMFHGQLSRYKYDF 374          
BLAST of mRNA_P-wetherbeei_contig10299.1.2 vs. uniprot
Match: R1EJ36_EMIHU (Aldolase_II domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1EJ36_EMIHU)

HSP 1 Score: 134 bits (338), Expect = 4.760e-35
Identity = 77/139 (55.40%), Postives = 96/139 (69.06%), Query Frame = 1
Query:   82 AAEWRSRLEAAAATRLLSLYGFGEDLAAQCVMVRVAADGGGHEDAFLMPEWGPFFDEATASSLVKVTF-DGD----LVDSSTGHASPADASVVNMGCVPVAAAIFRARREVNVILHTHPVAVMAVGGTKDGLLPLSQAA 483
            ++EW+ RLE AA  R++ +YGFG DLAAQCVM R+  +     D  LM EWG FF+EATASSLVKV F DG     L+ ++ G  +P+   VVN+GCVPV  AIF AR +V  I+H HP AVMAV  T+ GLLPLSQA+
Sbjct:   43 SSEWQDRLELAALARIMYIYGFGSDLAAQCVMARLRDE----PDTMLMNEWGLFFEEATASSLVKVRFGDGTPPEGLLVAADGSVAPSKPDVVNIGCVPVGRAIFEARPDVFSIIHAHPHAVMAVASTEAGLLPLSQAS 177          
BLAST of mRNA_P-wetherbeei_contig10299.1.2 vs. uniprot
Match: UPI0011AAF479 (class II aldolase/adducin family protein n=3 Tax=Candidatus Pelagibacter TaxID=198251 RepID=UPI0011AAF479)

HSP 1 Score: 93.6 bits (231), Expect = 3.230e-20
Identity = 63/142 (44.37%), Postives = 85/142 (59.86%), Query Frame = 1
Query:  100 RLEAAAATRLLSLYGFGEDLAAQCVMVRVAADGGGHEDAFLMPEWGPFFDEATASSLVKVTFDGDLVDSSTGHASPADASVVNMGCVPVAAAIFRARREVNVILHTHPVAVMAVGGTKDGLLPLSQAAFFLHGVVGRYKYDF 525
            RLE +A  R+L +YG   DLA QC   R A D      +F+ P +G F++E TASSLVK+  +G  +DS        D   +N GC+ +A  IF  R +VN  +H H   VMAVGGTK+GL+ LSQAA +L+ +VG   Y+F
Sbjct:    9 RLELSALYRILHMYGM-TDLANQCAGARSAED---KNCSFVHP-YGMFYEEITASSLVKIDQNGKKLDS--------DGPWLNDGCINLAQWIFNKRDDVNFYVHGHANDVMAVGGTKEGLMYLSQAAVYLNHLVGYIDYEF 137          
BLAST of mRNA_P-wetherbeei_contig10299.1.2 vs. uniprot
Match: A0A3R7SY04_9GAMM (Class II aldolase/adducin family protein n=1 Tax=Gammaproteobacteria bacterium TMED50 TaxID=1986763 RepID=A0A3R7SY04_9GAMM)

HSP 1 Score: 92.0 bits (227), Expect = 1.370e-19
Identity = 59/149 (39.60%), Postives = 88/149 (59.06%), Query Frame = 1
Query:   79 TAAEWRSRLEAAAATRLLSLYGFGEDLAAQCVMVRVAADGGGHEDAFLMPEWGPFFDEATASSLVKVTFDGDLV-DSSTGHASPADASVVNMGCVPVAAAIFRARREVNVILHTHPVAVMAVGGTKDGLLPLSQAAFFLHGVVGRYKYD 522
            +  EW++R++ AA  RL++L+    DL    + +RV     G E+ FL+  +G  ++E TASSLVK+  DG++V DS TG+        +N     + +AI RAR  V  ++HTH VA MAV   KDGL+PL+Q A F  G +G + Y+
Sbjct:    6 STTEWQARIDLAACYRLIALFNMN-DLIYNHITLRVP----GEENHFLINAYGLAYEEVTASSLVKIDLDGNIVEDSGTGYG-------INHAGFVIHSAIHRARHNVACVIHTHSVAGMAVSALKDGLMPLTQNAMFF-GEIGYHTYE 141          
BLAST of mRNA_P-wetherbeei_contig10299.1.2 vs. uniprot
Match: UPI00094C9923 (class II aldolase/adducin family protein n=1 Tax=Pelagibacter ubique TaxID=198252 RepID=UPI00094C9923)

HSP 1 Score: 90.5 bits (223), Expect = 4.800e-19
Identity = 59/146 (40.41%), Postives = 88/146 (60.27%), Query Frame = 1
Query:   88 EWRSRLEAAAATRLLSLYGFGEDLAAQCVMVRVAADGGGHEDAFLMPEWGPFFDEATASSLVKVTFDGDLVDSSTGHASPADASVVNMGCVPVAAAIFRARREVNVILHTHPVAVMAVGGTKDGLLPLSQAAFFLHGVVGRYKYDF 525
            ++  R E AA  R+L +YG   DLA QC   R   +    +++F+ P +G F++E TASSLVK+  +G  +++        D   +N GC  +A  IF AR++VN  +H H   VMAVGGTK+GL+ LSQAA +L+ ++G   Y+F
Sbjct:    5 DFNVRCELAALYRILHMYGM-TDLANQCAGARSIEN---KDNSFVHP-YGMFYEEITASSLVKINKEGKAIEN--------DNPWLNDGCNNLAKWIFNARQDVNFYVHGHANDVMAVGGTKEGLMYLSQAAVYLNHLIGYVDYEF 137          
BLAST of mRNA_P-wetherbeei_contig10299.1.2 vs. uniprot
Match: A0A2V6PS53_9BACT (Class II aldolase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6PS53_9BACT)

HSP 1 Score: 90.5 bits (223), Expect = 6.640e-19
Identity = 59/149 (39.60%), Postives = 86/149 (57.72%), Query Frame = 1
Query:   76 VTAAEWRSRLEAAAATRLLSLYGFGEDLAAQCVMVRVAADGGGHEDAFLMPEWGPFFDEATASSLVKVTFDGDLVDSSTGHASPADASVVNMGCVPVAAAIFRARREVNVILHTHPVAVMAVGGTKDGLLPLSQAAFFLHGVVGRYKYD 522
            V+  EW  R++ AAA RL++L+G+ EDL    V   ++A   G ED FL+  +G FFDE TASSLVK+  +GD V+ S           VN     + +A+  AR +   +LHTH +  +AV   +DGLLPLSQ + F+   VG + ++
Sbjct:   16 VSPEEWAVRVDLAAAYRLVALFGW-EDL----VFTHISARVPGTEDQFLINPYGVFFDEITASSLVKIDLNGDKVEESPFP--------VNAAGFIIHSAVHSARHDAKCVLHTHTLNGVAVSAQRDGLLPLSQHSLFVITSVGYHDFE 151          
BLAST of mRNA_P-wetherbeei_contig10299.1.2 vs. uniprot
Match: UPI00094C6CAD (class II aldolase/adducin family protein n=1 Tax=Pelagibacter ubique TaxID=198252 RepID=UPI00094C6CAD)

HSP 1 Score: 90.1 bits (222), Expect = 6.730e-19
Identity = 59/142 (41.55%), Postives = 83/142 (58.45%), Query Frame = 1
Query:  100 RLEAAAATRLLSLYGFGEDLAAQCVMVRVAADGGGHEDAFLMPEWGPFFDEATASSLVKVTFDGDLVDSSTGHASPADASVVNMGCVPVAAAIFRARREVNVILHTHPVAVMAVGGTKDGLLPLSQAAFFLHGVVGRYKYDF 525
            R E +A  R+L +YG   DLA QC   R A D    +D   +  +G F++E TASSLVK+   G  ++S        D   +N GC+ +A  IF +R +VN  +H H   VMAVGGTK+GL+ LSQAA +L+ ++G   Y+F
Sbjct:    9 RCELSALYRILHMYGM-TDLANQCAGARSAED----KDFSFVHPYGMFYEEITASSLVKIDKYGRKINS--------DGPWLNDGCINLAQWIFNSRPDVNFYVHGHANDVMAVGGTKEGLMCLSQAAVYLNHLIGYIDYEF 137          
BLAST of mRNA_P-wetherbeei_contig10299.1.2 vs. uniprot
Match: A0A7L5Z948_9CAUL (Class II aldolase/adducin family protein n=1 Tax=Brevundimonas sp. TaxID=1871086 RepID=A0A7L5Z948_9CAUL)

HSP 1 Score: 90.1 bits (222), Expect = 8.210e-19
Identity = 55/150 (36.67%), Postives = 86/150 (57.33%), Query Frame = 1
Query:   73 NVTAAEWRSRLEAAAATRLLSLYGFGEDLAAQCVMVRVAADGGGHEDAFLMPEWGPFFDEATASSLVKVTFDGDLVDSSTGHASPADASVVNMGCVPVAAAIFRARREVNVILHTHPVAVMAVGGTKDGLLPLSQAAFFLHGVVGRYKYD 522
            NVT AEW+ R+E AAA RL++L+G+ +      +   ++A   G +  FL+  +G +F+E TASSLVKV  DG++V  +T   +PA  ++ +        A+  AR + + +LH H VA + V   K GL+P+SQ A  L   V  + Y+
Sbjct:   12 NVTEAEWQVRVELAAAYRLVALHGWDD-----MIFTHISAKVPGSDGHFLINPYGYYFEEITASSLVKVDLDGNVVQDTTNFINPAGFTIHS--------AVHAARTDAHFVLHLHTVAGVGVAAQKAGLMPISQNACLLQHQVAYHGYE 148          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10299.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0Y3L2_AURAN1.760e-4959.09Aldolase_II domain-containing protein (Fragment) n... [more]
A0A835YW94_9STRA9.930e-4956.67Class II aldolase/adducin N-terminal n=1 Tax=Tribo... [more]
A0A0G4GMS1_9ALVE1.130e-4855.37Aldolase_II domain-containing protein n=1 Tax=Chro... [more]
R1EJ36_EMIHU4.760e-3555.40Aldolase_II domain-containing protein n=1 Tax=Emil... [more]
UPI0011AAF4793.230e-2044.37class II aldolase/adducin family protein n=3 Tax=C... [more]
A0A3R7SY04_9GAMM1.370e-1939.60Class II aldolase/adducin family protein n=1 Tax=G... [more]
UPI00094C99234.800e-1940.41class II aldolase/adducin family protein n=1 Tax=P... [more]
A0A2V6PS53_9BACT6.640e-1939.60Class II aldolase n=1 Tax=Candidatus Rokubacteria ... [more]
UPI00094C6CAD6.730e-1941.55class II aldolase/adducin family protein n=1 Tax=P... [more]
A0A7L5Z948_9CAUL8.210e-1936.67Class II aldolase/adducin family protein n=1 Tax=B... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10299contigP-wetherbeei_contig10299:1..1040 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog44056.XP_009034819.1
Preferred nameADD1
PFAMsAldolase_II
Model size525
Max annot lvl2759|Eukaryota
KEGG koko:K18622
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000212,GO:0000226,GO:0000228,GO:0000793,GO:0000794,GO:0000902,GO:0000904,GO:0001101,GO:0001701,GO:0001709,GO:0001894,GO:0002262,GO:0002376,GO:0002520,GO:0003006,GO:0003008,GO:0003013,GO:0003018,GO:0003674,GO:0003779,GO:0005080,GO:0005102,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005829,GO:0005856,GO:0005886,GO:0005903,GO:0005911,GO:0005912,GO:0005913,GO:0005938,GO:0006807,GO:0006810,GO:0006811,GO:0006884,GO:0006928,GO:0006935,GO:0006950,GO:0006986,GO:0006996,GO:0007010,GO:0007015,GO:0007017,GO:0007049,GO:0007051,GO:0007098,GO:0007154,GO:0007155,GO:0007159,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007282,GO:0007283,GO:0007292,GO:0007293,GO:0007294,GO:0007300,GO:0007301,GO:0007399,GO:0007409,GO:0007411,GO:0007525,GO:0007527,GO:0007610,GO:0007611,GO:0007613,GO:0007614,GO:0007616,GO:0008015,GO:0008064,GO:0008092,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0008290,GO:0008302,GO:0008356,GO:0008361,GO:0009605,GO:0009653,GO:0009790,GO:0009792,GO:0009987,GO:0009994,GO:0010033,GO:0010035,GO:0010038,GO:0010639,GO:0010720,GO:0010927,GO:0014069,GO:0015629,GO:0016020,GO:0016043,GO:0016477,GO:0016604,GO:0019229,GO:0019538,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0020027,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0022607,GO:0022610,GO:0023052,GO:0030029,GO:0030030,GO:0030036,GO:0030054,GO:0030097,GO:0030099,GO:0030100,GO:0030154,GO:0030182,GO:0030218,GO:0030239,GO:0030425,GO:0030507,GO:0030706,GO:0030716,GO:0030723,GO:0030724,GO:0030725,GO:0030832,GO:0030833,GO:0030834,GO:0030835,GO:0030837,GO:0030856,GO:0030858,GO:0030968,GO:0031023,GO:0031032,GO:0031175,GO:0031333,GO:0031410,GO:0031503,GO:0031974,GO:0031981,GO:0031982,GO:0032092,GO:0032271,GO:0032272,GO:0032279,GO:0032501,GO:0032502,GO:0032504,GO:0032526,GO:0032535,GO:0032879,GO:0032956,GO:0032970,GO:0032989,GO:0032990,GO:0032991,GO:0033043,GO:0033554,GO:0033993,GO:0034101,GO:0034620,GO:0034976,GO:0035150,GO:0035183,GO:0035264,GO:0035296,GO:0035324,GO:0035966,GO:0035967,GO:0036477,GO:0036498,GO:0040007,GO:0040011,GO:0042221,GO:0042330,GO:0042493,GO:0042592,GO:0042608,GO:0042692,GO:0042802,GO:0042803,GO:0042995,GO:0043005,GO:0043009,GO:0043062,GO:0043063,GO:0043170,GO:0043197,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043242,GO:0043244,GO:0043254,GO:0043393,GO:0043933,GO:0044057,GO:0044085,GO:0044087,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044309,GO:0044421,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044451,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044703,GO:0044853,GO:0044877,GO:0045121,GO:0045123,GO:0045165,GO:0045169,GO:0045170,GO:0045171,GO:0045172,GO:0045202,GO:0045214,GO:0045478,GO:0045595,GO:0045597,GO:0045601,GO:0045603,GO:0045765,GO:0045766,GO:0045807,GO:0045907,GO:0046982,GO:0046983,GO:0048134,GO:0048135,GO:0048232,GO:0048468,GO:0048471,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048589,GO:0048609,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0048871,GO:0048872,GO:0048873,GO:0050789,GO:0050793,GO:0050794,GO:0050877,GO:0050880,GO:0050890,GO:0050896,GO:0050900,GO:0050901,GO:0051015,GO:0051016,GO:0051017,GO:0051049,GO:0051050,GO:0051094,GO:0051098,GO:0051099,GO:0051128,GO:0051129,GO:0051130,GO:0051146,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051301,GO:0051321,GO:0051493,GO:0051494,GO:0051592,GO:0051641,GO:0051668,GO:0051674,GO:0051693,GO:0051704,GO:0051716,GO:0055001,GO:0055002,GO:0055085,GO:0060249,GO:0060284,GO:0060627,GO:0061061,GO:0061564,GO:0061572,GO:0061756,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070161,GO:0070887,GO:0070925,GO:0071229,GO:0071241,GO:0071248,GO:0071277,GO:0071300,GO:0071310,GO:0071396,GO:0071704,GO:0071840,GO:0071944,GO:0072499,GO:0090066,GO:0097120,GO:0097435,GO:0097447,GO:0097458,GO:0097485,GO:0097708,GO:0097746,GO:0098589,GO:0098590,GO:0098609,GO:0098794,GO:0098805,GO:0098857,GO:0098862,GO:0098984,GO:0099568,GO:0099572,GO:0110053,GO:0120025,GO:0120036,GO:0120038,GO:0120039,GO:1901342,GO:1901550,GO:1901552,GO:1901564,GO:1901700,GO:1901701,GO:1901879,GO:1901880,GO:1902903,GO:1902904,GO:1903046,GO:1903140,GO:1903142,GO:1903391,GO:1903393,GO:1903522,GO:1903524,GO:1904018,GO:2000026,GO:2000249
Exons3
Evalue2.89e-50
EggNOG OGsCOG0235@1|root,KOG3699@2759|Eukaryota
Descriptionactin binding
Cds size525
COG categoryG
BRITEko00000,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185862.3522828-CDS-P-wetherbeei_contig10299:0..481683185862.3522828-CDS-P-wetherbeei_contig10299:0..48Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10299 1..48 -
1683185862.368227-CDS-P-wetherbeei_contig10299:185..5311683185862.368227-CDS-P-wetherbeei_contig10299:185..531Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10299 186..531 -
1683185862.3787131-CDS-P-wetherbeei_contig10299:909..10401683185862.3787131-CDS-P-wetherbeei_contig10299:909..1040Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10299 910..1040 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10299.1.2prot_P-wetherbeei_contig10299.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10299 1..1040 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10299.1.2

>prot_P-wetherbeei_contig10299.1.2 ID=prot_P-wetherbeei_contig10299.1.2|Name=mRNA_P-wetherbeei_contig10299.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=175bp
ALQIAKNPRVAELLRPEHREVNPLNVTAAEWRSRLEAAAATRLLSLYGFG
EDLAAQCVMVRVAADGGGHEDAFLMPEWGPFFDEATASSLVKVTFDGDLV
DSSTGHASPADASVVNMGCVPVAAAIFRARREVNVILHTHPVAVMAVGGT
KDGLLPLSQAAFFLHGVVGRYKYDF
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mRNA from alignment at P-wetherbeei_contig10299:1..1040-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10299.1.2 ID=mRNA_P-wetherbeei_contig10299.1.2|Name=mRNA_P-wetherbeei_contig10299.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1040bp|location=Sequence derived from alignment at P-wetherbeei_contig10299:1..1040- (Phaeothamnion wetherbeei SAG_119_79)
GCGCTCCAGATTGCCAAAAACCCTCGCGTTGCGGAGCTCTTGCGGCCGGA GCATCGTGAGGTTAACCCGCTAAATGTTACCGCGGCCGAATGGCGTTCAC GTCTCGAAGCGGCTGCGGCAACTCGTCTCCTGTAAGTGTGCCCTTTTGGG AGTGAACGTCGGATGCTGGTTTCTTCCCCTTCTCCCGCATTGACTGGGAG GACAATGTAGTCAGAGGTTGCTTGCAAATGTTCATTTACGTTCATGATCA CCTTTGTTCAACGAGGGAGAAAAGGCAAACGGAGCTAACCCCATCATGAT GCTGTCCAACACTTGAATTTGCTTAGACAGTCTGATCCATACCTAAAACC AATTAAGAAGCCTGCCTGCCGAAGCTCTGCTTGCCAACCTCCACAATGAA AAGTAGATTCTGTTCAATCTTTGGTCTTAGTAGTGGTATGGTCCAGGCGT TCCCTCATGCCGTATCCCCGAAACACAACGTTCCTTTTCGCCGGCCTTCC GCCCCGCAGCTCCCTTTACGGCTTTGGAGAGGACCTTGCCGCGCAGTGCG TCATGGTCCGCGTCGCTGCCGACGGCGGCGGCCACGAGGATGCCTTTCTG ATGCCGGAATGGGGCCCCTTTTTCGATGAGGCGACCGCCAGCTCCCTCGT CAAGGTGACGTTCGACGGCGATTTGGTCGACAGCTCCACAGGGCACGCCA GTCCGGCAGACGCGTCAGTGGTGAATATGGGCTGCGTGCCGGTGGCCGCG GCAATATTCCGGGCACGGCGGGAGGTGAATGTGATCTTGCACACGCACCC GGTGGCGGTAATGGCAGTCGGGGGCACCAAGGACGGGCTGCTGCCGCTGT CGCAGGTGAGAGGGACGGAGAGAGAGAAAGAGAAGCCAGTCCAGATGTGT ATGGCCTGATTTTTGTTCTCTGGCTGTAAATGCTCACACTCTCTTGCATG TTTAACGACCGTCCATTTCCCCCTTTTGCTCCGTTTCTGCAGGCGGCCTT CTTCCTACACGGCGTCGTCGGTCGCTACAAGTACGACTTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10299:1..1040-

>mRNA_P-wetherbeei_contig10299.1.2 ID=mRNA_P-wetherbeei_contig10299.1.2|Name=mRNA_P-wetherbeei_contig10299.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=525bp|location=Sequence derived from alignment at P-wetherbeei_contig10299:1..1040- (Phaeothamnion wetherbeei SAG_119_79)
GCGCTCCAGATTGCCAAAAACCCTCGCGTTGCGGAGCTCTTGCGGCCGGA
GCATCGTGAGGTTAACCCGCTAAATGTTACCGCGGCCGAATGGCGTTCAC
GTCTCGAAGCGGCTGCGGCAACTCGTCTCCTCTCCCTTTACGGCTTTGGA
GAGGACCTTGCCGCGCAGTGCGTCATGGTCCGCGTCGCTGCCGACGGCGG
CGGCCACGAGGATGCCTTTCTGATGCCGGAATGGGGCCCCTTTTTCGATG
AGGCGACCGCCAGCTCCCTCGTCAAGGTGACGTTCGACGGCGATTTGGTC
GACAGCTCCACAGGGCACGCCAGTCCGGCAGACGCGTCAGTGGTGAATAT
GGGCTGCGTGCCGGTGGCCGCGGCAATATTCCGGGCACGGCGGGAGGTGA
ATGTGATCTTGCACACGCACCCGGTGGCGGTAATGGCAGTCGGGGGCACC
AAGGACGGGCTGCTGCCGCTGTCGCAGGCGGCCTTCTTCCTACACGGCGT
CGTCGGTCGCTACAAGTACGACTTT
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