mRNA_P-wetherbeei_contig10244.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10244.2.1
Unique NamemRNA_P-wetherbeei_contig10244.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10244.2.1 vs. uniprot
Match: A0A521LAY7_9HYPH (Probable multidrug resistance protein NorM n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LAY7_9HYPH)

HSP 1 Score: 490 bits (1262), Expect = 1.170e-166
Identity = 273/409 (66.75%), Postives = 321/409 (78.48%), Query Frame = 1
Query:    1 GRLGSAELAGLALVFPLLMLMQQMANFSMGGALAGAVARAIGAGRREDAGALVLHGLVIAAIVATAFSGIFLMAGPALYAAMGGSDAVLAAAIDYSNAIFAGALAYWVLSTLTSVVRGTGQVAVLAWVYVAAEILHIGLVPLLVFGWGPVPALGVSGAGAATILSFTASSAFLAAWLASGRTTVRLSLGGVRLQRKLFADILRTGAPLSLQPVLNNVSLALLTVYAGTLGAAALAGVGAAMRLEYLMYPLVFGLGAGVVAMVGTNVGAGLHARAARIAWSAAGMATAVTGAVGLVAIVWPQLWMSLFTDAADVSAAGTSFLVVAALGYAFIGTNTLTQAFQAMGQTLWPLIAVFTRAVLLAVGGWIAIDMLASGVPSRGVTGLASVTALGLALAGIIVAVAFWLRKQGS 1227
            GRLG   LAGLALVFPLLMLMQQMANFSMGGALAGAVARAIGAGRR++A AL +HG+ IA   A  FS + L+AGPA+YA +GG  A LAAA++YSN IFAGALAYW+LS LTS+VRGTGQVA+LAWVYV  E LH+ LVPLLVFG GPVP+LG++GAG ATI++F A++A LA +LASGRT V L L G+RL+ +LFA+ILR G PLSLQPVLNN+SLA LT YAG LG AALAGVGAA+RLEY+MYP+VFGLGA VVAMVGTN+GAG   RA RIAW+AA MA   T  +GL A+ WP+ W +LFT A DV  A   +LV+ A+GY FIG NTLTQAFQAMG+TLWPLIAV  R V++  GGW+ I    SGV      GLA+VTA  L +AG IVA+AF +  +G 
Sbjct:  224 GRLGPEALAGLALVFPLLMLMQQMANFSMGGALAGAVARAIGAGRRDEANALAVHGIAIAVAAAALFSLVLLLAGPAIYALLGGEGATLAAAVEYSNVIFAGALAYWLLSILTSIVRGTGQVALLAWVYVGCEALHLCLVPLLVFGLGPVPSLGIAGAGIATIIAFGAATAALAWFLASGRTAVTLRLRGIRLEARLFAEILRVGVPLSLQPVLNNLSLAALTGYAGALGGAALAGVGAAVRLEYVMYPVVFGLGAAVVAMVGTNIGAGKKERANRIAWTAAAMAVGATALIGLAALAWPRAWAALFTSAPDVVDAAALYLVIVAVGYPFIGMNTLTQAFQAMGRTLWPLIAVVVRTVVIVGGGWVVIAATDSGV-----AGLATVTAASLIVAGAIVAIAFRITSRGE 627          
BLAST of mRNA_P-wetherbeei_contig10244.2.1 vs. uniprot
Match: A0A7V3XK39_9BACT (MATE family efflux transporter n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A7V3XK39_9BACT)

HSP 1 Score: 405 bits (1042), Expect = 2.190e-135
Identity = 223/376 (59.31%), Postives = 285/376 (75.80%), Query Frame = 1
Query:    1 GRLGSAELAGLALVFPLLMLMQQMANFSMGGALAGAVARAIGAGRREDAGALVLHGLVIAAIVATAFSGIFLMAGPALYAAMGGSDAVLAAAIDYSNAIFAGALAYWVLSTLTSVVRGTGQVAVLAWVYVAAEILHIGLVPLLVFGWGPVPALGVSGAGAATILSFTASSAFLAAWLASGRTTVRLSLGGVRLQRKLFADILRTGAPLSLQPVLNNVSLALLTVYAGTLGAAALAGVGAAMRLEYLMYPLVFGLGAGVVAMVGTNVGAGLHARAARIAWSAAGMATAVTGAVGLVAIVWPQLWMSLFTDAADVSAAGTSFLVVAALGYAFIGTNT-LTQAFQAMGQTLWPLIAVFTRAVLLAVGGWIAIDMLASGV 1125
            GR+G + LAGL+LVFPLLMLMQQ+AN +MGGA+A AVARA+GAGRR+DA ALV+HGLVIA  +A  F+   L+AGP++YA MGG  AVLAAA++YSNAIFAGA+A+W L  LTSVVRG GQ  VLA VY AAE LH+ LVP L FG GPVP +G++GA  AT+ SF  SSA LA ++ASGRT + +S   VRL+R+LFA+IL  GAP+SLQPVLNNV+LA LT +  TLG  ALA  GA +RLEY++YPL FGLGAGV+A+VGTNVGAG   RA RIAW+AA +   +T  +G +A+ WP+ W++LF+ +  V  AG ++L VA+LGY F+G    L+ AFQA  + LWPL+AV  R  ++A GGW+A+    +G+
Sbjct:   76 GRMGPSALAGLSLVFPLLMLMQQIANATMGGAIASAVARAMGAGRRDDAAALVVHGLVIAGAMAALFTAGALVAGPSVYAVMGGEGAVLAAAVEYSNAIFAGAVAFWALGALTSVVRGVGQPGVLAAVYTAAEALHVLLVPALAFGVGPVPPMGITGAAVATVTSFLCSSAALAWYVASGRTPLAVSRRAVRLERRLFAEILAVGAPMSLQPVLNNVALAALTAFVATLGPTALAAFGAGIRLEYVLYPLAFGLGAGVLALVGTNVGAGQTVRATRIAWTAAALGAGLTATIGALALAWPRAWVTLFSASEAVQVAGAAYLGVASLGYVFVGLGLPLSSAFQAAARPLWPLLAVAGRVFVVAAGGWVAVHAAGAGL 451          
BLAST of mRNA_P-wetherbeei_contig10244.2.1 vs. uniprot
Match: A0A512NID1_9HYPH (Probable multidrug resistance protein NorM n=1 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NID1_9HYPH)

HSP 1 Score: 402 bits (1032), Expect = 2.860e-134
Identity = 226/402 (56.22%), Postives = 284/402 (70.65%), Query Frame = 1
Query:    1 GRLGSAELAGLALVFPLLMLMQQMANFSMGGALAGAVARAIGAGRREDAGALVLHGLVIAAIVATAFSGIFLMAGPALYAAMGGSDAVLAAAIDYSNAIFAGALAYWVLSTLTSVVRGTGQVAVLAWVYVAAEILHIGLVPLLVFGWGPVPALGVSGAGAATILSFTASSAFLAAWLASGRTTVRLSLGGVRLQRKLFADILRTGAPLSLQPVLNNVSLALLTVYAGTLGAAALAGVGAAMRLEYLMYPLVFGLGAGVVAMVGTNVGAGLHARAARIAWSAAGMATAVTGAVGLVAIVWPQLWMSLFTDAADVSAAGTSFLVVAALGYAFIGTNTLTQAFQAMGQTLWPLIAVFTRAVLLAVGGWIAIDMLASGVPSRGVTGLASVTALGLALAGIIVAVAF 1206
            G LG   LAGLALVFP LMLMQQMAN +MGGA+A +VAR +GAGR E+A AL  H LVIA   A  FS  FL+ GP LY  +G    VLAAA++YSN IFAGA+AYW+L  LTS+VRGTG  A+LAWVY+AAE LHI LVPLLVFGWGP PALG++GAG AT++SF AS+  LA +LASGRT + LS   VR +R+LFA+IL+ GAP+SL PVLNN +LA LT YAG LGA +LA  GAA+RLEYL+YPL F +GA V+AM+G+++GA    RAARIAW    ++      V LVAIV P LWM LF+    + A G  +L +  L Y F+    L  AFQ+  Q  WPL+A+ +R  ++ +GGWIA+++L +G+      G+A VTALGL   G ++  AF
Sbjct:   56 GYLGLDALAGLALVFPFLMLMQQMANMAMGGAIAASVARTLGAGRTEEARALACHALVIATGAAALFSAAFLLGGPELYRLLGERGPVLAAALEYSNVIFAGAIAYWLLGALTSIVRGTGHAAILAWVYIAAEALHIALVPLLVFGWGPFPALGITGAGLATVISFLASATALAIYLASGRTAITLSFTRVRFERRLFAEILKVGAPMSLAPVLNNAALAALTTYAGVLGATSLAAFGAAVRLEYLLYPLNFSMGAAVLAMMGSSIGAKQFGRAARIAWIGLALSAGAMACVSLVAIVGPGLWMGLFSHDLQILADGALYLAIVGLAYPFVAGTLLNSAFQSTRQPQWPLVAMGSRLAVVVLGGWIAVEILQTGL-----VGIAVVTALGLVTMGGVLIGAF 452          
BLAST of mRNA_P-wetherbeei_contig10244.2.1 vs. uniprot
Match: A0A1H8X0J4_9PROT (Probable multidrug resistance protein NorM n=1 Tax=Rhodospirillales bacterium URHD0017 TaxID=1380357 RepID=A0A1H8X0J4_9PROT)

HSP 1 Score: 395 bits (1015), Expect = 1.140e-131
Identity = 223/404 (55.20%), Postives = 283/404 (70.05%), Query Frame = 1
Query:    1 GRLGSAELAGLALVFPLLMLMQQMANFSMGGALAGAVARAIGAGRREDAGALVLHGLVIAAIVATAFSGIFLMAGPALYAAMGGSDAVLAAAIDYSNAIFAGALAYWVLSTLTSVVRGTGQVAVLAWVYVAAEILHIGLVPLLVFGWGPVPALGVSGAGAATILSFTASSAFLAAWLASGRTTVRLSLGGVRLQRKLFADILRTGAPLSLQPVLNNVSLALLTVYAGTLGAAALAGVGAAMRLEYLMYPLVFGLGAGVVAMVGTNVGAGLHARAARIAWSAAGMATAVTGAVGLVAIVWPQLWMSLFTDAADVSAAGTSFLVVAALGYAFIGTNTLTQAFQAMGQTLWPLIAVFTRAVLLAVGGWIAIDMLASGVPSRGVTGLASVTALGLALAGIIVAVAFWL 1212
            G+LG   LAGL+LVFP +MLMQQMAN SMGGA+A AV +AIGAG+R++A ALV+H LVIA +    F+ +F+  GP LY  +GG  AVLAAA+DY N IFAGA+ YW+L  LTSVVR TGQV++LAWVY+ AE LHI LVP+LVFG GP+PALG +GAG AT+ SF  SSA LA WLASGRT+V LSL GVRLQ  +F +ILR G P+S  P+ NN++LA LT YAG LG A+LAG G  +RLEYL+YP+ FGLGAGV+AMV TN+GA    RA RIAW   G++  V   +G++AI  P LW  LFTD  ++  A   +L V  + Y F+  NTL  AFQ+  Q  +PL+A   R +++ +GGWIA     +G+      GL  VT  GL   G ++++AF L
Sbjct:   53 GQLGLEALAGLSLVFPPMMLMQQMANASMGGAMAAAVGKAIGAGKRDEAAALVVHALVIACVAGALFTTLFVGVGPILYGWLGGRGAVLAAALDYGNVIFAGAVVYWLLGALTSVVRATGQVSLLAWVYLGAEALHIVLVPILVFGAGPIPALGATGAGIATVTSFATSSAVLAGWLASGRTSVTLSLRGVRLQPAMFGEILRVGVPMSALPLFNNLALATLTAYAGLLGTASLAGFGIGVRLEYLLYPINFGLGAGVLAMVSTNLGARQFERAGRIAWIGTGLSVGVMWLIGVLAITAPGLWSGLFTDDPEIRRATAIYLGVVGMAYVFVAPNTLMSAFQSTRQPQFPLLAALARLIVVLIGGWIATQAFDTGL-----VGLGIVTFAGLVAMGSVLSLAFLL 451          
BLAST of mRNA_P-wetherbeei_contig10244.2.1 vs. uniprot
Match: A0A831Y692_9BACT (MATE family efflux transporter n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A831Y692_9BACT)

HSP 1 Score: 337 bits (863), Expect = 1.090e-108
Identity = 194/376 (51.60%), Postives = 252/376 (67.02%), Query Frame = 1
Query:    1 GRLGSAELAGLALVFPLLMLMQQMANFSMGGALAGAVARAIGAGRREDAGALVLHGLVIAAIVATAFSGIFLMAGPALYAAMGGSDAVLAAAIDYSNAIFAGALAYWVLSTLTSVVRGTGQVAVLAWVYVAAEILHIGLVPLLVFGWGPVPALGVSGAGAATILSFTASSAFLAAWLASGRTTVRLSLGGVRLQRKLFADILRTGAPLSLQPVLNNVSLALLTVYAGTLGAAALAGVGAAMRLEYLMYPLVFGLGAGVVAMVGTNVGAGLHARAARIAWSAAGMATAVTGAVGLVAIVWPQLWMSLFTDAADVSAAGTSFLVVAALGYAFIGTN-TLTQAFQAMGQTLWPLIAVFTRAVLLAVGGWIAIDMLASGV 1125
            G LGS  LAG++LVFPL+MLMQ M+   MGG +A AVARA+GAGRR DA ALV H  V+A ++A  F+    + GPALY AMGG DAVL AA+ YS  +F GALAYW+ +TL SV+RGTG +A+ A V VA+  L++ L P L+ GWGP+P LG++GA  A++ SFT  S  L  +L SG + VR +L G+R +  LF +ILR GAP SL  ++ N+++ LLT   G  G AALAG G   RLEYL  P+VFGLG+G+V MVGT+VGAG  ARA R+AW+   MA  VTGA+G+VA ++P  W+ LFT   DV A G+ +L +    Y F G    L  A Q  G+ LWPL+A FTR ++   GGW+A   L  G+
Sbjct:   57 GWLGSDALAGVSLVFPLVMLMQTMSAGGMGGGVASAVARALGAGRRADADALVGHACVVALVMAACFALSLGLGGPALYHAMGGRDAVLDAAVRYSRVLFGGALAYWLFNTLGSVIRGTGNMALPATVMVASSALYLALSPALILGWGPLPRLGIAGAATASVASFTLGSLALVGFLLSGGSLVRPTLRGLRFRPALFREILRVGAPGSLNTIVTNLTVILLTALVGPFGGAALAGYGMGARLEYLQIPIVFGLGSGLVTMVGTSVGAGDRARALRVAWAGTAMAAGVTGAIGIVAALFPHAWLGLFTTDPDVLATGSQYLRIVGPCYGFFGAGLALYFASQGAGRLLWPLLAGFTRLIVAGAGGWLAAHWLGGGM 432          
BLAST of mRNA_P-wetherbeei_contig10244.2.1 vs. uniprot
Match: A0A2V6T1E8_9BACT (MATE family efflux transporter n=3 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6T1E8_9BACT)

HSP 1 Score: 333 bits (855), Expect = 9.750e-108
Identity = 193/398 (48.49%), Postives = 265/398 (66.58%), Query Frame = 1
Query:    1 GRLGSAELAGLALVFPLLMLMQQMANFSMGGALAGAVARAIGAGRREDAGALVLHGLVIAAIVATAFSGIFLMAGPALYAAMGGSDAVLAAAIDYSNAIFAGALAYWVLSTLTSVVRGTGQVAVLAWVYVAAEILHIGLVPLLVFGWGPVPALGVSGAGAATILSFTASSAFLAAWLASGRTTVRLSLGGVRLQRKLFADILRTGAPLSLQPVLNNVSLALLTVYAGTLGAAALAGVGAAMRLEYLMYPLVFGLGAGVVAMVGTNVGAGLHARAARIAWSAAGMATAVTGAVGLVAIVWPQLWMSLFTDAADVSAAGTSFLVVAALGYAFIGTN-TLTQAFQAMGQTLWPLIAVFTRAVLLAVGGWIAIDMLASGVPSRGVTGLASVTALGLALAGII 1191
            G LGSA LAG++LV+PL+MLMQ M+   MGG ++ AVARA+GAGRR +A AL  H ++IA +++  F+   L+ GPA+Y AMGG+   L AA+ YS+ +F GA+ YW+L+TL+S+VRGTG +A+ A V   + ++++ L P LV GWGP P LGV+G   A + +F A++  LA +L S R+ VRLSL G+RL+R+LF +ILR GAP SL  +L N+++ L+T   G  G AALAG G  +RLEYL  PLVFG+G+ +VAMVGTNVGAG HARA RIAW+ AG+A A+T ++GL+A   P +W+ LFT  + V A G ++L++    Y F G    L  A Q  G+  WPL A F R  + A GGW+A   L  G+P   V    ++   G  LA  I
Sbjct:   43 GWLGSAALAGVSLVYPLVMLMQTMSAGGMGGGVSSAVARALGAGRRAEAQALAAHAVLIALVMSAVFTAGLLLGGPAVYRAMGGTSEALEAAVTYSHVVFGGAVVYWLLNTLSSIVRGTGTMALPAAVTAGSAVIYLVLAPALVLGWGPFPRLGVAGTATANVTAFGAATLVLAIYLCSSRSPVRLSLRGLRLRRELFWEILRVGAPGSLNTILTNLTVVLMTGLVGPFGTAALAGYGMGVRLEYLQIPLVFGMGSALVAMVGTNVGAGQHARAERIAWTGAGLAAALTASIGLLAAAVPHVWLGLFTGDSHVQAVGATYLLIVGPTYGFFGLGLALYFASQGAGRLAWPLTAGFLRLGVAAAGGWLAGYWLGWGLPGIFVAMALALVVFGATLAAAI 440          
BLAST of mRNA_P-wetherbeei_contig10244.2.1 vs. uniprot
Match: A0A2V7DJK9_9BACT (MATE family efflux transporter n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7DJK9_9BACT)

HSP 1 Score: 322 bits (824), Expect = 2.080e-103
Identity = 197/403 (48.88%), Postives = 264/403 (65.51%), Query Frame = 1
Query:    1 GRLGSAELAGLALVFPLLMLMQQMANFSMGGALAGAVARAIGAGRREDAGALVLHGLVIAAIVATAFSGIFLMAGPALYAAMGGSDAVLAAAIDYSNAIFAGALAYWVLSTLTSVVRGTGQVAVLAWVYVAAEILHIGLVPLLVFGWGPVPALGVSGAGAATILSFTASSAFLAAWLA-SGRTTVRLSLGGVRLQRKLFADILRTGAPLSLQPVLNNVSLALLTVYAGTLGAAALAGVGAAMRLEYLMYPLVFGLGAGVVAMVGTNVGAGLHARAARIAWSAAGMATAVTGAVGLVAIVWPQLWMSLFTDAADVSAAGTSFLVVAALGYAFIGTN-TLTQAFQAMGQTLWPLIAVFTRAVLLAVGGWIAIDMLASGVPSRGVTGLASVTALGLALAGIIVAVA 1203
            G LG+  LAG++LVFPL+MLMQ M+   MGG ++ A+ARA+G GRR +A AL LH +VIA ++  AF+   LMAGPA+YAAMGG+   LAAA+ YSN IF+GA A W+ +TL +V RG+G +A+ A + V   +L +GL P L+FGWGPVP LGV+GAG A +  +  ++A L  +L  S R+ VRL+L GVRL+ + F++IL+ GAP SL  VL N+++ +LT   G  G  ALAG G   RLEYL  PLVFG+G+ +V MVGTNVGAG   RA R+A+  AGMA  +T A+GL A ++P  W+ LF+   DV AAGT++L VA   Y F G    L  A Q  G+ LWPL A   R ++   GGWI I  L  G+      GL++V AL   + G+ +  A
Sbjct:   16 GWLGAETLAGVSLVFPLIMLMQTMSAGGMGGGVSSAIARALGRGRRAEADALALHAVVIAGVMGAAFTTGMLMAGPAIYAAMGGTGGALAAALTYSNVIFSGAFAVWLFNTLANVARGSGNMALPATLVVGGAVLVLGLAPALIFGWGPVPRLGVAGAGLAFVAYYAVAAAVLFIYLLRSHRSLVRLTLSGVRLRARHFSEILKVGAPGSLNTVLTNLTVVVLTGLVGGFGTIALAGYGMGARLEYLQIPLVFGIGSALVTMVGTNVGAGNLRRARRVAFVGAGMAFVLTEAIGLGATLFPGAWLRLFSSDPDVLAAGTTYLRVAGPSYGFFGLGLALYFASQGAGRLLWPLAAGVFRLIVATAGGWIVIHWLGGGL-----AGLSAVIALAFVVFGLTLLTA 413          
BLAST of mRNA_P-wetherbeei_contig10244.2.1 vs. uniprot
Match: A0A2V6W604_9BACT (MATE family efflux transporter n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6W604_9BACT)

HSP 1 Score: 320 bits (821), Expect = 2.720e-102
Identity = 200/402 (49.75%), Postives = 255/402 (63.43%), Query Frame = 1
Query:    1 GRLGSAELAGLALVFPLLMLMQQMANFSMGGALAGAVARAIGAGRREDAGALVLHGLVIAAIVATAFSGIFLMAGPALYAAMGGSDAVLAAAIDYSNAIFAGALAYWVLSTLTSVVRGTGQVAVLAWVYVAAEILHIGLVPLLVFGWGPVPALGVSGAGAATILSFTASSAFLAAWLASGRTTVRLSLGGVRLQRKLFADILRTGAPLSLQPVLNNVSLALLTVYAGTLGAAALAGVGAAMRLEYLMYPLVFGLGAGVVAMVGTNVGAGLHARAARIAWSAAGMATAVTGAVGLVAIVWPQLWMSLFTDAADVSAAGTSFLVVAALGYAFIGTN-TLTQAFQAMGQTLWPLIAVFTRAVLLAVGGWIAIDMLASGVPSRGVTGLASVTALGLALAGIIVAVA 1203
            G LG   LAG+ALVFPL+MLMQ M+   MGG +A AVARA+GAGRR DA ALVLH ++IA +   AF+   L+ GP LY AMGG++  LAAA+ YSN +F GA+A W+ +TL SV+RG G + + A V VA   + + L P L++GWGP P L ++GAG A +  +T  S  LA  L S R  VRLSL GVRL+  LFA+ILR G P +L  V  N+++ +LT   G  G  ALAG G   RLEYLM PLVFGLG+ +V MVGTN+GAG  ARA RIA+    MA A+T  +G++A +WP  WM LFT   DV AAG+++L V    Y F G    L  A Q  G+ LWPL+A FTR  + A  GW  I  L  G+ +     L+ V AL   L G+ +A A
Sbjct:   67 GWLGRDALAGVALVFPLIMLMQTMSAGGMGGGVASAVARALGAGRRRDADALVLHAVLIALVFGAAFTVGMLVGGPRLYRAMGGTEGALAAALMYSNVVFVGAIAVWLFNTLGSVLRGAGNMLLPALVVVAGGPVLVALSPALIWGWGPFPRLDIAGAGVAFVTYYTLGSIVLAVALRSRRNLVRLSLRGVRLRLALFAEILRVGLPGALNTVQTNLTVVVLTGLVGGFGTVALAGYGIGARLEYLMIPLVFGLGSALVTMVGTNMGAGHRARALRIAFVGGAMAFALTETIGIIAALWPAAWMGLFTRDPDVVAAGSAYLRVVGPSYGFFGLGLALYFASQGAGRLLWPLVAGFTRLSVAATAGWAVIHWLGGGLSA-----LSVVIALAFVLFGVTLASA 463          
BLAST of mRNA_P-wetherbeei_contig10244.2.1 vs. uniprot
Match: A0A2V6TY20_9BACT (MATE family efflux transporter n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6TY20_9BACT)

HSP 1 Score: 314 bits (805), Expect = 3.660e-100
Identity = 192/404 (47.52%), Postives = 257/404 (63.61%), Query Frame = 1
Query:    1 GRLGSAELAGLALVFPLLMLMQQMANFSMGGALAGAVARAIGAGRREDAGALVLHGLVIAAIVATAFSGIFLMAGPALYAAMGGSDAVLAAAIDYSNAIFAGALAYWVLSTLTSVVRGTGQVAVLAWVYVAAEILHIGLVPLLVFGWGPVPALGVSGAGAATILSFTASSAFLAAWLASGRTTVRLSLGGVRLQRKLFADILRTGAPLSLQPVLNNVSLALLTVYAGTLGAAALAGVGAAMRLEYLMYPLVFGLGAGVVAMVGTNVGAGLHARAARIAWSAAGMATAVTGAVGLVAIVWPQLWMSLFTDAADVSAAGTSFLVVAALGYAFIGTN-TLTQAFQAMGQTLWPLIAVFTRAVLLAVGGWIAIDMLASGVPSRGVTGLASVTALGLALAGIIVAVAFW 1209
            G LG+  LAG+++ FPL+MLMQ M+   MGG +A A+ARA+GAGR  +A  LV H +VIA  +A AF+ + L  GPA+Y AMG     L AA+ YSN IFAGA A W+ +TL SVVRGTG + + A V + A  + + L P L+FGWGP PALGV+GA  A +  + A +    A+LA+GR+ VRL L  VRL+R+LF DILR GAP  +  V  N+++ LLT   G+ G  ALAG G  +RLEYL  PLVFG G+ +V MVGTN+GAG  ARA R+AW+ A +A  VT A+GL A ++P  W+ LF+   +V   G ++L +    Y F G    L  A Q  G+ LWPL+A  +R V+ A GGWI + +L   + S     +  V AL LAL G +V+VA +
Sbjct:   43 GWLGADALAGVSVTFPLVMLMQTMSAGGMGGGVASAIARALGAGRAAEASRLVAHAIVIALTMACAFTALVLAGGPAIYGAMGARAGALDAALAYSNVIFAGAAAVWLFNTLASVVRGTGNMLLPAGVVLGASPILM-LSPALIFGWGPFPALGVTGAAVAVVAYYGAGTLVFLAYLAAGRSVVRLGLRTVRLERRLFRDILRVGAPSLVNNVQTNLTVVLLTALVGSFGTFALAGYGVGVRLEYLQIPLVFGFGSALVTMVGTNIGAGRSARARRVAWTGAALAAGVTEAIGLTAALFPSQWLGLFSAEPEVLRIGATYLRIVGPAYGFFGLGLALYFASQGAGRLLWPLVAGLSRLVVAAGGGWIVLRLLGPSLAS-----IFIVMALALALFGTVVSVAMY 440          
BLAST of mRNA_P-wetherbeei_contig10244.2.1 vs. uniprot
Match: A0A3N5I761_9BACT (MATE family efflux transporter n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A3N5I761_9BACT)

HSP 1 Score: 314 bits (804), Expect = 4.580e-100
Identity = 183/377 (48.54%), Postives = 244/377 (64.72%), Query Frame = 1
Query:    1 GRLGSAELAGLALVFPLLMLMQQMANFSMGGALAGAVARAIGAGRREDAGALVLHGLVIAAIVATAFSGIFLMAGPALYAAMGGSDAVLAAAIDYSNAIFAGALAYWVLSTLTSVVRGTGQVAVLAWVYVAAEILHIGLVPLLVFGWGPVPALGVSGAGAATILSFTASSAFLAAWLASGRTTVRLSLGGVRLQRKLFADILRTGAPLSLQPVLNNVSLALLTVYAGTLGAAALAGVGAAMRLEYLMYPLVFGLGAGVVAMVGTNVGAGLHARAARIAWSAAGMATAVTGAVGLVAIVWPQLWMSLFTDAADVSAAGTSFLVVAALGYAFIGTN-TLTQAFQAMGQTLWPLIAVFTRAVLLAVGGWIAIDMLASGVP 1128
            G LG + LAG++LV+PL+MLMQ M+   MGG +A AVARA+GAGRR +A AL  H +VIA  +A  F+   L+ GP +Y A+GG+   L AA+ YS  +F GA+ +W+L+TL S+ RGTG +A+ A     + IL++ L P LV GWGP P LGV+G   A +++F  ++  LA  L S R+TVRLS  G+R +R  F +ILR GAP SL  +L N+++ L+T   G  G AALAG G   RLEYL  PLVFG+G+ +VAMVGTNVGAG  ARA R+AW+ AG+A  VT ++GL+A V P+ WM LFT    V A G ++L++    Y F G    L  A Q  G+  WPL A F R  + A GGW+A   L  G+P
Sbjct:   43 GWLGPSALAGVSLVYPLVMLMQTMSAGGMGGGVASAVARALGAGRRAEAQALAAHAVVIALAMAAVFTTGLLLGGPVIYRAIGGTGDALDAALTYSRVVFGGAVVFWLLNTLASIARGTGTMALPAAAISGSAILYLALAPALVMGWGPFPRLGVAGTATANLIAFGLATIVLAVHLCSPRSTVRLSARGLRFRRARFWEILRVGAPGSLNTILTNLTVVLMTGLVGPFGTAALAGYGMGARLEYLQIPLVFGMGSALVAMVGTNVGAGKLARAERVAWTGAGLAAGVTASIGLLAAVVPRAWMGLFTTDPQVQAIGATYLMIVGPAYGFFGLGLALYFASQGAGRLAWPLTAGFARLTVAAAGGWLAGHELGWGLP 419          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10244.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521LAY7_9HYPH1.170e-16666.75Probable multidrug resistance protein NorM n=1 Tax... [more]
A0A7V3XK39_9BACT2.190e-13559.31MATE family efflux transporter n=1 Tax=Candidatus ... [more]
A0A512NID1_9HYPH2.860e-13456.22Probable multidrug resistance protein NorM n=1 Tax... [more]
A0A1H8X0J4_9PROT1.140e-13155.20Probable multidrug resistance protein NorM n=1 Tax... [more]
A0A831Y692_9BACT1.090e-10851.60MATE family efflux transporter n=1 Tax=Candidatus ... [more]
A0A2V6T1E8_9BACT9.750e-10848.49MATE family efflux transporter n=3 Tax=Candidatus ... [more]
A0A2V7DJK9_9BACT2.080e-10348.88MATE family efflux transporter n=1 Tax=Candidatus ... [more]
A0A2V6W604_9BACT2.720e-10249.75MATE family efflux transporter n=2 Tax=Candidatus ... [more]
A0A2V6TY20_9BACT3.660e-10047.52MATE family efflux transporter n=1 Tax=Candidatus ... [more]
A0A3N5I761_9BACT4.580e-10048.54MATE family efflux transporter n=1 Tax=Candidatus ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10244contigP-wetherbeei_contig10244:1148..2383 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog296591.Bpro_3542
PFAMsMatE
Model size1236
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue2e-94
EggNOG OGsCOG0534@1|root,COG0534@2|Bacteria,1MVRV@1224|Proteobacteria,2VIUQ@28216|Betaproteobacteria,4A9JA@80864|Comamonadaceae
DescriptionPFAM multi antimicrobial extrusion protein MatE
Cds size1236
COG categoryV
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185860.8627849-CDS-P-wetherbeei_contig10244:1147..23831683185860.8627849-CDS-P-wetherbeei_contig10244:1147..2383Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10244 1148..2383 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10244.2.1prot_P-wetherbeei_contig10244.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10244 1148..2383 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10244.2.1

>prot_P-wetherbeei_contig10244.2.1 ID=prot_P-wetherbeei_contig10244.2.1|Name=mRNA_P-wetherbeei_contig10244.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=412bp
GRLGSAELAGLALVFPLLMLMQQMANFSMGGALAGAVARAIGAGRREDAG
ALVLHGLVIAAIVATAFSGIFLMAGPALYAAMGGSDAVLAAAIDYSNAIF
AGALAYWVLSTLTSVVRGTGQVAVLAWVYVAAEILHIGLVPLLVFGWGPV
PALGVSGAGAATILSFTASSAFLAAWLASGRTTVRLSLGGVRLQRKLFAD
ILRTGAPLSLQPVLNNVSLALLTVYAGTLGAAALAGVGAAMRLEYLMYPL
VFGLGAGVVAMVGTNVGAGLHARAARIAWSAAGMATAVTGAVGLVAIVWP
QLWMSLFTDAADVSAAGTSFLVVAALGYAFIGTNTLTQAFQAMGQTLWPL
IAVFTRAVLLAVGGWIAIDMLASGVPSRGVTGLASVTALGLALAGIIVAV
AFWLRKQGSEQ*
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mRNA from alignment at P-wetherbeei_contig10244:1148..2383-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10244.2.1 ID=mRNA_P-wetherbeei_contig10244.2.1|Name=mRNA_P-wetherbeei_contig10244.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1236bp|location=Sequence derived from alignment at P-wetherbeei_contig10244:1148..2383- (Phaeothamnion wetherbeei SAG_119_79)
GGTCGCCTGGGCTCGGCCGAGCTGGCGGGCCTCGCCCTGGTCTTTCCGCT CCTGATGCTGATGCAGCAGATGGCCAATTTCAGCATGGGCGGCGCGCTCG CGGGCGCCGTGGCCCGGGCCATCGGCGCCGGACGACGCGAGGACGCGGGT GCACTCGTCCTCCACGGCCTGGTCATCGCCGCCATCGTGGCCACGGCCTT CTCGGGCATATTCCTGATGGCAGGCCCGGCGCTCTACGCCGCGATGGGCG GCAGCGACGCAGTGCTGGCGGCGGCGATCGACTACTCGAACGCGATCTTC GCCGGCGCGCTTGCCTACTGGGTGCTGAGCACGCTCACCAGCGTGGTGCG CGGCACCGGCCAGGTGGCGGTGCTCGCCTGGGTCTATGTCGCGGCCGAGA TCCTGCATATCGGCCTGGTGCCGCTGCTGGTGTTCGGCTGGGGGCCCGTC CCGGCGCTCGGCGTCAGCGGTGCCGGCGCAGCTACGATCCTCTCCTTCAC CGCGTCGTCGGCCTTCCTCGCGGCCTGGCTCGCCTCGGGGCGGACGACGG TGCGATTGTCGCTGGGCGGCGTACGCCTCCAGCGCAAGCTCTTCGCCGAC ATCCTGCGCACCGGTGCGCCGCTGTCGCTGCAGCCGGTCCTGAACAACGT CTCGCTCGCCCTGCTCACGGTCTATGCCGGCACGCTGGGCGCCGCGGCGC TGGCGGGCGTCGGTGCGGCGATGCGGCTCGAGTACCTGATGTACCCGCTG GTGTTTGGCCTGGGCGCCGGCGTCGTGGCGATGGTCGGCACCAATGTCGG CGCGGGACTTCACGCGCGCGCGGCCCGCATCGCCTGGAGCGCCGCCGGCA TGGCCACGGCGGTGACGGGTGCGGTCGGACTTGTCGCCATCGTCTGGCCG CAGCTCTGGATGTCGCTGTTCACCGACGCGGCCGATGTCAGCGCGGCTGG CACCAGCTTCCTCGTCGTCGCCGCACTCGGTTACGCCTTCATCGGCACCA ACACGCTCACGCAGGCATTCCAGGCCATGGGCCAGACCTTGTGGCCCCTG ATCGCCGTCTTCACGCGCGCCGTTCTGCTCGCCGTCGGCGGATGGATCGC GATCGACATGCTGGCGAGCGGCGTCCCGAGTAGGGGCGTGACGGGGCTCG CCAGCGTGACGGCCCTCGGCCTCGCGCTCGCGGGAATTATCGTCGCTGTG GCCTTCTGGCTGCGCAAACAAGGATCCGAACAATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10244:1148..2383-

>mRNA_P-wetherbeei_contig10244.2.1 ID=mRNA_P-wetherbeei_contig10244.2.1|Name=mRNA_P-wetherbeei_contig10244.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1236bp|location=Sequence derived from alignment at P-wetherbeei_contig10244:1148..2383- (Phaeothamnion wetherbeei SAG_119_79)
GGTCGCCTGGGCTCGGCCGAGCTGGCGGGCCTCGCCCTGGTCTTTCCGCT
CCTGATGCTGATGCAGCAGATGGCCAATTTCAGCATGGGCGGCGCGCTCG
CGGGCGCCGTGGCCCGGGCCATCGGCGCCGGACGACGCGAGGACGCGGGT
GCACTCGTCCTCCACGGCCTGGTCATCGCCGCCATCGTGGCCACGGCCTT
CTCGGGCATATTCCTGATGGCAGGCCCGGCGCTCTACGCCGCGATGGGCG
GCAGCGACGCAGTGCTGGCGGCGGCGATCGACTACTCGAACGCGATCTTC
GCCGGCGCGCTTGCCTACTGGGTGCTGAGCACGCTCACCAGCGTGGTGCG
CGGCACCGGCCAGGTGGCGGTGCTCGCCTGGGTCTATGTCGCGGCCGAGA
TCCTGCATATCGGCCTGGTGCCGCTGCTGGTGTTCGGCTGGGGGCCCGTC
CCGGCGCTCGGCGTCAGCGGTGCCGGCGCAGCTACGATCCTCTCCTTCAC
CGCGTCGTCGGCCTTCCTCGCGGCCTGGCTCGCCTCGGGGCGGACGACGG
TGCGATTGTCGCTGGGCGGCGTACGCCTCCAGCGCAAGCTCTTCGCCGAC
ATCCTGCGCACCGGTGCGCCGCTGTCGCTGCAGCCGGTCCTGAACAACGT
CTCGCTCGCCCTGCTCACGGTCTATGCCGGCACGCTGGGCGCCGCGGCGC
TGGCGGGCGTCGGTGCGGCGATGCGGCTCGAGTACCTGATGTACCCGCTG
GTGTTTGGCCTGGGCGCCGGCGTCGTGGCGATGGTCGGCACCAATGTCGG
CGCGGGACTTCACGCGCGCGCGGCCCGCATCGCCTGGAGCGCCGCCGGCA
TGGCCACGGCGGTGACGGGTGCGGTCGGACTTGTCGCCATCGTCTGGCCG
CAGCTCTGGATGTCGCTGTTCACCGACGCGGCCGATGTCAGCGCGGCTGG
CACCAGCTTCCTCGTCGTCGCCGCACTCGGTTACGCCTTCATCGGCACCA
ACACGCTCACGCAGGCATTCCAGGCCATGGGCCAGACCTTGTGGCCCCTG
ATCGCCGTCTTCACGCGCGCCGTTCTGCTCGCCGTCGGCGGATGGATCGC
GATCGACATGCTGGCGAGCGGCGTCCCGAGTAGGGGCGTGACGGGGCTCG
CCAGCGTGACGGCCCTCGGCCTCGCGCTCGCGGGAATTATCGTCGCTGTG
GCCTTCTGGCTGCGCAAACAAGGATCCGAACAATGA
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