mRNA_P-wetherbeei_contig1023.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1023.3.1
Unique NamemRNA_P-wetherbeei_contig1023.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: D7FKR9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKR9_ECTSI)

HSP 1 Score: 332 bits (850), Expect = 7.940e-110
Identity = 180/254 (70.87%), Postives = 208/254 (81.89%), Query Frame = 1
Query:    1 TPPAMERNLFLSALANGKLAAAESDAILTAKRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPHPLQRLSNYESLVAGSVAGAVSAFVTYPLDLARARLAVEVAH---GKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753
            TPPAMERNLFLSALANGKL     D ++T KR++AGGLAGMLAKSVVAPVDRIKILFQVTNERFSF   ++L + I+ LEG +GLW+GNSATMIRVFPYAGTQFM+FD+LKR  LLRK +  P+  QRLSN ESL++GS+AGA SA VTYPLDLARARLAV  A    G+RR    GV  LL +V+++DG +ALY GVTPSL+G+IPYAGIAFSINE AKH+V V++G EP T HKLGIGA A LIAQSCTYPL
Sbjct:   83 TPPAMERNLFLSALANGKLEHHRDDVVITLKRVVAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFKKAEKLFQDILALEGPAGLWKGNSATMIRVFPYAGTQFMMFDSLKRWALLRKTRRDPNAEQRLSNTESLMSGSLAGATSALVTYPLDLARARLAVGHARKLGGRRR--SMGVQELLQTVVRQDGFKALYRGVTPSLLGIIPYAGIAFSINEQAKHKVAVLTGKEPGTFHKLGIGALAGLIAQSCTYPL 334          
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A835ZCX0_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCX0_9STRA)

HSP 1 Score: 307 bits (786), Expect = 5.080e-99
Identity = 165/248 (66.53%), Postives = 191/248 (77.02%), Query Frame = 1
Query:    1 TPPAMERNLFLSALANGKLAAAESDAILTAKRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPHPLQRLSNYESLVAGSVAGAVSAFVTYPLDLARARLAVEVA---HGKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQ 735
            TPPAMERNLFLSALANG LA    D ++T KR+ AGGLAGMLAKS VAPVDRIKILFQVTNE FSF  V+ + R I++LEG  GLWRGNSATMIRVFPYAGTQFM+FDTLKR IL ++         RL N ESL+ GS+AG +SAFVTYPLDLARAR+AV      HG +   P GV   L +++K DG RALY GVTPSL+G+IPYAGIAF+INE  KHEVRV++G EP T+HKL IGAFA L+ +
Sbjct:  205 TPPAMERNLFLSALANGTLAHHRDDVVVTVKRVFAGGLAGMLAKSFVAPVDRIKILFQVTNEAFSFRKVKVMGRRIVDLEGIGGLWRGNSATMIRVFPYAGTQFMMFDTLKRFILSKRNDPEHSHATRLKNVESLMCGSIAGGISAFVTYPLDLARARMAVSSVSRPHGLKHRRP-GVLKTLEALVKDDGARALYRGVTPSLVGIIPYAGIAFTINEHLKHEVRVITGLEPATVHKLLIGAFAGLVFE 451          
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A4D9D1I9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1I9_9STRA)

HSP 1 Score: 219 bits (558), Expect = 9.280e-66
Identity = 134/274 (48.91%), Postives = 162/274 (59.12%), Query Frame = 1
Query:   73 DAILTAKRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPHPLQRLSNYESLVAGSVAGAVSAFVTYPLDLARARLAVEVAHGK---RRYEPRG--------------------------------------------VASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753
            +AI TAK I+AGGLAGM+AKSVVAPVDRIKILFQV++E F    V  + R I   EG  GLW+GNSATM+RVFPYAG QFM FDT+K  IL    +       +L+N ESL AGS AG VS   TYPLD ARARLAVE A G    RR+ P G                                            V  +  +  +  G  +LY GVTP+L+G++PYAGIAF+IN+ A H++  ++G EP+TL KLG GAFA L AQS TYPL
Sbjct:   45 NAISTAKSIMAGGLAGMVAKSVVAPVDRIKILFQVSSEEFCLRKVLFIMRRIYHEEGFGGLWKGNSATMLRVFPYAGIQFMTFDTVKAYILKMNGEVEGG---QLTNLESLFAGSFAGFVSCTCTYPLDFARARLAVEGAQGAQYLRRHMPAGGRGVGVERASTSSVSHALQDGEKAGGKLGSKRVLANGAGRAHHTVLDVFKAAYREGGILSLYRGVTPTLLGILPYAGIAFTINDKANHQIHRLTGEEPSTLQKLGCGAFAGLAAQSATYPL 315          
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A7R9WEJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WEJ9_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.430e-60
Identity = 112/240 (46.67%), Postives = 156/240 (65.00%), Query Frame = 1
Query:   91 KRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPHPLQR---------------LSNYESLVAGSVAGAVSAFVTYPLDLARARLAV----EVAHGKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753
            + +LAGG+AGM+AK+ VAP+DRIKIL+Q+++  F    V  +A  I++ EG + LW+GN  TMIRVFPY+G QFMVFD +K   + R    + H L                 LS  ESLV+GS+AGAVS   TYPLDL RA+LAV      A GK+ Y+     ++  +  K+ G + LY G+TP+L+G++PY+GIAF+INE  K +++ ++G EPTT+ K+  GA + LIAQS TYPL
Sbjct:   37 RNLLAGGIAGMVAKTFVAPIDRIKILYQISSAHFRLRDVPGVAFKIVKTEGITALWKGNMVTMIRVFPYSGIQFMVFDRIKMNFIRRHEHEKSHWLTETTSPHDKETKPKKWGLSPGESLVSGSLAGAVSVMCTYPLDLTRAQLAVLRKKRDASGKKIYQR--FPTVFANNYKKGGVKGLYRGITPTLLGILPYSGIAFTINEQGKRQIQHMTGREPTTVEKMQCGALSGLIAQSMTYPL 274          
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A7S1YF97_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1YF97_9STRA)

HSP 1 Score: 201 bits (510), Expect = 2.370e-59
Identity = 113/227 (49.78%), Postives = 150/227 (66.08%), Query Frame = 1
Query:   91 KRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPH---PLQR---LSNYESLVAGSVAGAVSAFVTYPLDLARARLAVEVAHGKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753
            + +LAGG+AGM AKSVVAP+DRIKIL+QV+ + F    V ++ R I++ EG + LW+GN+ATMIRVFPYAG QFMVFD  K   L +  + R H   P  R   LS  ESL+AGS+AGA+S   TYPLD+ RA+LAV   H  R         +LG      G R L+ G+TP+L+G++PY+G AF++NE  K  +R +   EPTT+ K+  GA + LIAQ+ TYPL
Sbjct:   46 RNLLAGGIAGMAAKSVVAPMDRIKILYQVSAKEFHMSDVPRMGRRIVKDEGITALWKGNTATMIRVFPYAGVQFMVFDRCKGYFLEKHERRRRHGYHPEGRAWGLSASESLIAGSLAGAISVACTYPLDMTRAQLAVMKKH--RNQHNMNFVQVLGQNYAERGVRGLFRGITPTLLGILPYSGSAFAMNEQGKRYLRHLQNHEPTTIQKMECGAVSGLIAQTLTYPL 270          
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A7S2EJQ0_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EJQ0_TRICV)

HSP 1 Score: 201 bits (511), Expect = 2.500e-59
Identity = 110/238 (46.22%), Postives = 157/238 (65.97%), Query Frame = 1
Query:   91 KRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPHPLQRL-------------SNYESLVAGSVAGAVSAFVTYPLDLARARLAV----EVAHGKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753
            + +LAGG+AGM+AK+ VAP+DRIKIL+Q+++  F    V  +A  II  EG + LW+GN+ATMIRVFPY+G QFMVFD +K   L+R     P    +L             S +ESL++G++AGAVS   TYPLDL RA+LAV      A G++ ++     S+L +  K  G + LY G+TP+L+G++PY+GIAF+INE AK ++  ++  +PTT+ K+  GA + L+AQS TYPL
Sbjct:   36 RNLLAGGIAGMVAKTFVAPIDRIKILYQISSAHFRLRDVPGVAVKIIRTEGVAALWKGNTATMIRVFPYSGIQFMVFDRIKTHFLMRHKHDVPQHAPKLDSTEKVKSRKWGLSPFESLISGALAGAVSVVSTYPLDLTRAQLAVLKRKRDATGRKIHQ--SFPSVLFANYKNGGVKGLYRGITPTLLGILPYSGIAFTINEQAKRQIHHITHRDPTTVEKMQCGALSGLVAQSMTYPL 271          
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A7S2V5Q5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5Q5_9STRA)

HSP 1 Score: 195 bits (495), Expect = 1.920e-57
Identity = 109/221 (49.32%), Postives = 148/221 (66.97%), Query Frame = 1
Query:   91 KRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPHPLQRLSNYESLVAGSVAGAVSAFVTYPLDLARARLAVEVAHGKRRYEPRGVASL-LGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYP 750
            KR +AGGLAGM AK+VVAPV+R+KI+FQVTNE FS   +    ++++  EG  GLW+G SATM+RVFPYAG QFM FD LK+  +   +   P     LS  ++ V G+ AG++S  +TYPLDL R  +AVE    K+ Y P+   S+ L  +LK +G   LY G+TP++MG++PYAGIAFS+NE+ K  ++   G  P+T+ KL  G FA L+AQS  YP
Sbjct:   15 KRGVAGGLAGMAAKAVVAPVERLKIMFQVTNEPFSVRHLVNGFQTVLRKEGVPGLWKGYSATMLRVFPYAGIQFMTFDYLKKTTMAMNSSECP----TLSPPQNFVCGAAAGSISILITYPLDLLRTMMAVE--RSKKTYVPKASLSMTLRIMLKEEGFLGLYRGLTPTMMGILPYAGIAFSVNEYLKEALKR-RGQPPSTVEKLMAGGFAGLLAQSAAYP 228          
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A7S2UB48_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UB48_9STRA)

HSP 1 Score: 192 bits (487), Expect = 6.880e-56
Identity = 108/228 (47.37%), Postives = 148/228 (64.91%), Query Frame = 1
Query:   88 AKRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRILLRKAQARPHPLQRLSNYESLVAGSVAGAVSAFVTYPLDLARARLAVEVAHGKRRYEPRGVAS------LLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753
            A+ +LAGGLAGM+AKS+VAP+DRIKI++QVT+  F    V  +A  I++ EG S LW+GNSATMIRVFPY+G QFMVF   K   L +    R   +  +S  ESL+AGS AG VS   TYPLDL RA+LAV      ++ +  G+        +L S  K  G + L+ G+ P+L+G++PY+GIAF+INE  K +++ V   +PT + K+  GA + L AQ+ TYPL
Sbjct:   66 ARNLLAGGLAGMVAKSIVAPLDRIKIMYQVTSAHFRLRNVPGVASRIVKEEGFSALWKGNSATMIRVFPYSGIQFMVFHKCKTHYLNK--HDRDQRIHGISPLESLMAGSFAGVVSVICTYPLDLTRAQLAV-----LKKKKSGGIGGQHPFVYVLTSNYKNGGVKGLFRGIFPTLLGILPYSGIAFTINEQGKRKIQNVFDRDPTNIEKIQCGALSGLFAQTLTYPL 286          
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A6V2HRU9_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2HRU9_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.910e-55
Identity = 114/255 (44.71%), Postives = 155/255 (60.78%), Query Frame = 1
Query:   91 KRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRIL-------LRKAQARPHPLQR------------------------LSNYESLVAGSVAGAVSAFVTYPLDLARARLAV---EVAHGKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753
            + +++GGLAGM+AKSVVAP+DRIKIL+Q+T   F    V  +A SI + EG S LW+GN ATM+RVFPY+G QFMVFD  K   L       LR+   RP    +                        LS  ESL++G VAG +S  +TYPLDL RA+LAV   E +    R + +G  S+L    +  G   LY G+TP+L+G++PY+GIAF+INE AK E++ ++  EPTT+ ++  GA + L+AQS TYPL
Sbjct:   30 RNLISGGLAGMVAKSVVAPIDRIKILYQITATPFHLRHVPNVAYSIAQTEGLSALWKGNFATMLRVFPYSGIQFMVFDRCKMYFLGQHELERLRRRNTRPPSTIKGKMDDDFEDEAVALLARRKTDKFGLSPLESLLSGMVAGTLSVIITYPLDLTRAQLAVLKKEKSSNTTR-KTKGFVSVLFGNYRNGGIVGLYRGITPTLLGILPYSGIAFTINEQAKREIQHLTKREPTTVERMQCGAVSGLVAQSLTYPL 283          
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Match: A0A448Z804_9STRA (Lysine--tRNA ligase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z804_9STRA)

HSP 1 Score: 196 bits (497), Expect = 1.510e-53
Identity = 112/231 (48.48%), Postives = 150/231 (64.94%), Query Frame = 1
Query:   91 KRILAGGLAGMLAKSVVAPVDRIKILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQFMVFDTLKRRIL------LRKAQA----RPHPLQRLSNYESLVAGSVAGAVSAFVTYPLDLARARLAVEVAHGKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIPYAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL 753
            + ILAGGLAGM+AKS VAP DRIKIL+QV++  F    V  +A+ II+ EG S LW+GN+AT+IRVFPY+G QFMVFD  K  +L       R+ +A     P P+  LS  ESL AG  AGAVS   TYPLDL R++LAV      R     G  + L S  +  G   L+ G+TP+LMG++PY+G+AFS NE AK +++ ++G + TT+ ++  GA + L AQ+ TYPL
Sbjct:  753 RNILAGGLAGMIAKSFVAPFDRIKILYQVSSAEFHIKYVPGIAKRIIQTEGLSALWKGNTATLIRVFPYSGIQFMVFDRCKTYLLKEQELNYRREKALHPDTPKPIWGLSPLESLCAGMAAGAVSVVATYPLDLTRSQLAVLKTKKGRSSSNVGFGAALLSNYRDRGAVGLFRGITPTLMGILPYSGLAFSFNEQAKRKIQNMTGRDLTTIERMQCGALSGLFAQTVTYPL 983          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1023.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKR9_ECTSI7.940e-11070.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZCX0_9STRA5.080e-9966.53Mitochondrial carrier domain-containing protein n=... [more]
A0A4D9D1I9_9STRA9.280e-6648.91Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7R9WEJ9_9STRA1.430e-6046.67Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S1YF97_9STRA2.370e-5949.78Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2EJQ0_TRICV2.500e-5946.22Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2V5Q5_9STRA1.920e-5749.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2UB48_9STRA6.880e-5647.37Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A6V2HRU9_9STRA2.910e-5544.71Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A448Z804_9STRA1.510e-5348.48Lysine--tRNA ligase n=1 Tax=Pseudo-nitzschia multi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1023contigP-wetherbeei_contig1023:5648..8104 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FKR9
PFAMsMito_carr
Model size753
Max annot lvl2759|Eukaryota
KEGG koko:K15085
KEGG TC2.A.29.12.2
Hectar predicted targeting categoryother localisation
Exons6
Evalue3.37e-107
EggNOG OGsKOG0752@1|root,KOG0752@2759|Eukaryota
Ec32 ortholog descriptionMitochondrial carrier domain
Ec32 orthologEc-21_001880.1
Descriptionmitochondrial transport
Cds size741
COG categoryU
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1023.3.1prot_P-wetherbeei_contig1023.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1023 5660..8104 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185860.2339725-UTR-P-wetherbeei_contig1023:5647..56591683185860.2339725-UTR-P-wetherbeei_contig1023:5647..5659Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1023 5648..5659 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185860.2472215-CDS-P-wetherbeei_contig1023:5659..57881683185860.2472215-CDS-P-wetherbeei_contig1023:5659..5788Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1023 5660..5788 +
1683185860.2584622-CDS-P-wetherbeei_contig1023:6044..61371683185860.2584622-CDS-P-wetherbeei_contig1023:6044..6137Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1023 6045..6137 +
1683185860.2686477-CDS-P-wetherbeei_contig1023:6413..65501683185860.2686477-CDS-P-wetherbeei_contig1023:6413..6550Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1023 6414..6550 +
1683185860.2771015-CDS-P-wetherbeei_contig1023:7054..71981683185860.2771015-CDS-P-wetherbeei_contig1023:7054..7198Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1023 7055..7198 +
1683185860.2851977-CDS-P-wetherbeei_contig1023:7557..76991683185860.2851977-CDS-P-wetherbeei_contig1023:7557..7699Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1023 7558..7699 +
1683185860.294114-CDS-P-wetherbeei_contig1023:8008..81041683185860.294114-CDS-P-wetherbeei_contig1023:8008..8104Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1023 8009..8104 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1023.3.1

>prot_P-wetherbeei_contig1023.3.1 ID=prot_P-wetherbeei_contig1023.3.1|Name=mRNA_P-wetherbeei_contig1023.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=247bp
MERNLFLSALANGKLAAAESDAILTAKRILAGGLAGMLAKSVVAPVDRIK
ILFQVTNERFSFHGVQQLARSIIELEGHSGLWRGNSATMIRVFPYAGTQF
MVFDTLKRRILLRKAQARPHPLQRLSNYESLVAGSVAGAVSAFVTYPLDL
ARARLAVEVAHGKRRYEPRGVASLLGSVLKRDGPRALYCGVTPSLMGVIP
YAGIAFSINEWAKHEVRVVSGTEPTTLHKLGIGAFAVLIAQSCTYPL
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mRNA from alignment at P-wetherbeei_contig1023:5648..8104+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1023.3.1 ID=mRNA_P-wetherbeei_contig1023.3.1|Name=mRNA_P-wetherbeei_contig1023.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2457bp|location=Sequence derived from alignment at P-wetherbeei_contig1023:5648..8104+ (Phaeothamnion wetherbeei SAG_119_79)
ACGCCGCCGGCGATGGAGCGCAACCTGTTCCTGTCGGCGCTGGCGAACGG CAAGCTCGCGGCGGCGGAGAGCGACGCCATCCTCACCGCCAAGCGCATCC TCGCTGGCGGCCTTGCCGGCATGCTCGCAAAATCCGTCGTGGTGAGTACT GCTCTCCGCTCGCTTTCTGGGCTTGTAGTAGGCGACTTTTTGGGGGGCTT TCTGCGACTTTCTGGCGGTCACTTCGACTCGACATTTCATATTCCCCATA TCAGCAGCTCTGATGATGTCTGGTGCGCAGTTCCTTGTGGGCGAAGGAGA GGCATGGAAAAACAATGTACGACTGCTGCAGTGACTTTTTCGCCTTGCTC TCATTGTGTCCTTGCTCTTTCTTGGTCCGCCGCTCTTTCCGCGGCAGGCC CCGGTGGACAGAATAAAGATCTTGTTTCAGGTTACGAACGAGCGCTTCAG CTTCCACGGCGTGCAGCAGCTGGCGCGGTCCATTATCGAGGTAGGGGGCT CCGGCGTTGGCCGTTCGCAATCTGTTTGACTTTCCGGAGGTTCTGGATGC TGCGACTGTTCGTAGGTAGATGTGTAAAATTGTTGCTTTTTGCATTGCGG ACTGCGAGGTCTGCTGTGAGGTCTCTCATTACCTCTCCGGCGCAGCAAAG ACCCGGTTGTCGTTTGCGCTGTAAGCCGTTTCAGCCACCTCGCATTAGCC CCCAATGCTTTCCTTTCCACATGTTCCGCTTCTCTCTCTCCCCCCTTCCA TTTTCTGAGAGTGCAGCTAGAGGGCCATTCGGGGCTGTGGCGGGGCAATA GCGCCACCATGATCCGGGTCTTCCCGTACGCGGGCACACAGTTCATGGTG TTCGACACGCTCAAGCGGCGCATCCTGCTGCGCAAGGCCCAGGCCCGACC GCAGTCAAATCCGAACAAGTGAGTAACGGTGGTAGTGTTTTAACCTTGTC GTCTTGCAGCGTTTGTGGACAGCTGTTCTGCTGTAGTAGCGCGTGCGGGC GGGTGGAGGGGCGGGGATCTTCAGCGCGTGCAAGAGGCGGGATTGAACCG CGTGCAAGATGCTCACGCGTTGCCAGCTCTCCTGCATCGCCGCCCGTCGC GCTATTTTTCCACGTGCTTGGTGCCTCGGGACCGCAAGCTTTTTTACCCG CGTCTCCCTGCCGGCGTGGTCGTCGTTGTCCTTCACCGCTGCGCGTGCCG CCGCCGCCGCTGCCGCCGGCGCTGCCTTCGCCGATGACGCCGCCGTTGCT GTTACCGTTGCCGTTGCCGCCATTGCCGCCGTCACCGCCACTGCCGTTGC CGCCTTCGCCGCCGCCTTCGCGTCCGCCCCCGTTGCCGCTGCTATTACCA CCGCCGCCGACGCTGCCATCGGCACCGCCGCCGCTTTCCGTCCCACCTTT TCGGCAGCCCGCTACAGCGGCTGTCGAACTACGAGAGTCTGGTGGCAGGC TCCGTCGCCGGTGCCGTGTCGGCCTTCGTGACGTACCCGCTGGATCTCGC GCGGGCGCGGCTCGCTGTCGAGGTGGCGCACGGCAAGAGGAGGTACGAGC CGTGAGAAGTTGGTTTGCGGCTCCGCCGCTGGAGGTGATGGGTGGTTGGC GGAGGAAGGTGCCATGGCGGCTTGGGTTGTTGACAGGAAGCGTACTTCTT AGCGTGGACGGTTTTTAGAGCTTGCTTCCGCTGGCTTGTCGCCAATCCGC AGGCAAGGGTGTCTGAGTCACGGCTGGGTATTCGGAAGGGGGTCTTTTGG CTGTACATAGCATTTTGCTCCCACGTCTGCTTGCAATCGCCTTTCCATAA CGCGAAACGACTTGTACTCAACGTCATACGCCTCCCTCTTACTTCCTGTG CCTCACTGAATCGACTCGCTGGTCCGCCGACGGCCGACCGGCTGGTGGGT GGGGGAAAAGGCGCGGCGTAGCGTCACTGCTGGGGTCAGTGCTGAAGCGG GACGGCCCACGGGCGCTCTACTGCGGCGTGACGCCGAGCCTCATGGGGGT GATCCCGTACGCCGGCATCGCCTTCAGCATCAACGAGTGGGCAAAGCACG AGGTCAGTTTTGATTTCGTGCGGGGTCAGTGTGCTTATTCGCACGGGGAT TCGTGTTTCAATGCCTTTTGAACTGCAGCCAATCTTTGGCTTGGCCGGCT TTTGCTGGTCTTCGTCTCCTTCAGATAGCAGCATTGGCGTTTTTGCAATT TGTGTTAGTCGGAAGGCGTGTAGGAAAGGGAGTTGTGCCTCTTGTGTGGT CGGGCGCTTCGGTTGGCAAACCTTTACGGATCCGGTTCGACACCGTAACG ATACCATACCGACGCCATTTTCCCTCATACGCTCTGCCTGCCCCCGCCTC TGTCCGGCCAGGTGCGAGTGGTGAGTGGGACGGAGCCGACGACACTGCAC AAGCTCGGCATCGGCGCCTTCGCGGTGCTCATCGCGCAAAGCTGCACCTA CCCGCTA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1023:5648..8104+

>mRNA_P-wetherbeei_contig1023.3.1 ID=mRNA_P-wetherbeei_contig1023.3.1|Name=mRNA_P-wetherbeei_contig1023.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=741bp|location=Sequence derived from alignment at P-wetherbeei_contig1023:5648..8104+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGCGCAACCTGTTCCTGTCGGCGCTGGCGAACGGCAAGCTCGCGGC
GGCGGAGAGCGACGCCATCCTCACCGCCAAGCGCATCCTCGCTGGCGGCC
TTGCCGGCATGCTCGCAAAATCCGTCGTGGCCCCGGTGGACAGAATAAAG
ATCTTGTTTCAGGTTACGAACGAGCGCTTCAGCTTCCACGGCGTGCAGCA
GCTGGCGCGGTCCATTATCGAGCTAGAGGGCCATTCGGGGCTGTGGCGGG
GCAATAGCGCCACCATGATCCGGGTCTTCCCGTACGCGGGCACACAGTTC
ATGGTGTTCGACACGCTCAAGCGGCGCATCCTGCTGCGCAAGGCCCAGGC
CCGACCGCACCCGCTACAGCGGCTGTCGAACTACGAGAGTCTGGTGGCAG
GCTCCGTCGCCGGTGCCGTGTCGGCCTTCGTGACGTACCCGCTGGATCTC
GCGCGGGCGCGGCTCGCTGTCGAGGTGGCGCACGGCAAGAGGAGGTACGA
GCCGCGCGGCGTAGCGTCACTGCTGGGGTCAGTGCTGAAGCGGGACGGCC
CACGGGCGCTCTACTGCGGCGTGACGCCGAGCCTCATGGGGGTGATCCCG
TACGCCGGCATCGCCTTCAGCATCAACGAGTGGGCAAAGCACGAGGTGCG
AGTGGTGAGTGGGACGGAGCCGACGACACTGCACAAGCTCGGCATCGGCG
CCTTCGCGGTGCTCATCGCGCAAAGCTGCACCTACCCGCTA
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