mRNA_P-wetherbeei_contig10223.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10223.2.1
Unique NamemRNA_P-wetherbeei_contig10223.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10223.2.1 vs. uniprot
Match: A0A7K1B1U1_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K1B1U1_9ACTN)

HSP 1 Score: 209 bits (532), Expect = 2.590e-67
Identity = 101/140 (72.14%), Postives = 121/140 (86.43%), Query Frame = 1
Query:    1 MKAAILVESLTGHTWKAGELIAGNLQQEGWTITGVNRVRQPDFAAIQDADIVLVGTWVHGLFVVGQAPWALAAISQLPAMRGKRAAAFCTFALNPAKTLDKMTAAITGLGADVVGGLALNRSKLEAHAEEFAARLVANVP 420
            MKAA+L+ESLTG+TW AGE IA  LQQEGW+ITG++RVR+PD AAIQDAD V+VGTWVHGLFVVGQAPW L AI +LP MRGK+AA FCTFALNP  TLDK+T+++ G GADV+GG+ALNRSKL+ H+E F  RL+AN+P
Sbjct:    1 MKAALLIESLTGNTWTAGEKIASLLQQEGWSITGLSRVREPDHAAIQDADFVIVGTWVHGLFVVGQAPWGLGAIDKLPMMRGKKAATFCTFALNPGTTLDKLTSSVMGRGADVLGGVALNRSKLDEHSEVFVDRLLANLP 140          
BLAST of mRNA_P-wetherbeei_contig10223.2.1 vs. uniprot
Match: A0A6I3WMS0_9ACTN (Flavodoxin-like domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I3WMS0_9ACTN)

HSP 1 Score: 204 bits (518), Expect = 3.400e-65
Identity = 102/141 (72.34%), Postives = 119/141 (84.40%), Query Frame = 1
Query:    1 MKAAILVESLTGHTWKAGELIAGNLQQEGWTITGVNRVRQPDFAAIQDADIVLVGTWVHGLFVVGQAPWALAAISQLPAMRGKRAAAFCTFALNPAKTLDKMTAAITGLGADVVGGLALNRSKLEAHAEEFAARLVANVPA 423
            M AAILVESLTG+TWKA EL+A NLQQ GW ITG+++V++PD A+IQ ADIVL+GTW HGLFVVGQAP   A ISQLP MRGK+AA FCTFALNPAKTLDKMT  ++GLGADV+GGLA+NR  L+ +AEEFA RL+  VPA
Sbjct:    1 MNAAILVESLTGNTWKAAELVAANLQQAGWGITGLSKVKEPDHASIQQADIVLIGTWTHGLFVVGQAPAGAALISQLPVMRGKQAAVFCTFALNPAKTLDKMTRIVSGLGADVIGGLAMNRRHLDRNAEEFAMRLLDAVPA 141          
BLAST of mRNA_P-wetherbeei_contig10223.2.1 vs. uniprot
Match: A0A6I3F2V7_9ACTN (Flavodoxin-like domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6I3F2V7_9ACTN)

HSP 1 Score: 201 bits (511), Expect = 4.360e-64
Identity = 101/140 (72.14%), Postives = 117/140 (83.57%), Query Frame = 1
Query:    1 MKAAILVESLTGHTWKAGELIAGNLQQEGWTITGVNRVRQPDFAAIQDADIVLVGTWVHGLFVVGQAPWALAAISQLPAMRGKRAAAFCTFALNPAKTLDKMTAAITGLGADVVGGLALNRSKLEAHAEEFAARLVANVP 420
            MKAAIL ESLTG+T KA ELIA NLQQEGW ITGV  VR+P+ AAIQDADIV++GTWVHGLFVVGQ PW L AI  LPA++GK AA +CTFALNP KTLD++ A ++ LGA+V+GGLALNR+KL  H EEFAARL AN+P
Sbjct:    4 MKAAILFESLTGNTRKAAELIATNLQQEGWGITGVCPVRRPEMAAIQDADIVIIGTWVHGLFVVGQQPWGLGAIGHLPAIKGKLAATYCTFALNPGKTLDRLDATVSYLGANVIGGLALNRAKLRDHTEEFAARLTANIP 143          
BLAST of mRNA_P-wetherbeei_contig10223.2.1 vs. uniprot
Match: A0A7W1LU08_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1LU08_9ACTN)

HSP 1 Score: 201 bits (511), Expect = 5.300e-64
Identity = 100/140 (71.43%), Postives = 116/140 (82.86%), Query Frame = 1
Query:    4 KAAILVESLTGHTWKAGELIAGNLQQEGWTITGVNRVRQPDFAAIQDADIVLVGTWVHGLFVVGQAPWALAAISQLPAMRGKRAAAFCTFALNPAKTLDKMTAAITGLGADVVGGLALNRSKLEAHAEEFAARLVANVPA 423
            KAAIL+ESLTG+TWKAGE +AG L QEGW+ITG+NR+R+PD AAIQDAD+VL+GTWVHG+FVVGQAPW LA +  LPAMR K+AA FCTFALNP  +L KMT A   LGADV+GGLAL+RSKL+ H E FA RLV   PA
Sbjct:    4 KAAILIESLTGNTWKAGEKVAGLLSQEGWSITGLNRMREPDHAAIQDADMVLLGTWVHGMFVVGQAPWGLATLRSLPAMRDKKAAVFCTFALNPGNSLQKMTRAAWTLGADVIGGLALSRSKLDEHCEIFAERLVVASPA 143          
BLAST of mRNA_P-wetherbeei_contig10223.2.1 vs. uniprot
Match: A0A7K0Y7W6_9ACTN (Flavodoxin-like domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7K0Y7W6_9ACTN)

HSP 1 Score: 199 bits (506), Expect = 2.960e-63
Identity = 99/141 (70.21%), Postives = 117/141 (82.98%), Query Frame = 1
Query:    1 MKAAILVESLTGHTWKAGELIAGNLQQEGWTITGVNRVRQPDFAAIQDADIVLVGTWVHGLFVVGQAPWALAAISQLPAMRGKRAAAFCTFALNPAKTLDKMTAAITGLGADVVGGLALNRSKLEAHAEEFAARLVANVPA 423
            MKAAIL+ESLTG+TWKAGELIA NLQQE W+ITG++ V+ PD A+IQ+AD ++VGTWVHGLFVVGQAPWA+  +  LPAM GK+A AFCTFALNP K+LD MT  +   GADVVGGLAL+R KL AH+EEFA RLV +V A
Sbjct:   10 MKAAILIESLTGNTWKAGELIAANLQQENWSITGLSAVKSPDHASIQEADTIIVGTWVHGLFVVGQAPWAIDRLRALPAMSGKKAVAFCTFALNPGKSLDVMTNTLLSRGADVVGGLALHRGKLAAHSEEFAIRLVDSVSA 150          
BLAST of mRNA_P-wetherbeei_contig10223.2.1 vs. uniprot
Match: A0A6I3A6K9_9ACTN (Flavodoxin-like domain-containing protein n=5 Tax=root TaxID=1 RepID=A0A6I3A6K9_9ACTN)

HSP 1 Score: 199 bits (505), Expect = 3.140e-63
Identity = 96/136 (70.59%), Postives = 115/136 (84.56%), Query Frame = 1
Query:    1 MKAAILVESLTGHTWKAGELIAGNLQQEGWTITGVNRVRQPDFAAIQDADIVLVGTWVHGLFVVGQAPWALAAISQLPAMRGKRAAAFCTFALNPAKTLDKMTAAITGLGADVVGGLALNRSKLEAHAEEFAARLV 408
            MKAA+LVESLTG+TWKA E+IA NLQQEGWTITG+N ++QPD  AIQ AD+++VGTWVHG F+VGQAPW +  I+ LPA+ GKRAA FCTFALNP KTL  M  ++T LGADV+GG+AL+RSKL AH EE+AARLV
Sbjct:    1 MKAALLVESLTGNTWKAAEMIAANLQQEGWTITGLNPMKQPDHHAIQAADLIVVGTWVHGAFIVGQAPWGIGNINALPAIAGKRAATFCTFALNPGKTLGAMEKSVTRLGADVIGGMALHRSKLAAHTEEYAARLV 136          
BLAST of mRNA_P-wetherbeei_contig10223.2.1 vs. uniprot
Match: A0A524B557_9ACTN (Flavodoxin-like domain-containing protein n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524B557_9ACTN)

HSP 1 Score: 197 bits (502), Expect = 8.980e-63
Identity = 91/136 (66.91%), Postives = 116/136 (85.29%), Query Frame = 1
Query:    1 MKAAILVESLTGHTWKAGELIAGNLQQEGWTITGVNRVRQPDFAAIQDADIVLVGTWVHGLFVVGQAPWALAAISQLPAMRGKRAAAFCTFALNPAKTLDKMTAAITGLGADVVGGLALNRSKLEAHAEEFAARLV 408
            MKAA+LVESLTG+TW+A E+IAGN+QQEGW ITG++ +R+PD A+IQ AD+VL+GTWVHG F++GQAPW + AI+ LP++ GK+A  FCTFALNP +TL  M  A+TGLGADV+GG+AL+RSKL  H EEFAARL+
Sbjct:    1 MKAALLVESLTGNTWRAAEMIAGNVQQEGWQITGLSPMRRPDHASIQSADVVLIGTWVHGAFIIGQAPWGIGAITALPSLAGKKAVTFCTFALNPGRTLGAMDKAVTGLGADVIGGMALHRSKLAGHTEEFAARLL 136          
BLAST of mRNA_P-wetherbeei_contig10223.2.1 vs. uniprot
Match: A0A6I3HP07_9ACTN (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A6I3HP07_9ACTN)

HSP 1 Score: 197 bits (501), Expect = 2.690e-62
Identity = 93/136 (68.38%), Postives = 116/136 (85.29%), Query Frame = 1
Query:    1 MKAAILVESLTGHTWKAGELIAGNLQQEGWTITGVNRVRQPDFAAIQDADIVLVGTWVHGLFVVGQAPWALAAISQLPAMRGKRAAAFCTFALNPAKTLDKMTAAITGLGADVVGGLALNRSKLEAHAEEFAARLV 408
            MK A+LVESLTG+TWKA ELIAGNLQQEGWTITG+N V++PD  A+Q AD+++VGTWVHG F+VGQ+PW +  I+ LPA+ GKRAA FCTFALNP KTL  M  ++  LGADV+GG+AL+R+K+EAH+EEFAARL+
Sbjct:   24 MKVALLVESLTGNTWKAAELIAGNLQQEGWTITGLNPVKKPDHLALQAADLIVVGTWVHGAFIVGQSPWGIGNINALPAITGKRAATFCTFALNPGKTLGAMEKSVNRLGADVIGGMALHRAKIEAHSEEFAARLM 159          
BLAST of mRNA_P-wetherbeei_contig10223.2.1 vs. uniprot
Match: A0A6I3HUR8_9ACTN (Flavodoxin-like domain-containing protein n=4 Tax=root TaxID=1 RepID=A0A6I3HUR8_9ACTN)

HSP 1 Score: 196 bits (498), Expect = 3.650e-62
Identity = 98/141 (69.50%), Postives = 115/141 (81.56%), Query Frame = 1
Query:    1 MKAAILVESLTGHTWKAGELIAGNLQQEGWTITGVNRVRQPDFAAIQDADIVLVGTWVHGLFVVGQAPWALAAISQLPAMRGKRAAAFCTFALNPAKTLDKMTAAITGLGADVVGGLALNRSKLEAHAEEFAARLVANVPA 423
            MKAAIL+ESLTG+TWKAGELIA NLQQE W+ITG++ ++ P+ A+IQDAD V+VGTWVHGLFVVGQAPWA+  +  LPAM GK+A AFCT+ALNP K+LD MT  +   GADVVGGLAL R  L  HAEEFA RLV +VPA
Sbjct:    1 MKAAILIESLTGNTWKAGELIAANLQQENWSITGISSMKDPNHASIQDADTVIVGTWVHGLFVVGQAPWAIDRLRHLPAMAGKQAVAFCTYALNPGKSLDVMTRELQMRGADVVGGLALQRGHLAEHAEEFAIRLVDSVPA 141          
BLAST of mRNA_P-wetherbeei_contig10223.2.1 vs. uniprot
Match: A0A7V9IIJ2_9ACTN (Flavodoxin-like domain-containing protein n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9IIJ2_9ACTN)

HSP 1 Score: 196 bits (497), Expect = 5.180e-62
Identity = 96/137 (70.07%), Postives = 114/137 (83.21%), Query Frame = 1
Query:    1 MKAAILVESLTGHTWKAGELIAGNLQQEGWTITGVNRVRQPDFAAIQDADIVLVGTWVHGLFVVGQAPWALAAISQLPAMRGKRAAAFCTFALNPAKTLDKMTAAITGLGADVVGGLALNRSKLEAHAEEFAARLVA 411
            MKAAILVESLTG+TWKA E++AG L QE W+ITG+ R+RQPD AAIQ+AD+VL+GTWVHG FVVGQAPW L+ I+ LP+MR K+AA FCTFAL+P K+LDKMT A + LG +V+GGLALNR KL  H E FA RLVA
Sbjct:    1 MKAAILVESLTGNTWKAAEMLAGKLSQEHWSITGLTRMRQPDHAAIQEADVVLIGTWVHGFFVVGQAPWGLSTIAALPSMRHKKAAVFCTFALDPGKSLDKMTRAASTLGVEVIGGLALNRGKLPEHTEIFAERLVA 137          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10223.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7K1B1U1_9ACTN2.590e-6772.14Uncharacterized protein n=2 Tax=root TaxID=1 RepID... [more]
A0A6I3WMS0_9ACTN3.400e-6572.34Flavodoxin-like domain-containing protein n=2 Tax=... [more]
A0A6I3F2V7_9ACTN4.360e-6472.14Flavodoxin-like domain-containing protein n=2 Tax=... [more]
A0A7W1LU08_9ACTN5.300e-6471.43Uncharacterized protein n=1 Tax=Acidimicrobiia bac... [more]
A0A7K0Y7W6_9ACTN2.960e-6370.21Flavodoxin-like domain-containing protein n=1 Tax=... [more]
A0A6I3A6K9_9ACTN3.140e-6370.59Flavodoxin-like domain-containing protein n=5 Tax=... [more]
A0A524B557_9ACTN8.980e-6366.91Flavodoxin-like domain-containing protein n=1 Tax=... [more]
A0A6I3HP07_9ACTN2.690e-6268.38Uncharacterized protein n=3 Tax=root TaxID=1 RepID... [more]
A0A6I3HUR8_9ACTN3.650e-6269.50Flavodoxin-like domain-containing protein n=4 Tax=... [more]
A0A7V9IIJ2_9ACTN5.180e-6270.07Flavodoxin-like domain-containing protein n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10223contigP-wetherbeei_contig10223:1108..1539 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1313172.YM304_36130
Preferred namefldA
PFAMsFlavodoxin_4
Model size432
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.74e-57
EggNOG OGsCOG0716@1|root,COG0716@2|Bacteria
DescriptionFMN binding
Cds size432
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185859.8517978-CDS-P-wetherbeei_contig10223:1107..15391683185859.8517978-CDS-P-wetherbeei_contig10223:1107..1539Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10223 1108..1539 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10223.2.1prot_P-wetherbeei_contig10223.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10223 1108..1539 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10223.2.1

>prot_P-wetherbeei_contig10223.2.1 ID=prot_P-wetherbeei_contig10223.2.1|Name=mRNA_P-wetherbeei_contig10223.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp
MKAAILVESLTGHTWKAGELIAGNLQQEGWTITGVNRVRQPDFAAIQDAD
IVLVGTWVHGLFVVGQAPWALAAISQLPAMRGKRAAAFCTFALNPAKTLD
KMTAAITGLGADVVGGLALNRSKLEAHAEEFAARLVANVPAHA*
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mRNA from alignment at P-wetherbeei_contig10223:1108..1539-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10223.2.1 ID=mRNA_P-wetherbeei_contig10223.2.1|Name=mRNA_P-wetherbeei_contig10223.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig10223:1108..1539- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGCAGCGATCCTGGTGGAGAGCCTGACGGGCCACACGTGGAAGGC CGGCGAGCTGATCGCCGGCAACCTCCAACAGGAGGGGTGGACGATCACCG GTGTGAACCGCGTGCGTCAGCCCGACTTCGCCGCCATCCAAGATGCCGAC ATCGTCCTCGTCGGCACGTGGGTGCACGGCCTGTTCGTGGTCGGTCAGGC GCCGTGGGCCCTTGCCGCGATCTCGCAGCTGCCGGCGATGCGCGGCAAGC GCGCCGCAGCGTTCTGCACGTTCGCCCTCAACCCGGCCAAGACGCTCGAC AAGATGACCGCAGCGATCACCGGCCTCGGCGCCGACGTCGTCGGCGGGCT GGCCCTGAACCGCAGCAAGCTCGAAGCGCACGCCGAGGAGTTCGCGGCCC GCCTCGTCGCGAACGTCCCCGCGCACGCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10223:1108..1539-

>mRNA_P-wetherbeei_contig10223.2.1 ID=mRNA_P-wetherbeei_contig10223.2.1|Name=mRNA_P-wetherbeei_contig10223.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig10223:1108..1539- (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGGCAGCGATCCTGGTGGAGAGCCTGACGGGCCACACGTGGAAGGC
CGGCGAGCTGATCGCCGGCAACCTCCAACAGGAGGGGTGGACGATCACCG
GTGTGAACCGCGTGCGTCAGCCCGACTTCGCCGCCATCCAAGATGCCGAC
ATCGTCCTCGTCGGCACGTGGGTGCACGGCCTGTTCGTGGTCGGTCAGGC
GCCGTGGGCCCTTGCCGCGATCTCGCAGCTGCCGGCGATGCGCGGCAAGC
GCGCCGCAGCGTTCTGCACGTTCGCCCTCAACCCGGCCAAGACGCTCGAC
AAGATGACCGCAGCGATCACCGGCCTCGGCGCCGACGTCGTCGGCGGGCT
GGCCCTGAACCGCAGCAAGCTCGAAGCGCACGCCGAGGAGTTCGCGGCCC
GCCTCGTCGCGAACGTCCCCGCGCACGCCTGA
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