mRNA_P-wetherbeei_contig1022.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1022.3.1 vs. uniprot
Match: A0A2V7YRA1_9BACT (Very short patch repair endonuclease n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7YRA1_9BACT) HSP 1 Score: 139 bits (350), Expect = 2.180e-39 Identity = 70/145 (48.28%), Postives = 96/145 (66.21%), Query Frame = 1 Query: 19 PSFIRLRAASRLTSKVARASSIKCNTRCELLLQRALRTHGLRYRLNARDLPGRPDIVFVPERIAVFCDGDFWHGRRLAARLRKLAKGHNGDYWVQKIRRNVERDRQQTRALKGLGWQVLRIWEGDVLANPTHQAKLVFDVIQEQR 453 P++ LR AS + AR SS K +TRCE+ L++ L G RYR N LPGRPD+VF ++AVF DGDFWHGR R KL++G+N YWV KI+RN+ERDRQ TR + +GW VLR WE +V ++P + V + ++E++ Sbjct: 3 PTYKGLRPASPHATAAARGSSKKTDTRCEVTLRKTLWAAGCRYRKNVPGLPGRPDVVFPGAKVAVFVDGDFWHGRDWETRQGKLSRGNNPAYWVAKIQRNIERDRQNTRHRQEMGWTVLRFWESEVHSDPGAVVRRVRETLRERQ 147
BLAST of mRNA_P-wetherbeei_contig1022.3.1 vs. uniprot
Match: A0A6M0K429_9GAMM (Very short patch repair endonuclease n=1 Tax=Thiorhodococcus minor TaxID=57489 RepID=A0A6M0K429_9GAMM) HSP 1 Score: 137 bits (344), Expect = 2.460e-38 Identity = 73/142 (51.41%), Postives = 94/142 (66.20%), Query Frame = 1 Query: 19 PSFIRLRAASRLTSKVARASSIKCNTRCELLLQRALRTHGLRYRLNARDLPGRPDIVFVPERIAVFCDGDFWHGRRLAARLRKLAKGHNGDYWVQKIRRNVERDRQQTRALKGLGWQVLRIWEGDVLANPTHQAKLVFDVIQ 444 P F L AS+ S V R + K + E LL++ L GLRYRL+A++LPG+PDIVF R+AVF DGDFWHGR R RKLA+GHN YWV+KIR N+ERDR+ T L+ GW+VLR+WE D+L +P + V + Q Sbjct: 8 PRFDALSPASKQASAVKRKNRAK-GSGAEALLRKRLWARGLRYRLHAKELPGKPDIVFRKLRLAVFVDGDFWHGRDWDQRQRKLAQGHNPGYWVEKIRYNLERDRRNTLELESRGWRVLRLWETDILKDPDGATEAVARLAQ 148
BLAST of mRNA_P-wetherbeei_contig1022.3.1 vs. uniprot
Match: A0A7W1MS55_9BACT (Very short patch repair endonuclease n=1 Tax=Chthoniobacterales bacterium TaxID=2201154 RepID=A0A7W1MS55_9BACT) HSP 1 Score: 135 bits (339), Expect = 2.380e-37 Identity = 70/129 (54.26%), Postives = 89/129 (68.99%), Query Frame = 1 Query: 19 PSFIRLRAASRLTSKVARASSIKCNTRCELLLQRALRTHGLRYRLNARDLPGRPDIVFVPERIAVFCDGDFWHGRRLAARLRKLAKGHNGDYWVQKIRRNVERDRQQTRALKGLGWQVLRIWEGDVLAN 405 PSF A+S S R+++ + NTR EL+L++AL G RYRL+AR + G+PDIVFV IAVFCDGDFWHGR R RKLA G N YWV KI+ NV RDR+ T AL+ GW+V+R+WE ++ AN Sbjct: 20 PSFKNFSASSDAASHTKRSNTAR-NTRHELILRKALTARGARYRLHARGVLGKPDIVFVGAAIAVFCDGDFWHGRNWTIRKRKLATGANSAYWVAKIQSNVLRDRRTTAALRKQGWEVVRVWETEIQAN 147
BLAST of mRNA_P-wetherbeei_contig1022.3.1 vs. uniprot
Match: A0A838QNU0_9BACT (Very short patch repair endonuclease n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=A0A838QNU0_9BACT) HSP 1 Score: 131 bits (329), Expect = 5.000e-36 Identity = 66/124 (53.23%), Postives = 82/124 (66.13%), Query Frame = 1 Query: 25 FIRLRAASRLTSKVARASSIKCNTRCELLLQRALRTHGLRYRLNARDLPGRPDIVFVPERIAVFCDGDFWHGRRLAARLRKLAKGHNGDYWVQKIRRNVERDRQQTRALKGLGWQVLRIWEGDV 396 F LR +S + AR +S K +T E++L+RAL GLRYR+ LPG+PD+VF R+ VFCDGDFWHGR LAAR+ KL +GHN YWV KI NV RDR+ AL GW V+R WE D+ Sbjct: 19 FAGLRPSSTRATSAARGASRKRDTLPEIVLRRALFARGLRYRVARDGLPGKPDVVFGRARVVVFCDGDFWHGRDLAARIAKLKRGHNAPYWVAKITGNVARDRRTDAALAADGWAVMRFWETDI 142
BLAST of mRNA_P-wetherbeei_contig1022.3.1 vs. uniprot
Match: UPI0019CF1A20 (Very short patch repair endonuclease n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=UPI0019CF1A20) HSP 1 Score: 125 bits (313), Expect = 1.470e-33 Identity = 64/137 (46.72%), Postives = 86/137 (62.77%), Query Frame = 1 Query: 19 PSFIRLRAASRLTSKVARASSIKCNTRCELLLQRALRTHGLRYRLNARDLPGRPDIVFVPERIAVFCDGDFWHGRRLAARLRKLAKGHNGDYWVQKIRRNVERDRQQTRALKGLGWQVLRIWEGDVLANPTHQAKLV 429 PSFI L+ AS L S A+ + +T E++L+R L GLRYR R LPG+PDIVF R+A+FCDGDFWHGR KL G N YW++KI+ N++RDR L+ GW V+R+WE D+ +P +A L+ Sbjct: 22 PSFIGLKPAS-LASSYAKQRNRGSDTAHEVMLRRELWHLGLRYRKTVRTLPGKPDIVFSRRRLAIFCDGDFWHGREWRKLRLKLKAGSNSSYWLKKIQSNIQRDRHNQTLLQCAGWTVIRLWESDIKRDPKKEAALI 157
BLAST of mRNA_P-wetherbeei_contig1022.3.1 vs. uniprot
Match: A0A3D1TUV7_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3D1TUV7_9CHLR) HSP 1 Score: 124 bits (312), Expect = 5.520e-33 Identity = 69/148 (46.62%), Postives = 88/148 (59.46%), Query Frame = 1 Query: 19 PSFIRLRAASRLTSKVARASSIKCNTRCELLLQRALRTHGLRYRLNARDLPGRPDIVFVPERIAVFCDGDFWHGRRLAARLRKLAKGHNGDYWVQKIRRNVERDRQQTRALKGLGWQVLRIWEGDVLANPTHQAKLVFDVIQEQRRKL 462 PSF L AS S+ RA+ K +T EL+L+R + GLRYR +A D+PG PD+VF R+AVFCDGDFWHGR KL +G N YW KI RN ERD L GW+VLR+WE D+ +P A V + E++R+L Sbjct: 42 PSFKGLVPASEAASRAKRANR-KRDTAVELVLRREIWRMGLRYRKHAADVPGTPDLVFPGLRVAVFCDGDFWHGRNWDTLRPKLEQGSNAAYWPGKIARNRERDLATNAKLAAAGWRVLRLWETDIRRHPQSAATTVLRFVDERKREL 188
BLAST of mRNA_P-wetherbeei_contig1022.3.1 vs. uniprot
Match: A0A8H9WS80_9BACT (Very short patch repair endonuclease n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A8H9WS80_9BACT) HSP 1 Score: 117 bits (294), Expect = 3.760e-31 Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = 1 Query: 91 NTRCELLLQRALRTHGLRYRLNARDLPGRPDIVFVPERIAVFCDGDFWHGRRLAARLRKLAKGHNGDYWVQKIRRNVERDRQQTRALKGLGWQVLRIWEGDVLAN 405 +T+ E+LL++AL GLR RL+A+DLPG+PDIVF + VFCDGDFWHGR R KLA G N DYW+ KI N ER Q++ L+ GW VLR WE ++LA+ Sbjct: 8 HTKPEILLRKALWARGLRCRLHAKDLPGKPDIVFRRAWVVVFCDGDFWHGRDWEQRRAKLADGANPDYWINKIASNRERAVHQSQELEAAGWLVLRFWESELLAD 112
BLAST of mRNA_P-wetherbeei_contig1022.3.1 vs. uniprot
Match: UPI001FACBE5A (very short patch repair endonuclease n=1 Tax=Sellimonas intestinalis TaxID=1653434 RepID=UPI001FACBE5A) HSP 1 Score: 117 bits (294), Expect = 9.180e-31 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 1 Query: 94 TRCELLLQRALRTHGLRYRLNARDLPGRPDIVFVPERIAVFCDGDFWHGRRLAAR----LRKLAKGHNGDYWVQKIRRNVERDRQQTRALKGLGWQVLRIWEGDV 396 TR E++L++AL LRYR+N + LPG+PDIVF +++AVFCDGDFWHG A R L + G++ DYW QKI RN+ERD + +AL+ LGW V+RIWE D+ Sbjct: 24 TRPEIILRKALWHKNLRYRVNYKKLPGKPDIVFTKQKVAVFCDGDFWHGHNWAIRGQSSLEEELDGYS-DYWRQKILRNIERDEENNKALRALGWTVVRIWESDI 127
BLAST of mRNA_P-wetherbeei_contig1022.3.1 vs. uniprot
Match: A0A373BHZ5_9FIRM (Very short patch repair endonuclease n=2 Tax=Eubacteriales TaxID=186802 RepID=A0A373BHZ5_9FIRM) HSP 1 Score: 116 bits (290), Expect = 2.270e-30 Identity = 60/130 (46.15%), Postives = 87/130 (66.92%), Query Frame = 1 Query: 76 SSIKC-NTRCELLLQRALRTHGLRYRLNARDLPGRPDIVFVPERIAVFCDGDFWHGRRLAAR----LRKLAKGHNGDYWVQKIRRNVERDRQQTRALKGLGWQVLRIWEGDVLANPTHQAKLVFDVIQEQ 450 S+IK +T+ ELLL++AL +G+RYR+N + LPG+PDIV +IA+FCDGDFWHG A R L + +G++ DYW KI +NVERD + T+ L +GW+V+RIWE D+ N K + + I ++ Sbjct: 2 SAIKSKDTKPELLLRKALWKYGIRYRVNYKKLPGKPDIVITKYKIAIFCDGDFWHGHNWAIRGKKSLEEELQGYS-DYWRNKIIKNVERDNKNTKLLYSMGWKVIRIWESDIEHNLDECVKTIKEAIFDE 130
BLAST of mRNA_P-wetherbeei_contig1022.3.1 vs. uniprot
Match: A0A173WTX8_ANAHA (Very short patch repair endonuclease n=3 Tax=Anaerostipes hadrus TaxID=649756 RepID=A0A173WTX8_ANAHA) HSP 1 Score: 115 bits (289), Expect = 4.660e-30 Identity = 51/117 (43.59%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 91 NTRCELLLQRALRTHGLRYRLNARDLPGRPDIVFVPERIAVFCDGDFWHGRRLAARLRKLAKGHNGDYWVQKIRRNVERDRQQTRALKGLGWQVLRIWEGDVLANPTHQAKLVFDVI 441 +T E+ L++AL + G RYR N ++LPGRPDIV +I +FCD +F+HG+ +KL KG N DYW++KI RN++RD+++ + LK +GW VL W D+L NP +++ + I Sbjct: 27 DTSIEVALRKALWSKGYRYRKNYKELPGRPDIVLTKYKIVIFCDSEFFHGKDWDTLKKKLEKGKNPDYWIKKIERNIQRDKEKDQVLKFMGWTVLHFWGKDILKNPDECIRVIEETI 143 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1022.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1022.3.1 >prot_P-wetherbeei_contig1022.3.1 ID=prot_P-wetherbeei_contig1022.3.1|Name=mRNA_P-wetherbeei_contig1022.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp STSGPTPSFIRLRAASRLTSKVARASSIKCNTRCELLLQRALRTHGLRYRback to top mRNA from alignment at P-wetherbeei_contig1022:1394..1861+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1022.3.1 ID=mRNA_P-wetherbeei_contig1022.3.1|Name=mRNA_P-wetherbeei_contig1022.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=468bp|location=Sequence derived from alignment at P-wetherbeei_contig1022:1394..1861+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1022:1394..1861+ >mRNA_P-wetherbeei_contig1022.3.1 ID=mRNA_P-wetherbeei_contig1022.3.1|Name=mRNA_P-wetherbeei_contig1022.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=468bp|location=Sequence derived from alignment at P-wetherbeei_contig1022:1394..1861+ (Phaeothamnion wetherbeei SAG_119_79)back to top |