mRNA_P-wetherbeei_contig10201.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10201.1.1
Unique NamemRNA_P-wetherbeei_contig10201.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10201.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10201contigP-wetherbeei_contig10201:1068..1472 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LQ17
Preferred nameKATNB1
PFAMsKatanin_con80,WD40
Model size405
Max annot lvl2759|Eukaryota
KEGG koko:K18643
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000226,GO:0000922,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005875,GO:0005886,GO:0006605,GO:0006810,GO:0006886,GO:0006996,GO:0007010,GO:0007017,GO:0007026,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008017,GO:0008092,GO:0008104,GO:0008150,GO:0008352,GO:0009987,GO:0010638,GO:0010639,GO:0010720,GO:0010941,GO:0010942,GO:0010975,GO:0010976,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0016020,GO:0016043,GO:0022008,GO:0030154,GO:0030424,GO:0030426,GO:0030427,GO:0030496,GO:0030901,GO:0031110,GO:0031111,GO:0031112,GO:0031114,GO:0031117,GO:0031344,GO:0031346,GO:0031461,GO:0032501,GO:0032502,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0033267,GO:0034613,GO:0036477,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043242,GO:0043243,GO:0043244,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044877,GO:0045184,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046907,GO:0046982,GO:0046983,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051013,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051493,GO:0051494,GO:0051495,GO:0051641,GO:0051649,GO:0051960,GO:0051962,GO:0060284,GO:0060322,GO:0065007,GO:0070507,GO:0070727,GO:0070840,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080008,GO:0097458,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:0120035,GO:0120038,GO:0150034,GO:1901879,GO:1901880,GO:1901881,GO:1902494,GO:1902903,GO:1902904,GO:1902905,GO:1990234,GO:2000026
Exons1
Evalue2.66e-07
EggNOG OGsKOG0267@1|root,KOG0267@2759|Eukaryota
Descriptionmicrotubule severing
Cds size405
COG categoryE
BRITEko00000,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185858.76177-CDS-P-wetherbeei_contig10201:1067..14721683185858.76177-CDS-P-wetherbeei_contig10201:1067..1472Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10201 1068..1472 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10201.1.1prot_P-wetherbeei_contig10201.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10201 1068..1472 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10201.1.1

>prot_P-wetherbeei_contig10201.1.1 ID=prot_P-wetherbeei_contig10201.1.1|Name=mRNA_P-wetherbeei_contig10201.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp
AADFLAAVRFEGDGVSLDTCAALLPLLEELLRLVDAPRAAAAALSSALYL
SRAFAPLVRDTLGLVGGGGIGGGGGGALGVDVAWEERRERCRRCHEGFAR
VQRVMSRAIYRDSRVQALAGEVERELNRYLWPER*
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mRNA from alignment at P-wetherbeei_contig10201:1068..1472-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10201.1.1 ID=mRNA_P-wetherbeei_contig10201.1.1|Name=mRNA_P-wetherbeei_contig10201.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig10201:1068..1472- (Phaeothamnion wetherbeei SAG_119_79)
GCCGCCGATTTTCTCGCGGCCGTCCGCTTCGAGGGCGACGGCGTCTCGCT
GGACACGTGCGCGGCGCTGCTGCCGCTGTTGGAAGAGCTGCTGCGGCTGG
TCGACGCGCCACGGGCCGCAGCGGCGGCGCTCTCCTCTGCGCTCTACCTC
AGCCGGGCCTTTGCGCCGCTTGTGCGCGATACGCTCGGCCTTGTCGGCGG
CGGTGGCATTGGTGGCGGTGGCGGTGGGGCTCTGGGCGTCGATGTGGCGT
GGGAGGAGCGGCGAGAGCGCTGCCGCCGCTGCCATGAGGGCTTTGCGCGG
GTCCAGCGAGTGATGAGCCGCGCAATCTACCGAGATTCGCGAGTGCAGGC
GTTAGCTGGAGAGGTGGAGAGGGAGTTGAACCGGTACCTCTGGCCTGAAC
GGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10201:1068..1472-

>mRNA_P-wetherbeei_contig10201.1.1 ID=mRNA_P-wetherbeei_contig10201.1.1|Name=mRNA_P-wetherbeei_contig10201.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig10201:1068..1472- (Phaeothamnion wetherbeei SAG_119_79)
GCCGCCGATTTTCTCGCGGCCGTCCGCTTCGAGGGCGACGGCGTCTCGCT
GGACACGTGCGCGGCGCTGCTGCCGCTGTTGGAAGAGCTGCTGCGGCTGG
TCGACGCGCCACGGGCCGCAGCGGCGGCGCTCTCCTCTGCGCTCTACCTC
AGCCGGGCCTTTGCGCCGCTTGTGCGCGATACGCTCGGCCTTGTCGGCGG
CGGTGGCATTGGTGGCGGTGGCGGTGGGGCTCTGGGCGTCGATGTGGCGT
GGGAGGAGCGGCGAGAGCGCTGCCGCCGCTGCCATGAGGGCTTTGCGCGG
GTCCAGCGAGTGATGAGCCGCGCAATCTACCGAGATTCGCGAGTGCAGGC
GTTAGCTGGAGAGGTGGAGAGGGAGTTGAACCGGTACCTCTGGCCTGAAC
GGTAA
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