mRNA_P-wetherbeei_contig10174.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10174.1.1
Unique NamemRNA_P-wetherbeei_contig10174.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10174.1.1 vs. uniprot
Match: A0A835ZCR5_9STRA (LMBR1-like membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCR5_9STRA)

HSP 1 Score: 281 bits (718), Expect = 4.570e-83
Identity = 158/331 (47.73%), Postives = 207/331 (62.54%), Query Frame = 2
Query:  560 LVKLHSRLRSSQEKVAATRQKWDTLLQRVDAVEVIVAGALPYPTVERGWFKVASGSSVSDNGSGXXXXXXXXXXXXXXXVVIXXXXXGVFGCISSCFLLVGARLVWYWRMHWGGWCQRGLAAVFGALSAMIVWSEIVIGLQDYVNLSPFGAVLRLMDGDDGLGAVHPLLLQSAALVPFLYMSICCYRSLFKLRLFSNMALQGPHQSLPGPLLVNAQYLIRLQFPLGYNFLQIVGYSGR--DGTAFQRLMSNMQVVPILGTGFQVYAPLAMVLLCVFTLCKGYARMLRFLGLEHEDLASEDDPDGKERLEEGRKLIDRSRRAAALREKRRAA 1546
            LV LHSRLR+ QEKV A RQ+W+ L+ +V  +E+IV+  LP P            S  +  GS                              ++   L  AR +W+WR+H      R  A +   LSAM++WSE+ +     V+LSPFG +++  +G        PLL+Q+AAL+PFLYMS+CCYRSLFKLRL S++AL GPHQSLPG L+ NAQYL+RLQFPLGYNFL ++ Y        AF +LMSNM VVP+LGT F +YAPL MV+LC+FT C GYAR+LR +G+EHEDL    D +G+ER++EG+ LI+R +R AALRE RR A
Sbjct:  256 LVSLHSRLRNGQEKVVAGRQRWEDLMNQVALLELIVSKQLPRPQ-----------SVTAGRGSNPLKR------------------------FATFVQLKSARALWFWRLHLEHRVLRLTAVLCFVLSAMVIWSEVALAAP--VDLSPFGKIIQSFEGKS------PLLIQAAALIPFLYMSLCCYRSLFKLRLLSSLALNGPHQSLPGQLMFNAQYLVRLQFPLGYNFLTLLHYEKGMLQHIAFNKLMSNMSVVPLLGTDFNIYAPLIMVVLCLFTACHGYARLLRMVGIEHEDLQCATDKEGQERMDEGKSLIERGKRQAALRESRRQA 543          
BLAST of mRNA_P-wetherbeei_contig10174.1.1 vs. uniprot
Match: A0A6H5JP79_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JP79_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 1.010e-74
Identity = 181/476 (38.03%), Postives = 246/476 (51.68%), Query Frame = 2
Query:  182 KVDMDLHDAICELDDAEHDVDRMEHIVERDLPHAPVERECMLINLIAVRATRDAFAVDTDRIRRTHTRGGSGXXXXXXXXGASSSGGNXXXXXXXVSNSSTPVRGSINGGGKWEGGD---------GHLRATQRCLVKLHSRLRSSQEKVAATRQKWDTLLQRVDAVEVIVAGALPYPTVERGWFKVASGSSVSDNGSGXXXXXXXXXXXXXXXVVIXXXXXGVFGCISSCFLLVGARLVWYWRMHWGGWCQRGLAAVFGALSAMIVWSEIVIGLQDYVNLSPFGAVLRLM-DGDDGLGAVHPLLLQSAALVPFLYMSICCYRSLFKLRLFSNMALQGPHQSLPGPLLVNAQYLIRLQFPLGYNFLQIVGYSGRDGT--------AFQRLMSNMQVVPILGTGFQVYAPLAMVLLCVFTLCKGYARMLRFLGLEHEDLASEDDPDGKERLEEGRKLIDRSRRAAALREKRRAARDA 1555
            +VD D HD++ EL+  E ++D ME  ++        +R  M   L + RAT +AF ++TD                                    S  +T  RG  NG  +W+ G          G  R + R   +LHS LR++Q  V A+R KW  LL+  D +  IV   +P+            G +V +                            V   + +     G R  W WR +      + LA +   LS +I+WSE++   +   NLSPFG +LRLM   + G+G  H L +Q+A LVPFLYMS+CCYRSLF LR+F   +LQG H +LPGPLL NAQYLIRLQFPLGYNF++++ Y G            AFQ+LM++M  VP+LGTGF VYAPL +V+LC FT  KGYAR+LR +GLEH DL S DDP G  R++EGR+L++R +R A +   RR  RDA
Sbjct:  201 QVDTDKHDSLFELETLERNLDSMERAMDIKKHWCIKDRAHMKNMLSSARATDEAFHLETD----------------------------------DGSFQTTRFRGK-NGSKRWDDGRTPEDALKDLGVSRLSPRDAARLHSSLRAAQVNVVASRMKWAALLKETDTLLCIVNNEIPW------------GDAVCET----------------------TPEESVCHFLRTVLRRTGNRAGWVWRAYLRALVCKALALLCAGLSGVILWSEVMAASR--WNLSPFGILLRLMYQQEAGIG--HALSMQAAVLVPFLYMSLCCYRSLFTLRIFGTFSLQGGHHTLPGPLLFNAQYLIRLQFPLGYNFMRMLRYYGTRSASVPALSLPAFQKLMNDMSTVPVLGTGFTVYAPLVLVVLCAFTYYKGYARVLRLVGLEHVDLVSMDDPGGNARVDEGRELVERGKRQAQVLAARR--RDA 601          
BLAST of mRNA_P-wetherbeei_contig10174.1.1 vs. uniprot
Match: A0A835Z6T2_9STRA (LMBR1-like membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6T2_9STRA)

HSP 1 Score: 219 bits (558), Expect = 8.490e-60
Identity = 131/300 (43.67%), Postives = 173/300 (57.67%), Query Frame = 2
Query:  560 LVKLHSRLRSSQEKVAATRQKWDTLLQRVDAVEVIVAGALPYPTVERGWFKVASGSSVSDNGSGXXXXXXXXXXXXXXXVVIXXXXXGVFGCISSCFLLVGARLVWYWRMHWGGWCQRGLAAVFGALSAMIVWSEIVIGLQDYVNLSPFGAVLRLMDGDDGLGAVHPLLLQSAALVPFLYMSICCYRSLFKLRLFSNMALQGPHQSLPGPLLVNAQYLIRLQFPLGYNFLQIVGYSGR--DGTAFQRLMSNMQVVPILGTGFQVYAPLAMVLLCVFTLCKGYARMLRFLGLEHEDLASED 1453
            L+KLHSRLR  QE+V A  Q+W  L+ +V  VE I++  LP P    G                                             S+     G+R+   W ++      R LA +  ALS M+VWSE  + +    +LSPFG ++ ++D     GA   L +Q+A LVPF+YMS C +RSLFKL+LF + AL GPHQSLP  L++NAQYL+RLQFPLGYNF+ ++G  G      AF +LMSNM VVP+LGT F +YAPL MVLLC+FT C+GYAR+LR +G+EHEDL + D
Sbjct:  326 LIKLHSRLREGQERVMAAWQRWQDLVDKVTCVEQIISRTLPEPQPLPG--------------------------------------------ASNYLRAQGSRVARVWLLYAHHHFLRLLAVICLALSVMVVWSECTLAVP--YDLSPFGWLIEVLDP---FGA---LAVQAAVLVPFIYMSFCTFRSLFKLKLFGSFALNGPHQSLPRQLIMNAQYLVRLQFPLGYNFVTLLGPEGGALQRIAFNKLMSNMAVVPLLGTDFNIYAPLLMVLLCLFTACRGYARLLRLVGIEHEDLHTAD 573          
BLAST of mRNA_P-wetherbeei_contig10174.1.1 vs. uniprot
Match: W7TPT9_9STRA (LMBR1-like membrane protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPT9_9STRA)

HSP 1 Score: 202 bits (514), Expect = 6.020e-53
Identity = 127/317 (40.06%), Postives = 171/317 (53.94%), Query Frame = 2
Query:  560 LVKLHSRLRSSQEKVAATRQKWDTLLQRVDAVEVIVAGALPYPTVERGWFKVASGSSVSDNGSGXXXXXXXXXXXXXXXVVIXXXXXGVFGCISSCFLLVGARLVWYWRMHWGGWCQRGLAAVFGALSAMIVWSEIVIGLQDYVNLSPFGAVLRLMDGDDGLGAVHPLLLQSAALVPFLYMSICCYRSLFKLRLFSNMALQGPHQSLPGPLLVNAQYLIRLQFPLGYNFLQIVGYSGRDGTAFQRLMSNMQVVPILGTGFQVYAPLAMVLLCVFTLCKGYARMLRFLGLEHEDLASEDDPDGKERLEEGRKLIDRSR 1510
            L  LH+RL+ +Q +V   +++ D ++ +V+ +E +  GALPYP+       V +G                                G    + +    +G  L WYW         R LA +   L+   +WS++ +G   Y  LSP+GA  +        G   P  +Q A  VP  Y+SIC YRSLFK +LF   +LQGPHQSL GPLLVNAQYLIRLQFPL YNFL ++       TAF+ LMSNM VVP+LG GF VYAPL MV+L  FT  +GYAR+LR +G  HEDL S ++ +  E +++GR L  R R
Sbjct:  340 LAGLHARLKKAQLRVQVLKKQRDAVISKVEVIEAVCQGALPYPS------DVKAGDGE-----------------------------GCCAALGAWASHLGTVLAWYWLTTLSHCTLRLLAILGWFLTVCFLWSQVFLG-SPYA-LSPYGAFQQ------AFGTSSPFAIQLAIAVPLAYVSICTYRSLFKFKLFGEFSLQGPHQSLAGPLLVNAQYLIRLQFPLAYNFLLMLRSPSSKQTAFRHLMSNMAVVPLLGRGFSVYAPLMMVVLAAFTYFRGYARLLRLVGAYHEDLISGEEQE--EMIQQGRSLARRRR 611          
BLAST of mRNA_P-wetherbeei_contig10174.1.1 vs. uniprot
Match: A0A7S2A7R7_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A7R7_TRICV)

HSP 1 Score: 179 bits (454), Expect = 1.200e-46
Identity = 128/348 (36.78%), Postives = 178/348 (51.15%), Query Frame = 2
Query:  530 DGHLRATQRCLVKLHSRLRSSQEKVAATRQKWDTLLQRVDAVEVIVAGALPYPTVERGWFKVASGSSVSDNGSGXXXXXXXXXXXXXXXVVIXXXXXGVFGCISSCFLLVGARLVWYWRMHWGGWCQRGLAAVFGALSAMIVWSEIVIGLQDYVNLSPFGAVLRLMDGDDGLGAVHPLLLQSAALVPFLYMSICCYRSLFKLRLFSNMALQGPHQSLPGPLLVNAQYLIRLQFPLGYNFLQIVGYSGRDGT-AFQRLMSNMQVVPILGTGFQVYAPLAMVLLCVFTLCKGYARMLRFLGLEHED---LASEDDPDGKERLEEGRKLIDRSRRAAALREKRRAARDAGG 1561
            DG +R +   L KL +RL+ +Q ++ ++ Q+W+ L++R      +  GA   P    G   + S + +                                   ++   ++G  + +YWR +      R L      LSAM++WSE  + +    NLSP+   L   DG  G G    +L Q AALVP LYMS C Y SLFKL +F    L+G  QS    L+ NAQYL+RLQFPLGYN+L ++ Y     T AF R+MS+M+ VP  GT F VYAPL ++ LC FTLC GYAR+L  LG+EHED   +   D  DGK  + EG +L+   RR A   E R  +  +GG
Sbjct:  111 DGDVRPSLDELAKLGARLKLAQAQLVSSEQRWNGLVERHQFYSELAEGATSPP----GRAAIVSTAPLLSQA-------------------------------NARLSVMGGYVRYYWRRYLRTPFYRFLGTSAAVLSAMVLWSEATLAIP--FNLSPYAGFLGATDGITGRG----VLFQIAALVPLLYMSACVYGSLFKLSIFGPFCLRGCRQSPGVALIFNAQYLVRLQFPLGYNYLMMLKYDTASTTCAFSRVMSHMETVPFFGTSFSVYAPLLILALCGFTLCNGYARLLSLLGMEHEDAILMGDRDTLDGK--VNEGIQLM---RRHAQRSEGRSGSGGSGG 412          
BLAST of mRNA_P-wetherbeei_contig10174.1.1 vs. uniprot
Match: A0A7S4VB21_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VB21_9STRA)

HSP 1 Score: 177 bits (449), Expect = 3.320e-44
Identity = 125/342 (36.55%), Postives = 174/342 (50.88%), Query Frame = 2
Query:  542 RATQRCLVKLHSRLRSSQEKVAATRQKWDTLLQRVDAVEVIVAGALPYPTVERGWFKVASGSSVSDNGSGXXXXXXXXXXXXXXXVVIXXXXXGVFGCISSCFLLVGARLVWYWRMHWGGWCQRGLAAVFGALSAMIVWSEIVIGLQDYVNLSPFGAVLRLMDGDDGLGAVHPLLLQSAALVPFLYMSICCYRSLFKLRLFSNMALQGPHQSLPGPLLVNAQYLIRLQFPLGYNFLQIVGYS-GRDGTAFQRLMSNMQVVPILGTGFQVYAPLAMVLLCVFTLCKGYARMLRFLGLEHED---LASEDDPDGKERLEEGRKLIDR-SRRAAALREKRRAARD 1552
            R T   LV LH+RL+ +QEKV   +Q+W+ ++++      +V G+ P              SS   NG                              ++   + +G ++   WR H      R +A     LS +I+W E  + ++   NLSPF   L L+DG +G       L Q AAL+P LYMS C Y SLFKL  F    L+G  QS    LL NAQYL+RLQFPLGYN+L +  Y       AF +LMS+M  VP+LGT F VYAPL ++ LC FTLC GY R++  LG+EHED   L+ ++  +GK  + EG  L+ +  RRA + R+  +   D
Sbjct:  315 RPTVDYLVHLHARLKLAQEKVIGAQQRWEVIVEQSRFYSNLVEGSTPQ-------------SSPGQNGGEDQQSSLPL--------------------MNEQLVPLGTKVQGMWRKHLRNPTYRLMALSTAGLSILILWCEATLAVE--YNLSPFNLFLDLLDGPNG--RQKGTLFQIAALIPLLYMSTCVYSSLFKLGTFGPYCLRGNRQSHGVALLFNAQYLVRLQFPLGYNYLLMTKYDISFTNCAFSQLMSHMDTVPVLGTSFSVYAPLLILALCGFTLCDGYPRLMAVLGVEHEDAILLSDKETLNGK--VNEGISLLRKYERRAGSSRQSTKTNND 617          
BLAST of mRNA_P-wetherbeei_contig10174.1.1 vs. uniprot
Match: A0A7S2VYF6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VYF6_9STRA)

HSP 1 Score: 164 bits (416), Expect = 2.220e-43
Identity = 93/175 (53.14%), Postives = 113/175 (64.57%), Query Frame = 2
Query:  920 AAVFGA-LSAMIVWSEIVIGLQDYVNLSPFGAVLRLMDGDDGLGAVHPLLLQSAALVPFLYMSICCYRSLFKLRLFSNMALQGPHQSLPGPLLVNAQYLIRLQFPLGYNFLQIVGYSGRDGT-AFQRLMSNMQVVPILGTGFQVYAPLAMVLLCVFTLCKGYARMLRFLGLEHED 1438
            AA + A LS  ++WSE  + L   +NLSPF   LRL +GDDG G    +L + AAL+P LYMS+C Y SL KL  F    L+G  QS    LL +AQYL+RLQFPLGYN+L ++ Y     T AF  LMSNM  VP LGT F VYAPL ++ LC FTLC GY R++  LG EHED
Sbjct:    8 AAFYAAFLSGAVLWSEATLSLS--MNLSPFALFLRLFNGDDGDG--KSILFKIAALIPLLYMSLCVYSSLIKLSGFGTFTLRGHRQSHGVALLFSAQYLVRLQFPLGYNYLLMLKYDTSSTTCAFSNLMSNMSTVPFLGTSFSVYAPLLILCLCGFTLCNGYPRLVALLGFEHED 178          
BLAST of mRNA_P-wetherbeei_contig10174.1.1 vs. uniprot
Match: A0A7R9Z808_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z808_9STRA)

HSP 1 Score: 154 bits (388), Expect = 2.370e-39
Identity = 93/188 (49.47%), Postives = 119/188 (63.30%), Query Frame = 2
Query:  953 VWSEIVIGLQDYVNLSPFGAVLRLMDGDDGLGAVHPLLLQSAALVPFLYMSICCYRSLFKLRLFSNMALQGPHQSLPGPLLVNAQYLIRLQFPLGYNFLQIVGYSGRDGT-AFQRLMSNMQVVPILGTGFQVYAPLAMVLLCVFTLCKGYARMLRFLGLEHED---LASEDDPDGKERLEEGRKLIDR 1504
            +WSE  +      +LSPF   L   D ++G G    +L Q AALVP LYMS C Y SLFKL +F    L+G  QSL   L+ NAQYL+RLQFPLGYN+L ++ Y     T AF R+MS+M+ VP  GT F VYAPL ++ LC FTLC GYAR+L  LG+EHED   +  ++  DGK  + EG +L+ R
Sbjct:    1 MWSEGTLAAP--ASLSPFRLFLSATDREEGRG----VLFQIAALVPLLYMSTCVYGSLFKLSVFGPFCLRGYKQSLGVALVFNAQYLVRLQFPLGYNYLLMLKYDTSSTTCAFSRVMSDMETVPFFGTSFSVYAPLLILALCGFTLCNGYARLLSLLGVEHEDAILMGDKETLDGK--VNEGIQLLRR 180          
BLAST of mRNA_P-wetherbeei_contig10174.1.1 vs. uniprot
Match: A0A7S2XKF6_9STRA (Hypothetical protein n=2 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XKF6_9STRA)

HSP 1 Score: 162 bits (409), Expect = 5.910e-39
Identity = 109/300 (36.33%), Postives = 150/300 (50.00%), Query Frame = 2
Query:  542 RATQRCLVKLHSRLRSSQEKVAATRQKWDTLLQRVDAVEVIVAGALPYPTVERGWFKVASGSSVSDNGSGXXXXXXXXXXXXXXXVVIXXXXXGVFGCISSCFLLVGARLVWYWRMHWGGWCQRGLAAVFGALSAMIVWSEIVIGLQDYVNLSPFGAVLRLMDGDDGLGAVHPLLLQSAALVPFLYMSICCYRSLFKLRLFSNMALQGPHQSLPGPLLVNAQYLIRLQFPLGYNFLQIVGY-SGRDGTAFQRLMSNMQVVPILGTGFQVYAPLAMVLLCVFTLCKGYARMLRFLGLEHED 1438
            R T + L +L+++L+ +Q  + +  Q+W++L++R      +  G +P  +  +     AS S    +GS                        GV GC+ S            W     G   R +A     LS  ++WSE  IGL   +NLSPF   L              +  Q AAL+P LYMS C Y SLFKL  F    L+G +QS+   L+ NAQYL+RLQFPLGYN+L ++ Y +     AF  +MS+M  VP  GT F VYAPL ++ LC FTLC GY R+L  LG+EHED
Sbjct:  300 RPTIQHLAELNAKLQRAQATLMSMEQRWNSLVKRSRFYASLAGGDVPDRSTSQ-----ASPSPSLLSGSNE----------------------GVGGCMRS-----------MWMRQLRGPVYRLMALSMAILSGTVLWSEATIGLD--INLSPFALFLEAFGSSS-----KNIFFQIAALIPLLYMSACVYSSLFKLSNFGPYCLRGHNQSIGVALVFNAQYLVRLQFPLGYNYLLMLKYDTSSTNCAFVHVMSDMSTVPFFGTSFSVYAPLMIIALCCFTLCNGYPRLLAVLGIEHED 554          
BLAST of mRNA_P-wetherbeei_contig10174.1.1 vs. uniprot
Match: A0A7S2V555_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V555_9STRA)

HSP 1 Score: 151 bits (381), Expect = 5.980e-39
Identity = 81/149 (54.36%), Postives = 109/149 (73.15%), Query Frame = 2
Query: 1079 ALVPFLYMSICCYRSLFKLRLFSNMALQGPHQSLPGPLLVNAQYLIRLQFPLGYNFLQIVGYSGRDGTAFQRLMSNMQVVPILGTGFQVYAPLAMVLLCVFTLCKGYARMLRFLGLEHEDL-----ASEDDPDGKERLEEGRKLIDRSR 1510
            ALVP LYMS+C YRSLFKL++ +  +LQ PHQS    LL NAQ +IRLQFPLGYNFL ++ YS    TA Q LM+NM VVPILGT F +YAP  ++LLC FTL +GY R+LR LGLE++ +     ++E + +  +++EEG++L+ R+R
Sbjct:    2 ALVPLLYMSVCMYRSLFKLKIIAQYSLQAPHQSQSVALLFNAQQMIRLQFPLGYNFLLMLKYS--RPTALQLLMNNMSVVPILGTSFSIYAPAILLLLCFFTLFQGYTRLLRLLGLEYDGMPPVTGSAEGEEESAQKVEEGQRLLRRAR 148          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10174.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCR5_9STRA4.570e-8347.73LMBR1-like membrane protein n=1 Tax=Tribonema minu... [more]
A0A6H5JP79_9PHAE1.010e-7438.03Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z6T2_9STRA8.490e-6043.67LMBR1-like membrane protein-domain-containing prot... [more]
W7TPT9_9STRA6.020e-5340.06LMBR1-like membrane protein n=3 Tax=Monodopsidacea... [more]
A0A7S2A7R7_TRICV1.200e-4636.78Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S4VB21_9STRA3.320e-4436.55Hypothetical protein n=6 Tax=Ditylum brightwellii ... [more]
A0A7S2VYF6_9STRA2.220e-4353.14Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7R9Z808_9STRA2.370e-3949.47Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2XKF6_9STRA5.910e-3936.33Hypothetical protein n=2 Tax=Attheya septentrional... [more]
A0A7S2V555_9STRA5.980e-3954.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10174contigP-wetherbeei_contig10174:2..2163 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FY43
Preferred nameLMBRD2
PFAMsLMBR1
Model size1859
Max annot lvl2759|Eukaryota
KEGG koko:K10393,ko:K16831
Hectar predicted targeting categoryother localisation
GOsGO:0001726,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005884,GO:0005886,GO:0006810,GO:0006897,GO:0006928,GO:0006935,GO:0008150,GO:0009605,GO:0009987,GO:0015629,GO:0016020,GO:0016043,GO:0016192,GO:0016477,GO:0030030,GO:0031252,GO:0031268,GO:0031941,GO:0032991,GO:0040011,GO:0042221,GO:0042330,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051234,GO:0051674,GO:0071840,GO:0071944,GO:0098657,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:0120036
Exons2
Evalue2.64e-74
EggNOG OGsKOG2296@1|root,KOG2296@2759|Eukaryota
DescriptionLMBR1-like membrane protein
Cds size1554
COG categoryJ
BRITEko00000,ko03036,ko04812
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185857.373177-UTR-P-wetherbeei_contig10174:1..1911683185857.373177-UTR-P-wetherbeei_contig10174:1..191Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10174 2..191 +
1683185857.402299-UTR-P-wetherbeei_contig10174:2048..21631683185857.402299-UTR-P-wetherbeei_contig10174:2048..2163Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10174 2049..2163 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185857.3841953-CDS-P-wetherbeei_contig10174:191..13431683185857.3841953-CDS-P-wetherbeei_contig10174:191..1343Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10174 192..1343 +
1683185857.3933902-CDS-P-wetherbeei_contig10174:1646..20481683185857.3933902-CDS-P-wetherbeei_contig10174:1646..2048Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10174 1647..2048 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10174.1.1prot_P-wetherbeei_contig10174.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10174 192..2048 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10174.1.1

>prot_P-wetherbeei_contig10174.1.1 ID=prot_P-wetherbeei_contig10174.1.1|Name=mRNA_P-wetherbeei_contig10174.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=518bp
MDLHDAICELDDAEHDVDRMEHIVERDLPHAPVERECMLINLIAVRATRD
AFAVDTDRIRRTHTRGGSGGSGGGAGGGASSSGGNGSGNGGGVSNSSTPV
RGSINGGGKWEGGDGHLRATQRCLVKLHSRLRSSQEKVAATRQKWDTLLQ
RVDAVEVIVAGALPYPTVERGWFKVASGSSVSDNGSGGGAGGSGGGSGNG
SGVVIGGGGGGVFGCISSCFLLVGARLVWYWRMHWGGWCQRGLAAVFGAL
SAMIVWSEIVIGLQDYVNLSPFGAVLRLMDGDDGLGAVHPLLLQSAALVP
FLYMSICCYRSLFKLRLFSNMALQGPHQSLPGPLLVNAQYLIRLQFPLGY
NFLQIVGYSGRDGTAFQRLMSNMQVVPILGTGFQVYAPLAMVLLCVFTLC
KGYARMLRFLGLEHEDLASEDDPDGKERLEEGRKLIDRSRRAAALREKRR
AARDAGGLGSGIGGGCGSGGLNGSGGGNGGTSSGDASPTNSGLKGYLAPS
VAAGTYGRLRTMDIEEV*
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mRNA from alignment at P-wetherbeei_contig10174:2..2163+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10174.1.1 ID=mRNA_P-wetherbeei_contig10174.1.1|Name=mRNA_P-wetherbeei_contig10174.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2162bp|location=Sequence derived from alignment at P-wetherbeei_contig10174:2..2163+ (Phaeothamnion wetherbeei SAG_119_79)
TAGCCTACAAACACCTTTTTTCTTTTTTATCCTTTGAGGTTGGAAGAACG CCTTTGGCAACTTTGTGCCAATCGGCTACACTTTCGAAACTGCACCCAAG TTCGCAATATCTCCGTTTCTTTTTCCCGATTCTCTTTTGTTGTAACTGCT TTCCTGGCAACCAACCGATCGGCCGACGTACAAGGTGGACATGGACCTGC ACGACGCCATCTGTGAGCTCGACGACGCGGAGCATGACGTCGACCGCATG GAGCACATCGTGGAGCGCGACCTCCCGCATGCCCCCGTCGAGCGCGAGTG CATGCTCATCAATTTGATTGCCGTCCGCGCCACCCGCGACGCCTTTGCTG TGGACACGGACCGGATCCGGCGGACGCACACGCGCGGCGGCAGCGGCGGC AGCGGCGGCGGCGCTGGCGGCGGTGCGAGCAGCAGCGGTGGGAATGGCAG CGGGAATGGCGGCGGGGTCAGCAACAGCAGCACGCCGGTGCGGGGGAGCA TCAACGGCGGCGGGAAATGGGAGGGCGGCGACGGCCACCTGCGGGCGACG CAGCGATGCCTGGTGAAGCTGCACTCGCGGCTGCGGAGCAGCCAGGAAAA AGTGGCGGCGACACGGCAGAAGTGGGACACGCTGTTGCAGCGCGTCGACG CCGTCGAAGTCATTGTGGCTGGGGCGCTACCCTACCCGACGGTGGAACGG GGCTGGTTCAAGGTCGCCAGTGGCAGCAGCGTCAGCGATAACGGCAGCGG CGGCGGAGCCGGCGGCTCGGGGGGAGGGAGCGGGAACGGGAGCGGCGTTG TCATTGGCGGCGGTGGTGGCGGCGTGTTTGGCTGCATCTCGTCGTGCTTC CTGCTGGTCGGGGCGCGGCTGGTGTGGTACTGGCGGATGCACTGGGGCGG CTGGTGCCAGCGGGGCCTGGCGGCGGTCTTCGGCGCGTTGAGCGCCATGA TTGTCTGGAGCGAAATCGTCATCGGCCTGCAAGACTACGTGAATCTCTCT CCGTTCGGGGCCGTCCTGCGGCTCATGGACGGCGACGACGGCCTGGGCGC AGTGCACCCGCTCCTGCTGCAGTCGGCGGCGCTGGTGCCATTCCTCTACA TGAGCATTTGTTGTTACCGGAGCCTCTTCAAGCTGCGTCTCTTTAGCAAC ATGGCGCTGCAAGGGCCGCACCAGAGCCTGCCTGGGCCGCTGCTGGTCAA CGCCCAGTACCTGATCCGGCTGCAGTTTCCGTTGGGTTACAACTTCCTGC AGATTGTCGGTTACAGCGGCCGTGACGGCACAGCCTTCCAACGCCTCATG AGCAACATGCAGGTTGTCCCCATCCTTGGGACGGGCTTTCAGGTCAGTCG GTAACGGCTTCGGTGCCGCTAAGGCTGCGAATGGAGATGGTGTGGCGGGT TGCCTTTGGCGTTCTTGGGGCGCAAGCTTTCTCTGGGCTTTGGATTGTGG GAGCCCCCTCCGCCGCTCATCTTTAACTCTCTGTCTACAGTGGCAGGCAG CTTGTTTTACCTTGCTATCGTTTAAAGCTGTTAGGCTCCCCGACAGGTAA TGTTTCTTCATATGTCTTTTTTCCCCTTTTTTTGGTGATTGCATGACCCC GGCCGGTTCTTTTCCGTTCAACACGTAATGGGTGGTCTGCCGCAGGTCTA CGCGCCGCTGGCCATGGTGCTTCTGTGCGTCTTCACCCTCTGCAAAGGTT ATGCCCGCATGCTGCGCTTTCTCGGGCTCGAGCACGAAGACTTGGCATCC GAGGACGACCCCGACGGCAAGGAGCGGCTGGAGGAAGGCCGGAAGCTCAT CGACCGCAGCCGCCGCGCCGCCGCGCTCCGGGAGAAGCGGCGGGCGGCGC GGGATGCCGGCGGCTTGGGCAGCGGGATCGGCGGCGGCTGCGGGAGCGGC GGCTTGAACGGCAGCGGGGGCGGGAACGGAGGGACCAGTAGCGGAGACGC CAGCCCGACGAACAGCGGGCTGAAGGGCTACCTGGCGCCGTCGGTGGCAG CGGGGACGTACGGCAGGCTGCGTACGATGGATATAGAAGAGGTTTGACTT GCGAGACAGTCGGAGAGTTTGTGGATGTTGGTTGTAGGGTGTTCATATGT GAATATAAACTACAAATTTCTTTTACCTGCTGGTATGATGGTTACCTGAA CCATGAGCTTGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10174:2..2163+

>mRNA_P-wetherbeei_contig10174.1.1 ID=mRNA_P-wetherbeei_contig10174.1.1|Name=mRNA_P-wetherbeei_contig10174.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1554bp|location=Sequence derived from alignment at P-wetherbeei_contig10174:2..2163+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACCTGCACGACGCCATCTGTGAGCTCGACGACGCGGAGCATGACGT
CGACCGCATGGAGCACATCGTGGAGCGCGACCTCCCGCATGCCCCCGTCG
AGCGCGAGTGCATGCTCATCAATTTGATTGCCGTCCGCGCCACCCGCGAC
GCCTTTGCTGTGGACACGGACCGGATCCGGCGGACGCACACGCGCGGCGG
CAGCGGCGGCAGCGGCGGCGGCGCTGGCGGCGGTGCGAGCAGCAGCGGTG
GGAATGGCAGCGGGAATGGCGGCGGGGTCAGCAACAGCAGCACGCCGGTG
CGGGGGAGCATCAACGGCGGCGGGAAATGGGAGGGCGGCGACGGCCACCT
GCGGGCGACGCAGCGATGCCTGGTGAAGCTGCACTCGCGGCTGCGGAGCA
GCCAGGAAAAAGTGGCGGCGACACGGCAGAAGTGGGACACGCTGTTGCAG
CGCGTCGACGCCGTCGAAGTCATTGTGGCTGGGGCGCTACCCTACCCGAC
GGTGGAACGGGGCTGGTTCAAGGTCGCCAGTGGCAGCAGCGTCAGCGATA
ACGGCAGCGGCGGCGGAGCCGGCGGCTCGGGGGGAGGGAGCGGGAACGGG
AGCGGCGTTGTCATTGGCGGCGGTGGTGGCGGCGTGTTTGGCTGCATCTC
GTCGTGCTTCCTGCTGGTCGGGGCGCGGCTGGTGTGGTACTGGCGGATGC
ACTGGGGCGGCTGGTGCCAGCGGGGCCTGGCGGCGGTCTTCGGCGCGTTG
AGCGCCATGATTGTCTGGAGCGAAATCGTCATCGGCCTGCAAGACTACGT
GAATCTCTCTCCGTTCGGGGCCGTCCTGCGGCTCATGGACGGCGACGACG
GCCTGGGCGCAGTGCACCCGCTCCTGCTGCAGTCGGCGGCGCTGGTGCCA
TTCCTCTACATGAGCATTTGTTGTTACCGGAGCCTCTTCAAGCTGCGTCT
CTTTAGCAACATGGCGCTGCAAGGGCCGCACCAGAGCCTGCCTGGGCCGC
TGCTGGTCAACGCCCAGTACCTGATCCGGCTGCAGTTTCCGTTGGGTTAC
AACTTCCTGCAGATTGTCGGTTACAGCGGCCGTGACGGCACAGCCTTCCA
ACGCCTCATGAGCAACATGCAGGTTGTCCCCATCCTTGGGACGGGCTTTC
AGGTCTACGCGCCGCTGGCCATGGTGCTTCTGTGCGTCTTCACCCTCTGC
AAAGGTTATGCCCGCATGCTGCGCTTTCTCGGGCTCGAGCACGAAGACTT
GGCATCCGAGGACGACCCCGACGGCAAGGAGCGGCTGGAGGAAGGCCGGA
AGCTCATCGACCGCAGCCGCCGCGCCGCCGCGCTCCGGGAGAAGCGGCGG
GCGGCGCGGGATGCCGGCGGCTTGGGCAGCGGGATCGGCGGCGGCTGCGG
GAGCGGCGGCTTGAACGGCAGCGGGGGCGGGAACGGAGGGACCAGTAGCG
GAGACGCCAGCCCGACGAACAGCGGGCTGAAGGGCTACCTGGCGCCGTCG
GTGGCAGCGGGGACGTACGGCAGGCTGCGTACGATGGATATAGAAGAGGT
TTGA
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