mRNA_P-wetherbeei_contig10170.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10170.1.1
Unique NamemRNA_P-wetherbeei_contig10170.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10170.1.1 vs. uniprot
Match: A0A5E4NC18_9HEMI (Knottin, scorpion toxin-like,Concanavalin A-like lectin/glucanase domain,Carbohydrate-binding WSC,Glycoside n=3 Tax=Cinara cedri TaxID=506608 RepID=A0A5E4NC18_9HEMI)

HSP 1 Score: 89.0 bits (219), Expect = 1.400e-17
Identity = 54/164 (32.93%), Postives = 84/164 (51.22%), Query Frame = 1
Query:   10 YMGCY----GDAAERDLAGAMVKMPAESASMEMCSAFCSALGFGFFGLQYGDECYC-DDKYGSYGEVSDAECSFPCTGDVTATCGGDWANSVFKVDGGAYGATDFS---YLGCFHNDENQPDLDGVSAFLPPDVAHPRRCAEFCDRAAYKYAAMEVRTVIFCEN 477
            Y+GCY    GD   R L G     P  + + E CS  C  +G+ +FG+ YG EC+C + K     +V D  C+  C+GD +  CGG W   ++       G TD++   YLGCF +++N+P    +S  +  + + P+RC   C+    KYA ++   V  C+N
Sbjct:  135 YLGCYSETPGDDENRLLKGPA--QPYNNNTPERCSEICFKMGYLYFGVTYGSECWCGNQKPSKLSKVEDTNCNSVCSGDSSQFCGGGWKIGIYST-----GITDYTPKKYLGCFEDNDNKPKGKYLSFQMDKNNS-PKRCINLCNTLQLKYAVLK-GNVCECKN 289          
BLAST of mRNA_P-wetherbeei_contig10170.1.1 vs. uniprot
Match: A0A2S2NWX5_SCHGA (Beta-1,3-glucan-binding protein 1 n=3 Tax=Aphidini TaxID=33387 RepID=A0A2S2NWX5_SCHGA)

HSP 1 Score: 88.2 bits (217), Expect = 2.590e-17
Identity = 55/164 (33.54%), Postives = 82/164 (50.00%), Query Frame = 1
Query:   10 YMGCYGDAAERDLAGAMVKMPAESASM---EMCSAFCSALGFGFFGLQYGDECYC-DDKYGSYGEVSDAECSFPCTGDVTATCGGDWANSVFKVDGGAYGATDF---SYLGCFHNDENQPDLDGVSAFLPPDVAH-PRRCAEFCDRAAYKYAAMEVRTVIFCEN 477
            Y+GCY +A   D    ++K PA   +    + CS  C  +GF FFG+ YG EC+C + +     +V D  C+ PCTGD    CGG W   ++       G TD+    Y+GCF +D  +    G     P D  + P+RC   C+   +KYAA++   +  C+N
Sbjct:  138 YLGCYAEAPNDD-ENRLLKGPAGPITYNTPQKCSVKCFNMGFLFFGVTYGTECWCGNQRPAKSSKVDDINCNTPCTGDSNQFCGGGWKMGIYST-----GLTDYIPNKYIGCFDDDGKK--TKGKYLTFPMDNNNSPKRCMNLCNTHRFKYAAIK-GNICECKN 292          
BLAST of mRNA_P-wetherbeei_contig10170.1.1 vs. uniprot
Match: UPI000A2A9987 (uncharacterized protein LOC110240642 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9987)

HSP 1 Score: 85.5 bits (210), Expect = 2.600e-17
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 1
Query:   97 CSAFCSALGFGFFGLQYGDECYCDDKYGSYGEVSDAECSFPCTGDVTATCGGDWANSVFKVDGGAYGATDFS-YLGCFHNDENQP-DLDGVSAFLPPDVAHPRRCAEFCDRAAYKYAAME 450
            C A CS LGF F GLQY   C C +KYG Y +  D +CS PC GD + TCGG W N+V+ +         ++ +LGC+   E+ P DL G+        A   RC + C  + Y YAA++
Sbjct:   15 CLARCSTLGFLFAGLQYRXGCACANKYGKYQKKPDGDCSLPCXGDSSLTCGGHWRNAVYCI------VPHYARFLGCYK--ESVPRDLWGLET-----TASTNRCLKICQSSGYAYAAVQ 121          
BLAST of mRNA_P-wetherbeei_contig10170.1.1 vs. uniprot
Match: A0A267F306_9PLAT (WSC domain-containing protein n=4 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267F306_9PLAT)

HSP 1 Score: 84.3 bits (207), Expect = 4.130e-17
Identity = 57/170 (33.53%), Postives = 79/170 (46.47%), Query Frame = 1
Query:    7 SYMGCYGD-AAERDL---------AGAMVKMPAESASMEM-----CSAFCSALGFGFFGLQYGDECYCDDKYGSYGEVSDAECSFPCTGDVTATCGGDWANSVFKVDGGAYGATDFSYLGCFHNDENQPDLDGVSAFLPPDVAHPRRCAEFCDRAAYKYAAMEVRTVIFC 471
            SY+GCY D  + RDL          G  V  P+ S  + M     CS+ CS   F +FG+QYGDECYC + +GS+G  S+A+CS  C G+    CGG   NSVF +   +Y  +D +         + P   G ++  P        C   C   A   AA+  R  + C
Sbjct:   29 SYLGCYKDNPSTRDLNGLSGVSKIGGFSVHQPSGSVYLSMMSHKLCSSICSIGSFSYFGVQYGDECYCGNSFGSHGLASEADCSMDCPGNAVQKCGGSNRNSVFSL---SYPVSDNNTYTVVKQ-SSPPVTSGATSVWPVAAQSVEDCLLRCSARADCRAAVFSRQELAC 194          
BLAST of mRNA_P-wetherbeei_contig10170.1.1 vs. uniprot
Match: UPI0007639862 (WSC domain-containing protein 2-like n=1 Tax=Diuraphis noxia TaxID=143948 RepID=UPI0007639862)

HSP 1 Score: 85.1 bits (209), Expect = 4.500e-17
Identity = 50/163 (30.67%), Postives = 82/163 (50.31%), Query Frame = 1
Query:   10 YMGCYGDAAERDLAGAMVKMPA---ESASMEMCSAFCSALGFGFFGLQYGDECYC-DDKYGSYGEVSDAECSFPCTGDVTATCGGDWANSVFKVDGGAYGATDF---SYLGCFHNDENQPDLDGVSAFLPPDVAHPRRCAEFCDRAAYKYAAMEVRTVIFCEN 477
            Y+GCY +    D    ++K PA    + + + CS  C  +G+ FFG+ YG EC+C + +     +V D  C  PC+GD    CGG W   ++       G TD+    Y+GCF +D  +     +S  +  + + P+RC   C+   +KYAA++   +  C+N
Sbjct:   11 YLGCYAET-PNDSENRLLKGPAGPYTNNTPQKCSEICFKMGYLFFGVSYGSECWCGNQRPAKSAKVEDINCDSPCSGDGKQFCGGGWKMGIYST-----GITDYVPKKYIGCFDDDGKKTKGKYLSFSMDTNNS-PKRCMNLCNTHRFKYAAVK-GNICECKN 165          
BLAST of mRNA_P-wetherbeei_contig10170.1.1 vs. uniprot
Match: A0A061H1S3_9BASI (Uncharacterized protein n=2 Tax=Pseudozyma flocculosa TaxID=84751 RepID=A0A061H1S3_9BASI)

HSP 1 Score: 87.4 bits (215), Expect = 4.630e-17
Identity = 54/171 (31.58%), Postives = 82/171 (47.95%), Query Frame = 1
Query:    1 GESYMGCYGDAAERDLAGAMVKMPAESASM------EMCSAFCSALGFGFFGLQYGDECYCDDKYGSYGEVSDAECSFPCTGDVTATCGGDWANSVFK------VDGGAYGATDFSYLGCFHNDENQPDLDGVSAFLPPDVAHPRRCAEFCDRAAYKYAAMEVRTVIFCEN 477
            G   +GC+ DAA    +G    M ++S S       E+C+ +C   GF F G QYG +C+C     +  +++D  CS PC+GD T TCGGDWANSV++      V   +  A +++  GC+ +  +     G S     D      CA  C +  + ++  E     FC N
Sbjct:  481 GGQSVGCFKDAAG---SGGERTMNSDSTSSDNGMTNEVCANYCGGKGFRFSGTQYGSQCFCSSIKPT--DIAD-NCSKPCSGDATETCGGDWANSVYENTLVGDVSASSALAANYNVAGCYVDSVSSRTFSGFS--FSDDAMTANMCASTCSQKGFAFSGTEYARECFCSN 643          
BLAST of mRNA_P-wetherbeei_contig10170.1.1 vs. uniprot
Match: A0A6G0TSY3_APHGL (Uncharacterized protein n=1 Tax=Aphis glycines TaxID=307491 RepID=A0A6G0TSY3_APHGL)

HSP 1 Score: 87.4 bits (215), Expect = 4.810e-17
Identity = 54/164 (32.93%), Postives = 81/164 (49.39%), Query Frame = 1
Query:   10 YMGCYGDAAERDLAGAMVKMPAESASM---EMCSAFCSALGFGFFGLQYGDECYC-DDKYGSYGEVSDAECSFPCTGDVTATCGGDWANSVFKVDGGAYGATDF---SYLGCFHNDENQPDLDGVSAFLPPDVAH-PRRCAEFCDRAAYKYAAMEVRTVIFCEN 477
            Y+GCY +    D    ++K PA   +    + CS  C  +GF FFG+ YG EC+C + +     +V D  C  PC+GD    CGG W   ++       G TD+    YLGCF +D  +    G     P D+ + P+RC   C+   +KYAA++   +  C+N
Sbjct:  132 YLGCYAETPNDD-ENRLLKGPAGPINYNTPQKCSEKCFNMGFLFFGVTYGSECWCGNQRPAKSSKVEDINCDSPCSGDSKQFCGGGWKMGIYST-----GITDYVPKKYLGCFDDDGKK--TKGKYLSFPMDINNSPKRCMNLCNTHRFKYAAVK-GNICECKN 286          
BLAST of mRNA_P-wetherbeei_contig10170.1.1 vs. uniprot
Match: A0A7V5V4X8_9DELT (WSC domain-containing protein (Fragment) n=1 Tax=Desulfobulbaceae bacterium TaxID=2053307 RepID=A0A7V5V4X8_9DELT)

HSP 1 Score: 87.0 bits (214), Expect = 5.360e-17
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 1
Query:    4 ESYMGCYGDAAERDLAGAMVKMPAESASMEMCSAFCSALGFGFFGLQYGDECYCDDKYGSYGEVSDAECSFPCTGDVTATCGGDWANSVFKV 279
            +SYMGC+ D   RDL G     P  + + E+C   C   GF + GLQY   C+C D YG  GE ++  C+ PC G+ +  CGGDWANS+++V
Sbjct:  129 QSYMGCFKDLKNRDLTGFSFHAP--NMTKELCMTTCQQKGFQYAGLQYSSYCFCGDSYGKSGEANN--CNMPCAGNKSEICGGDWANSLYRV 216          
BLAST of mRNA_P-wetherbeei_contig10170.1.1 vs. uniprot
Match: A0A8J1XKU0_OWEFU (Ofus.G03842 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XKU0_OWEFU)

HSP 1 Score: 83.6 bits (205), Expect = 8.770e-17
Identity = 54/170 (31.76%), Postives = 80/170 (47.06%), Query Frame = 1
Query:   10 YMGCYGDAAERDLAGAMVKMPAESASME-----MCSAFCSALGFGFFGLQYGDECYCDDKYGSYGEVSDAECSFPCTGDVTATCGGDWANSVFKVDGGAYGATDFSYLGCF----HNDENQ--PDLDGVSAFL---PPDVAHPRRCAEFCDRAAYKYAAMEVRTVIFCEN 477
            Y+GCY D    +       +   SA +      MC+  C  LG+ F G Q+  +C+C + +G YG+  ++ECS PC+GD T TCG    N V+ V           Y+GC+    H+D       ++GV+A +    PD+ + R     C    YKYA  +  T  FC N
Sbjct:   26 YIGCYKDGTHSNPRDLSYPVNGGSAFIRYMTPIMCNERCRNLGYKFAGSQHKTQCFCGNSFGRYGKAPESECSQPCSGDSTQTCGDGHRNRVYDVSD--------IYIGCYKDGMHSDPRDLMRPVNGVNARINDITPDICNNR-----CRDLGYKYAGSQFGTQCFCGN 182          
BLAST of mRNA_P-wetherbeei_contig10170.1.1 vs. uniprot
Match: A0A2H8TJU1_9HEMI (Beta-1,3-glucan-binding protein 1 n=4 Tax=Aphidini TaxID=33387 RepID=A0A2H8TJU1_9HEMI)

HSP 1 Score: 86.3 bits (212), Expect = 1.220e-16
Identity = 53/164 (32.32%), Postives = 81/164 (49.39%), Query Frame = 1
Query:   10 YMGCYGDAAERDLAGAMVKMPAESASM---EMCSAFCSALGFGFFGLQYGDECYC-DDKYGSYGEVSDAECSFPCTGDVTATCGGDWANSVFKVDGGAYGATDF---SYLGCFHNDENQPDLDGVSAFLPPDVAH-PRRCAEFCDRAAYKYAAMEVRTVIFCEN 477
            Y+GCY +    D    ++K PA   +    + CS  C  +GF FFG+ YG EC+C + +     +V D  C  PC+GD    CGG W   ++       G TD+    Y+GCF +D  +    G     P D+ + P+RC   C+   +KYAA++   +  C+N
Sbjct:  137 YLGCYAETPNDD-ENRLLKGPAGPITYNTPQKCSEKCFNMGFLFFGVTYGTECWCGNQRPAKSSKVEDINCDTPCSGDSKQFCGGGWKMGIYST-----GITDYIPKKYIGCFDDDGKK--TKGKYLSFPMDINNSPKRCMNLCNTHRFKYAAIK-GNICECKN 291          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10170.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5E4NC18_9HEMI1.400e-1732.93Knottin, scorpion toxin-like,Concanavalin A-like l... [more]
A0A2S2NWX5_SCHGA2.590e-1733.54Beta-1,3-glucan-binding protein 1 n=3 Tax=Aphidini... [more]
UPI000A2A99872.600e-1740.00uncharacterized protein LOC110240642 n=1 Tax=Exaip... [more]
A0A267F306_9PLAT4.130e-1733.53WSC domain-containing protein n=4 Tax=Macrostomum ... [more]
UPI00076398624.500e-1730.67WSC domain-containing protein 2-like n=1 Tax=Diura... [more]
A0A061H1S3_9BASI4.630e-1731.58Uncharacterized protein n=2 Tax=Pseudozyma floccul... [more]
A0A6G0TSY3_APHGL4.810e-1732.93Uncharacterized protein n=1 Tax=Aphis glycines Tax... [more]
A0A7V5V4X8_9DELT5.360e-1743.48WSC domain-containing protein (Fragment) n=1 Tax=D... [more]
A0A8J1XKU0_OWEFU8.770e-1731.76Ofus.G03842 protein n=1 Tax=Owenia fusiformis TaxI... [more]
A0A2H8TJU1_9HEMI1.220e-1632.32Beta-1,3-glucan-binding protein 1 n=4 Tax=Aphidini... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10170contigP-wetherbeei_contig10170:150..804 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog45351.EDO36331
PFAMsF5_F8_type_C,PAN_1,WSC,peroxidase
Model size480
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue3.83e-18
EggNOG OGsKOG4157@1|root,KOG4157@2759|Eukaryota
Descriptionprotein xylosyltransferase activity
Cds size468
COG categoryU
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185857.15839-CDS-P-wetherbeei_contig10170:149..4851683185857.15839-CDS-P-wetherbeei_contig10170:149..485Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10170 150..485 -
1683185857.1696475-CDS-P-wetherbeei_contig10170:660..7921683185857.1696475-CDS-P-wetherbeei_contig10170:660..792Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10170 661..792 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185857.1785953-UTR-P-wetherbeei_contig10170:792..8041683185857.1785953-UTR-P-wetherbeei_contig10170:792..804Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig10170 793..804 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10170.1.1prot_P-wetherbeei_contig10170.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10170 150..792 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10170.1.1

>prot_P-wetherbeei_contig10170.1.1 ID=prot_P-wetherbeei_contig10170.1.1|Name=mRNA_P-wetherbeei_contig10170.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=156bp
MGCYGDAAERDLAGAMVKMPAESASMEMCSAFCSALGFGFFGLQYGDECY
CDDKYGSYGEVSDAECSFPCTGDVTATCGGDWANSVFKVDGGAYGATDFS
YLGCFHNDENQPDLDGVSAFLPPDVAHPRRCAEFCDRAAYKYAAMEVRTV
IFCENA
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mRNA from alignment at P-wetherbeei_contig10170:150..804-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10170.1.1 ID=mRNA_P-wetherbeei_contig10170.1.1|Name=mRNA_P-wetherbeei_contig10170.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=655bp|location=Sequence derived from alignment at P-wetherbeei_contig10170:150..804- (Phaeothamnion wetherbeei SAG_119_79)
GGTGAAAGCTATATGGGGTGTTACGGCGACGCGGCGGAGCGGGATCTGGC GGGGGCGATGGTCAAAATGCCGGCGGAATCAGCGTCGATGGAGATGTGTT CAGCGTTCTGCAGCGCTCTCGGTTTCGGCTTCTTCGGGCTTCAGGTGAGA CGCAGAAAGCGAGTAGCGGTCCTCTCAGCCGTGCGGATGCGATGGGGAAG TGAGTGCTGTAGCTGCCGCTCAGGCAACGGCACGTCCACTTTGCGTCGTC TAACTGCTATTCCTGCCGTCCGCCCCGCTCCCTGCCCGGGATCAACTGCA TCTCTTTCCCGACCGGCAGTACGGAGACGAGTGTTATTGCGACGACAAGT ACGGCTCCTACGGCGAAGTATCCGACGCCGAGTGCAGCTTTCCCTGCACC GGTGACGTCACTGCCACCTGCGGTGGCGACTGGGCCAACTCCGTCTTCAA GGTCGACGGCGGCGCCTACGGTGCGACCGACTTCAGCTACCTCGGCTGCT TTCACAACGATGAGAACCAGCCGGACCTCGACGGCGTGTCGGCGTTCCTG CCGCCCGACGTGGCGCACCCGCGGCGCTGCGCCGAGTTCTGTGACCGCGC GGCCTACAAGTACGCCGCTATGGAGGTGAGAACCGTTATTTTTTGTGAGA ACGCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10170:150..804-

>mRNA_P-wetherbeei_contig10170.1.1 ID=mRNA_P-wetherbeei_contig10170.1.1|Name=mRNA_P-wetherbeei_contig10170.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=468bp|location=Sequence derived from alignment at P-wetherbeei_contig10170:150..804- (Phaeothamnion wetherbeei SAG_119_79)
ATGGGGTGTTACGGCGACGCGGCGGAGCGGGATCTGGCGGGGGCGATGGT
CAAAATGCCGGCGGAATCAGCGTCGATGGAGATGTGTTCAGCGTTCTGCA
GCGCTCTCGGTTTCGGCTTCTTCGGGCTTCAGTACGGAGACGAGTGTTAT
TGCGACGACAAGTACGGCTCCTACGGCGAAGTATCCGACGCCGAGTGCAG
CTTTCCCTGCACCGGTGACGTCACTGCCACCTGCGGTGGCGACTGGGCCA
ACTCCGTCTTCAAGGTCGACGGCGGCGCCTACGGTGCGACCGACTTCAGC
TACCTCGGCTGCTTTCACAACGATGAGAACCAGCCGGACCTCGACGGCGT
GTCGGCGTTCCTGCCGCCCGACGTGGCGCACCCGCGGCGCTGCGCCGAGT
TCTGTGACCGCGCGGCCTACAAGTACGCCGCTATGGAGGTGAGAACCGTT
ATTTTTTGTGAGAACGCT
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