mRNA_P-wetherbeei_contig10155.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig10155.1.1 vs. uniprot
Match: D8LGN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGN1_ECTSI) HSP 1 Score: 129 bits (323), Expect = 1.130e-32 Identity = 72/171 (42.11%), Postives = 96/171 (56.14%), Query Frame = 1 Query: 1 LWLLVSIAAYAFGVGGFVYCIIRQPRTHSYVQNPDPAAPPNAPPLLVLFSQGSRDQNWYEGAIIAPLYLVMSGALALAARAPTWRRAPFFVRGTAALAAATLFVYAFSLFMELYQLKTKYYRLWGEGESGVMPAFLAEPFSGPVKKSHGGAKRAARLLTLWLNDYTTFASF 513 LW VS+ Y GVGG +YCIIR P+TH Y Q+ A + S G RDQ WYEG ++A LYL MS A+ A +W+R P +R A LA T+ Y S++M LY KT +Y L ++P ++E GP+K+ HG +R RL LWL+DYT F +F Sbjct: 195 LWFTVSLGCYMTGVGGMIYCIIRNPKTHGYHQDGATA----------MMSAGGRDQFWYEGMVVAVLYLFMSAAILGVYYAASWKRVPSPLRTAAVLACITVLCYVVSVYMALYAKKTPWYNL-----KEMIPPVISEFHKGPLKRKHGLLRRLVRLSYLWLDDYTGFWTF 350
BLAST of mRNA_P-wetherbeei_contig10155.1.1 vs. uniprot
Match: A0A6H5L4U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U4_9PHAE) HSP 1 Score: 129 bits (324), Expect = 1.530e-32 Identity = 72/171 (42.11%), Postives = 97/171 (56.73%), Query Frame = 1 Query: 1 LWLLVSIAAYAFGVGGFVYCIIRQPRTHSYVQNPDPAAPPNAPPLLVLFSQGSRDQNWYEGAIIAPLYLVMSGALALAARAPTWRRAPFFVRGTAALAAATLFVYAFSLFMELYQLKTKYYRLWGEGESGVMPAFLAEPFSGPVKKSHGGAKRAARLLTLWLNDYTTFASF 513 LW VS+ Y GVGG +YCIIR P+TH Y Q+ A + S G RDQ WYEG +++ LYL MS A+ A +W+R P+ +R A LA T+ Y SL+M LY KT +Y L ++P ++E GP+K+ HG +R RL LWL+DYT F +F Sbjct: 234 LWFAVSMGCYMTGVGGMIYCIIRNPKTHGYHQDGATA----------MMSPGGRDQFWYEGMVVSVLYLFMSAAILGVYYAASWKRVPYPLRTAAVLACITVLCYVASLYMALYAKKTPWYTL-----KEMIPPVVSEFHKGPLKRKHGLLRRLVRLSYLWLDDYTGFWTF 389
BLAST of mRNA_P-wetherbeei_contig10155.1.1 vs. uniprot
Match: A0A836CKN7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN7_9STRA) HSP 1 Score: 105 bits (261), Expect = 8.330e-24 Identity = 66/172 (38.37%), Postives = 93/172 (54.07%), Query Frame = 1 Query: 1 LWLLVSIAAYAFGVGGFVYCIIRQPRTHSYVQNPDPAAPPNAPPLLVLFSQGSRDQNWYEGAIIAPLYLVMSGALALAARAPTWRRAPFFVRGTAALAAATLFVYAFSLFMELYQLKTKYYRLWGEGESGVMPAFLAEPFS-GPVKKSHGGAKRAARLLTLWLNDYTTFASF 513 LWL+VS+A Y GVGG +YCIIR P+ + P + +VLFS +RDQ W+EG ++A LYL+M+GA A WRRA +R A + V+ F+ LY LK+ +Y + + ++PA LA S G ++KS G R RL +WLN Y +F Sbjct: 166 LWLMVSLATYTVGVGGLIYCIIRNPQEYGT----KPTGINSTGHKVVLFSTNARDQWWWEGIVVAFLYLLMAGATWGITSAVQWRRAHPLLRNLAVCCCIAVLVHCIREFLALYILKSPWYNFSSQVQ--MLPAPLAALLSTGTIRKSSGIGFRVVRLSAIWLNQYPGLKAF 331
BLAST of mRNA_P-wetherbeei_contig10155.1.1 vs. uniprot
Match: A0A7S3YA15_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YA15_HETAK) HSP 1 Score: 67.4 bits (163), Expect = 5.280e-10 Identity = 62/174 (35.63%), Postives = 78/174 (44.83%), Query Frame = 1 Query: 1 LWLLVSIAAYAFGVGGFVYCIIRQPRTH-SYVQNPDPAAPPNAPPLLVLFSQGSRDQNWYEG------AIIAPLYLVMSGALALAAR--APTWRRAPFFVRGTAALAAATLFVYAFSLFMELYQLKTKYYRLWGEGESGVMPAFLAEPFSGPVKKSHGGAKRAARLLTLWLNDY 495 LWL VS+A YAFGV G VYC+IR P + S N D L L S G RDQ YEG A+ A L L A+A+ R A W R AA + +Y+ LY KT++Y L +P + + VKK G AKR RL +L +Y Sbjct: 238 LWLGVSLACYAFGVSGSVYCVIRNPPKYISQGVNFD---------RLELVSGGGRDQYVYEGLLVGAAAVAAGLALAAFAAVAVPPRGGAKRW----LVPRAVAAAVCLAVAIYSAQFLYTLYVKKTRWYSL-----GNTLPEGVKKWLGDSVKKGSGWAKRLLRLSEYFLFEY 393 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10155.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig10155.1.1 >prot_P-wetherbeei_contig10155.1.1 ID=prot_P-wetherbeei_contig10155.1.1|Name=mRNA_P-wetherbeei_contig10155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=172bp LWLLVSIAAYAFGVGGFVYCIIRQPRTHSYVQNPDPAAPPNAPPLLVLFSback to top mRNA from alignment at P-wetherbeei_contig10155:1508..2023- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig10155.1.1 ID=mRNA_P-wetherbeei_contig10155.1.1|Name=mRNA_P-wetherbeei_contig10155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig10155:1508..2023- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig10155:1508..2023- >mRNA_P-wetherbeei_contig10155.1.1 ID=mRNA_P-wetherbeei_contig10155.1.1|Name=mRNA_P-wetherbeei_contig10155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=516bp|location=Sequence derived from alignment at P-wetherbeei_contig10155:1508..2023- (Phaeothamnion wetherbeei SAG_119_79)back to top |