mRNA_P-wetherbeei_contig10128.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10128.1.2
Unique NamemRNA_P-wetherbeei_contig10128.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10128.1.2 vs. uniprot
Match: A0A835YQN7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQN7_9STRA)

HSP 1 Score: 327 bits (838), Expect = 6.990e-98
Identity = 187/369 (50.68%), Postives = 228/369 (61.79%), Query Frame = 1
Query:    1 VDLTGNWALLGSRKGLVLVDLTSPYQPAHTLAHQSRVDVGVVRWNPHYSHRGQAVSASNTNVLVWSVEDEGRPLLTTLRKHTRAVTDLSWSPLHPSVLATSSIDSSVLLWDTRAPHAPIQTFRAPHHGAQQVEWNRVNHALLASAHEKDIRVWDVRKASGD-------------------GXXXXXXXXXXXTAHTQEITGLDWSYASESLLATCSNDKTVKLWDVATAGNSGGA-------------IMQRANPLQRVLFAPFGQAVITTSRGIGEQVGS-----VWEKEAAGGRAIGGSPFSKMCSGSASMSRPPYWFVHVHSFEGPRGEVVGAAFRVVGDSLFQIVSLDRLQHLRLHRIRPSYLRA 996
            V+ +G +A+LGSRK LVLVDL SP+QPA TL + SR DVG VR N H S      S SN N L+W+VED+ RPL+ TLR+H R VTD++WSPLHP+VLAT S+DS V LWDTRAP  P+QTFR PHHGAQ VEWNRVN +LLASAHEK + +WD R+A GD                    XXXXX      TAHTQ+ITGLDWS++S + L T S D+TVKLW     G  GGA             I+QR  P+Q  LFAPFGQ V+TTSRGIGEQ+ +     +W                       S++     FV VH+FEGP   ++G  +RVV   LFQ+VSLDR  HLRLH++   +LRA
Sbjct:   28 VEPSGGFAVLGSRKSLVLVDLESPHQPAQTLYYTSRWDVGTVRINRHTSCI--LASTSNLNTLIWNVEDDARPLVATLRRHRRPVTDVAWSPLHPAVLATCSVDSCVHLWDTRAPADPVQTFRVPHHGAQAVEWNRVNFSLLASAHEKQLCIWDTRRAGGDLGXXXXXXXXXXXXXXXXXXXXXXXTAVSMFTAHTQQITGLDWSHSSAAHLVTASTDRTVKLWTTGAEGAGGGAXXAAPGGMATALAILQREQPMQTALFAPFGQGVVTTSRGIGEQIDAPQTIRLW-----------------------SLANLEDGFVAVHAFEGPSTRILGTCWRVVDGHLFQLVSLDRGGHLRLHKLSTQHLRA 371          
BLAST of mRNA_P-wetherbeei_contig10128.1.2 vs. uniprot
Match: A0A662XA48_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XA48_9STRA)

HSP 1 Score: 228 bits (580), Expect = 2.230e-63
Identity = 143/379 (37.73%), Postives = 193/379 (50.92%), Query Frame = 1
Query:    1 VDLTGNWALLGSRKGLVLVDLTSPYQPAHTLAHQSRVDVGVVRWNPHYSHRGQAVSASNTNVLVW-------------------------------------------SVEDEGRPLLTTLRKHTRAVTDLSWSPLHPSVLATSSIDSSVLLWDTRAPHAPIQTFRAPHHGAQQVEWNRVNHALLASAHEKDIRVWDVRKASGDGXXXXXXXXXXXTAHTQEITGLDWSYASESLLATCSNDKTVKLWDVATAGNSGGAIMQRANPLQRVLFAPFGQAVITTSRGIGEQVGSVWEKEAAGGRAIGGSPFSKMCSGSASMSRPPYWFVHVHSFEGPRGEVVGAAFRVVGDS-LFQIVSLDRLQHLRLHRIRPSYLRACGH 1005
            VD TG++A+L  RKGL LVDL SP+QP  TL HQ++++V VV+ NPH   +G   S+SN N L+W                                           S++   +PL+ TLR HTR V+D++WSP+ PS+LAT S D+  LLWD R+P  P+QT  A +    QVEWNRV+   LA+AH+ ++RVWD+R A               TAH Q+I GLDW       L TCS DKTVK WDV     S G +   A P+ R  + PFG  ++T S+ +   +  +W      G   G        SG+ S S      VH  SF G    V G A+RV   + ++Q+VS  + Q LRL R+    L ACG+
Sbjct:   91 VDATGSFAVLAGRKGLHLVDLESPFQPPATLHHQTKLEVSVVKCNPHALFKGHVASSSNRNTLIWDIANVSVATGGATSIGGGQGSSRGYKHGQHNGLGSSNGTNGNGSIQTTTQPLVATLRAHTRPVSDVAWSPMEPSLLATCSADAKTLLWDLRSPQRPVQTLNAFNSSVVQVEWNRVDATSLATAHDGEVRVWDLRAAGEKAVAPAALI----TAHMQKIYGLDWHPQRMYELLTCSEDKTVKFWDVTQPRVSQGTLTTGA-PVWRAQYTPFGDGLVTISQRMDNTL-RLWALSHGDGNGNGXXXXXXDASGANSASSVTAELVH--SFVGHDDLVKGMAWRVRPQTGMYQLVSWSKDQELRLWRVDAPQLEACGY 461          
BLAST of mRNA_P-wetherbeei_contig10128.1.2 vs. uniprot
Match: A0A0P1AAU5_PLAHL (Conserved WD40 repeat-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AAU5_PLAHL)

HSP 1 Score: 224 bits (571), Expect = 3.560e-62
Identity = 138/368 (37.50%), Postives = 195/368 (52.99%), Query Frame = 1
Query:    1 VDLTGNWALLGSRKGLVLVDLTSPYQPAHTLAHQSRVDVGVVRWNPHYSHRGQAVSASNTNVLVWSVEDEG--------------------------------RPLLTTLRKHTRAVTDLSWSPLHPSVLATSSIDSSVLLWDTRAPHAPIQTFRAPHHGAQQVEWNRVNHALLASAHEKDIRVWDVRKASGDGXXXXXXXXXXXTAHTQEITGLDWSYASESLLATCSNDKTVKLWDVATAGNSGGAIMQRANPLQRVLFAPFGQAVITTSRGIGEQVGSVWEKEAAGGRAIGGSPFSKMCSGSASMSRPPYWFVHVHSFEGPRGEVVGAAFRVVGDS-LFQIVSLDRLQHLRLHRIRPSYLRACGH 1005
            VD TG  A+L  RKGL LVDL +P+ P  TL HQ++++V VV+ NPH   +    S+SN N L+W + + G                                +PL+ TLR HTR V+D++WSP+ PS+LATSS D+  LLWD R+P  P+QT  A +    Q+EWNRV+   LA+AH+ ++RVWD+R ASG+            TAH Q I GLDW+      L TCS DKTVK WD+       G +   A P+ R  + PFG+ ++T S+ +   +  +W      G++ G    +   + ++S S        VHSF G    + G A+RV   S +FQ+VS  + Q LRL  +    L ACG+
Sbjct:   72 VDATGAVAVLAGRKGLHLVDLDTPFLPPSTLYHQTKLEVTVVKCNPHALFKSHVASSSNRNTLIWDIANAGVNANSSSSVGLYQGSSGTQKHDQEVGGSQTSTQPLVATLRGHTRPVSDIAWSPMEPSLLATSSADAKTLLWDMRSPQRPVQTLNASNISVIQMEWNRVDATTLATAHDGEVRVWDLR-ASGE---RTVAPVALITAHMQNIYGLDWNPQRMYELVTCSEDKTVKFWDITQPRVCQGMLTTGA-PVWRAQYTPFGEGLVTISQRLDNTI-RLWALSHGPGKS-GNHEETSSLNNTSSNSGATVTADLVHSFVGHNALIRGMAWRVRPQSNVFQLVSWSKDQELRLWHVDVPQLEACGY 432          
BLAST of mRNA_P-wetherbeei_contig10128.1.2 vs. uniprot
Match: D0NC10_PHYIT (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=D0NC10_PHYIT)

HSP 1 Score: 221 bits (564), Expect = 3.080e-61
Identity = 143/380 (37.63%), Postives = 198/380 (52.11%), Query Frame = 1
Query:    1 VDLTGNWALLGSRKGLVLVDLTSPYQPAHTLAHQSRVDVGVVRWNPHYSHRGQAVSASNTNVLVWSVED----------------------EGR-----------------PLLTTLRKHTRAVTDLSWSPLHPSVLATSSIDSSVLLWDTRAPHAPIQTFRAPHHGAQQVEWNRVNHALLASAHEKDIRVWDVRKASGDGXXXXXXXXXXXTAHTQEITGLDWSYASESLLATCSNDKTVKLWDVATAGNSGGAIMQRANPLQRVLFAPFGQAVITTSRGIGEQVGSVW-----EKEAAGGRAIGGSPFSKMCSGSASMSRPPYWFVHVHSFEGPRGEVVGAAFRVVGD-SLFQIVSLDRLQHLRLHRIRPSYLRACGH 1005
            VD TG+ A+L  RKGL LVDL +P+ P  TL HQ++++V VV+ NPH   +    S+SN N L+W + D                       GR                 PL+ TLR HTR V+D++WSP+ PS+LATSS D+  LLWD R+P  P+QT  A +    QVEWNRV+   LA+AH+ ++RVWD+R A+G+            TAH Q+I GLDW       L TCS DKTVK WDV       G +   A P+ R  + PFG  ++T S+ +   +  +W     E ++ GG   GG   S   +G+A  +        VHSF G    + G A+RV    S++Q+VS  + Q LR+  +    L ACG+
Sbjct:   70 VDATGSVAVLAGRKGLHLVDLETPFLPPATLYHQTKLEVTVVKCNPHALFKSHVASSSNRNTLIWDIADIAVGSGASASIGAGQGSSSAYKHGRRNGGGTSGGSESQTTTQPLVATLRAHTRPVSDVAWSPMEPSLLATSSADAKTLLWDMRSPQRPVQTLNAFNTSVIQVEWNRVDATSLATAHDGEVRVWDLR-AAGE---RTVAPAALITAHMQKIYGLDWHPQRMYELVTCSEDKTVKFWDVTQPRVCQGMLSTGA-PVWRAQYTPFGDGLVTISQRMDNTI-RLWALSHSEGDSGGGGDAGGVDISGAGTGAAVTAEL------VHSFVGHSDLIKGMAWRVRPQTSVYQLVSWSKDQELRMWHVDVPQLEACGY 437          
BLAST of mRNA_P-wetherbeei_contig10128.1.2 vs. uniprot
Match: W2WBV3_PHYPR (Uncharacterized protein n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2WBV3_PHYPR)

HSP 1 Score: 219 bits (557), Expect = 2.930e-60
Identity = 140/380 (36.84%), Postives = 195/380 (51.32%), Query Frame = 1
Query:    1 VDLTGNWALLGSRKGLVLVDLTSPYQPAHTLAHQSRVDVGVVRWNPHYSHRGQAVSASNTNVLVWSVEDEG---------------------------------------RPLLTTLRKHTRAVTDLSWSPLHPSVLATSSIDSSVLLWDTRAPHAPIQTFRAPHHGAQQVEWNRVNHALLASAHEKDIRVWDVRKASGDGXXXXXXXXXXXTAHTQEITGLDWSYASESLLATCSNDKTVKLWDVATAGNSGGAIMQRANPLQRVLFAPFGQAVITTSRGIGEQVGSVW-----EKEAAGGRAIGGSPFSKMCSGSASMSRPPYWFVHVHSFEGPRGEVVGAAFRVVGD-SLFQIVSLDRLQHLRLHRIRPSYLRACGH 1005
            VD TG+ A+L  RKGL LVDL +P+ P  TL HQ++++V VV+ NPH   +    S+SN N L+W + D G                                       +PL+ TLR HTR V+D++WSP+ PS+LAT S D+  LLWD R+P  P+QT  A +    QVEWNR +   LA+AH+ ++RVWD+R A+G+            TAH Q+I GLDW       L TCS DKTVK WDV       G +   A P+ R  + PFG  ++T S+ +   +  +W     E ++ G    GG   S   +G+A  +        VHSF G    V G A+RV    S++Q+VS  + Q LR+  +    L ACG+
Sbjct: 1035 VDATGSVAVLAGRKGLHLVDLETPFLPPATLYHQTKLEVTVVKCNPHALFKNHVASSSNRNTLIWDIADVGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTTTQPLVATLRAHTRPVSDVAWSPMEPSLLATCSADAKTLLWDMRSPQRPVQTLNAFNTSVIQVEWNRADATSLATAHDGEVRVWDLR-AAGE---RTVAPAALITAHMQKIYGLDWHPQRMYELVTCSEDKTVKFWDVTQPRMCQGMLTTGA-PVWRAQYTPFGDGLVTISQRMDNTI-RLWALSHGEGDSGGNGDTGGVDVSGSSAGAAVTAEL------VHSFVGHSDLVKGMAWRVRPQTSVYQLVSWSKDQELRMWHVDVPQLEACGY 1402          
BLAST of mRNA_P-wetherbeei_contig10128.1.2 vs. uniprot
Match: K3WSV5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSV5_GLOUD)

HSP 1 Score: 218 bits (555), Expect = 3.790e-60
Identity = 132/355 (37.18%), Postives = 184/355 (51.83%), Query Frame = 1
Query:    1 VDLTGNWALLGSRKGLVLVDLTSPYQPAHTLAHQSRVDVGVVRWNPHYSHRGQAVSASNTNVLVWSVEDEG-----------------RPLLTTLRKHTRAVTDLSWSPLHPSVLATSSIDSSVLLWDTRAPHAPIQTFRAPHHGAQQVEWNRVNHALLASAHEKDIRVWDVRKASGDGXXXXXXXXXXXTAHTQEITGLDWSYASESLLATCSNDKTVKLWDVATAGNSGGAIMQRANPLQRVLFAPFGQAVITTSRGIGEQVGSVWEKEAAGGRAIGGSPFSKMCSGSASMSRPPYWFV--HVHSFEGPRGEVVGAAFRVVGDS-LFQIVSLDRLQHLRLHRIRPSYLRACGH 1005
            VD TG++ +L  RKGL LVDL SPY PA TL HQ++ +V VV+ NPH   +G   S SN N L+W+V + G                 +PL+ TLR HTR V+D+SWSP  P +LAT S D+   LWD R P  P+QT  A    A QVEWNRV+   +A+AH+ ++R+WD R +               TAH Q+I G+DW       L TCS DKTVK W+V       G +   A P+ R  + PFG  ++T+S  +   +  +W                     + S +  P   V   VH++ G    V G  +R   +S ++Q+VS  + Q LR+ R+ P +L ACG+
Sbjct:   76 VDATGSFGVLAGRKGLHLVDLESPYTPAATLHHQTKWEVTVVKCNPHVLFKGHVASTSNHNTLIWNVANGGGVYGSTISSHRPPNNSSQPLIATLRAHTRPVSDVSWSPTEPWILATCSADTKTHLWDIRTPQKPVQTLCAFTSSAIQVEWNRVDQTSIATAHDGEVRIWDTRASD-------KAPAVMITAHMQKIYGIDWHPTRMYELVTCSEDKTVKFWNVTQPRVCQGMLTTGA-PVWRARYTPFGDGLVTSSHRLDNNL-RLW---------------------ALSYASEPSGIVVDPVHTYTGHSDLVKGFVWRARPNSGVYQLVSWSKNQELRMWRVDPQHLEACGY 400          
BLAST of mRNA_P-wetherbeei_contig10128.1.2 vs. uniprot
Match: A0A6A4A2P2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4A2P2_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.250e-59
Identity = 141/380 (37.11%), Postives = 193/380 (50.79%), Query Frame = 1
Query:    1 VDLTGNWALLGSRKGLVLVDLTSPYQPAHTLAHQSRVDVGVVRWNPHYSHRGQAVSASNTNVLVWSVEDEG---------------------------------------RPLLTTLRKHTRAVTDLSWSPLHPSVLATSSIDSSVLLWDTRAPHAPIQTFRAPHHGAQQVEWNRVNHALLASAHEKDIRVWDVRKASGDGXXXXXXXXXXXTAHTQEITGLDWSYASESLLATCSNDKTVKLWDVATAGNSGGAIMQRANPLQRVLFAPFGQAVITTSRGIGEQVGSVW-----EKEAAGGRAIGGSPFSKMCSGSASMSRPPYWFVHVHSFEGPRGEVVGAAFRVVGD-SLFQIVSLDRLQHLRLHRIRPSYLRACGH 1005
            VD TG  A+L  RKGL LVDL +P+ P  TL HQ++++V VV+ NPH   +    S+SN N L+W + D G                                       +PL+ TLR HTR V+D++WSP+ PS+LAT S D+  LLWD R+P  P+QT  A +    QVEWNRV+   LA+AH+ ++RVWD+R A+G+            TAH Q+I GLDW       L TCS+DKTVK WDV       G +   A P+ R  + PFG  ++T S    E    +W     + E+ G    G    S   +GS+  +        VHSF G    V G A+RV    S++Q+VS  + Q LR+  +    L ACG+
Sbjct:   70 VDATGAVAVLAGRKGLHLVDLDAPFLPPATLHHQTKLEVTVVKCNPHALFKSHVASSSNRNTLIWDIADVGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQTTTQPLVATLRAHTRPVSDVAWSPMEPSLLATCSADAKTLLWDMRSPQRPVQTLNAFNTSVIQVEWNRVDATSLATAHDGEVRVWDLR-AAGE---KTVAPAVQITAHMQKIYGLDWHPQRMYELLTCSDDKTVKFWDVTQPRVCQGTLNTGA-PVWRAQYTPFGDGLVTISSQRMENTIRLWALSHGDGESGGNEDAGDVNVSGANAGSSVTAEL------VHSFAGHHDLVRGMAWRVRPQTSVYQLVSWSKDQELRMWHVDVPQLEACGY 438          
BLAST of mRNA_P-wetherbeei_contig10128.1.2 vs. uniprot
Match: A0A0W8DI08_PHYNI (K(+) efflux antiporter 5 n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DI08_PHYNI)

HSP 1 Score: 216 bits (550), Expect = 2.370e-59
Identity = 139/380 (36.58%), Postives = 194/380 (51.05%), Query Frame = 1
Query:    1 VDLTGNWALLGSRKGLVLVDLTSPYQPAHTLAHQSRVDVGVVRWNPHYSHRGQAVSASNTNVLVWSVEDEG---------------------------------------RPLLTTLRKHTRAVTDLSWSPLHPSVLATSSIDSSVLLWDTRAPHAPIQTFRAPHHGAQQVEWNRVNHALLASAHEKDIRVWDVRKASGDGXXXXXXXXXXXTAHTQEITGLDWSYASESLLATCSNDKTVKLWDVATAGNSGGAIMQRANPLQRVLFAPFGQAVITTSRGIGEQVGSVW-----EKEAAGGRAIGGSPFSKMCSGSASMSRPPYWFVHVHSFEGPRGEVVGAAFRVVGD-SLFQIVSLDRLQHLRLHRIRPSYLRACGH 1005
            VD TG+ A+L  RKGL LVDL +P+ P  TL HQ++++V VV+ NPH   +    S+SN N L+W + D G                                       +PL+ TLR HTR V+D++WSP+ PS+LAT S D+  LLWD R+P  P+QT  A +    QVEWNR +   LA+AH+ ++RVWD+R A+G+            TAH Q+I  LDW       L TCS DKTVK WDV       G +   A P+ R  + PFG  ++T S+ +   +  +W     E ++ G    GG   S   +G+A  +        VHSF G    V G A+RV    S++Q+VS  + Q LR+  +    L ACG+
Sbjct:   74 VDATGSVAVLAGRKGLHLVDLETPFLPPATLYHQTKLEVTVVKCNPHALFKNHVASSSNRNTLIWDIADVGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTTTQPLVATLRAHTRPVSDVAWSPMEPSLLATCSADAKTLLWDMRSPQRPVQTLNAFNTSVIQVEWNRADATSLATAHDGEVRVWDLR-AAGE---RTVAPAALITAHMQKIYDLDWHPQRMYELVTCSEDKTVKFWDVTQPRMCQGMLTTGA-PVWRAQYTPFGDGLVTISQRMDNTI-RLWALSHGEGDSGGNGDTGGVDVSGSSAGAAVTAEL------VHSFVGHSDLVKGMAWRVRPQTSVYQLVSWSKDQELRMWHVDVPQLEACGY 441          
BLAST of mRNA_P-wetherbeei_contig10128.1.2 vs. uniprot
Match: A0A5D6XW32_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW32_9STRA)

HSP 1 Score: 214 bits (545), Expect = 1.060e-58
Identity = 139/353 (39.38%), Postives = 179/353 (50.71%), Query Frame = 1
Query:    1 VDLTGNWALLGSRKGLVLVDLTSPYQPAHTLAHQSRVDVGVVRWNPHYSHRGQAVSASNTNVLVWSVE----DEG----------RPLLTTLRKHTRAVTDLSWSPLHPSVLATSSIDSSVLLWDTRAPHAPIQTFRAPHHGAQQVEWNRVNHALLASAHEKDIRVWDVRKASGDGXXXXXXXXXXXTAHTQEITGLDWSYASESLLATCSNDKTVKLWDVATAGNSGGAIMQRANPLQRVLFAPFGQAVITTSRGIGEQVGSVW---EKEAAGGRAIGGSPFSKMCSGSASMSRPPYWFVHVHSFEGPRGEVVGAAFRV-VGDSLFQIVSLDRLQHLRLHRIRPSYLRACGH 1005
            VD TG   +L  RKGL LVDL +P+ PA TL HQ++ DV VV+ +P    R    S SN N L+WS+     D G          +PLL TLR HTR V+D++WSP  P VLAT S D+   LWD R P  P+ T  A    A QV W+RV+ A LA+AH+ D+RVWD R + G             TAH Q+I GLDW       L TCS DKTVK WDVA      G +   A P+ R  + PFG  ++T++  +   +  +W     E  GG  +   P                    VH+F G    V G  +R   G  +FQ+VS  + Q LRL RI   +L ACG+
Sbjct:   63 VDATGALGVLAGRKGLHLVDLEAPFVPAATLHHQTKWDVSVVKCHPLVPFRAHVASTSNHNTLIWSIAHALGDSGSSVSSGAPQQQPLLATLRAHTRPVSDVAWSPADPWVLATCSADTKTHLWDIRTPPTPVLTLCAFSSSATQVAWSRVDGASLATAHDGDVRVWDTRASGGASKGPAVTI----TAHMQKIYGLDWHPTRADELVTCSEDKTVKFWDVAQPRVCQGQLATGA-PVWRARYTPFGDGLVTSAHRLDTSL-RLWALSHAEPGGGGGLAVDP--------------------VHTFAGHSDLVKGFVWRARPGAGVFQLVSWAKNQELRLWRIDAPHLEACGY 389          
BLAST of mRNA_P-wetherbeei_contig10128.1.2 vs. uniprot
Match: H3GH46_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH46_PHYRM)

HSP 1 Score: 212 bits (539), Expect = 6.630e-58
Identity = 137/376 (36.44%), Postives = 191/376 (50.80%), Query Frame = 1
Query:    1 VDLTGNWALLGSRKGLVLVDLTSPYQPAHTLAHQSRVDVGVVRWNPHYSHRGQAVSASNTNVLVWSVED---------------------------------------EGRPLLTTLRKHTRAVTDLSWSPLHPSVLATSSIDSSVLLWDTRAPHAPIQTFRAPHHGAQQVEWNRVNHALLASAHEKDIRVWDVRKASGDGXXXXXXXXXXXTAHTQEITGLDWSYASESLLATCSNDKTVKLWDVATAGNSGGAIMQRANPLQRVLFAPFGQAVITTSRGIGEQVGSVWE-KEAAGGRAIGGSPFSKMCSGSASMSRPPYWFVHVHSFEGPRGEVVGAAFRVVGD-SLFQIVSLDRLQHLRLHRIRPSYLRACGH 1005
            VD TG+ A+L  RKGL LVDL +P+ P  TL HQ++++V VV+ NPH   +    S+SN N L+W + D                                         +PL+ TLR HTR V+D++WSP+ PS+LAT S D+  LLWD R+P  P+QT  A +    QVEWNRV+   LA+AH+ ++RVWD+R A+G+            TAH Q+I GLDW       L TCS DKTVK WDV       G +   A P+ R  + PFG  ++T S+ +   +  +W      GG            SG+++ +      VH  SF G    V G A+RV    S++Q+VS  + Q LR+  +    L ACG+
Sbjct:   74 VDATGSVAVLAGRKGLHLVDLETPFLPPATLHHQTKLEVTVVKCNPHALFKSHVASSSNRNTLIWDIADVRVGSGASPSIGXXXXXXXXXXXXXXXXXXXXXIGGSQSTSQPLVATLRAHTRPVSDVAWSPMEPSLLATCSADAKTLLWDMRSPQRPVQTLNAFNTSVIQVEWNRVDATSLATAHDGEVRVWDLR-AAGE---RAVAPAALITAHMQKIYGLDWHPQRMYELVTCSEDKTVKFWDVTQPRVCQGTLTTGA-PVWRAQYTPFGDGLVTISQRMDNTI-RLWALSHGDGGNGSNDDAGDGDVSGASAGASVTAELVH--SFVGHGDLVKGMAWRVRPQTSVYQLVSWSKDQELRMWHVDVPQLEACGY 441          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10128.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YQN7_9STRA6.990e-9850.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A662XA48_9STRA2.230e-6337.73Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A0P1AAU5_PLAHL3.560e-6237.50Conserved WD40 repeat-containing protein n=1 Tax=P... [more]
D0NC10_PHYIT3.080e-6137.63Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
W2WBV3_PHYPR2.930e-6036.84Uncharacterized protein n=5 Tax=Phytophthora paras... [more]
K3WSV5_GLOUD3.790e-6037.18Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A6A4A2P2_9STRA1.250e-5937.11Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A0W8DI08_PHYNI2.370e-5936.58K(+) efflux antiporter 5 n=4 Tax=Phytophthora TaxI... [more]
A0A5D6XW32_9STRA1.060e-5839.38Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
H3GH46_PHYRM6.630e-5836.44Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10128contigP-wetherbeei_contig10128:531..2049 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog4787.PITG_09447T0
PFAMsWD40,Zn_ribbon_17,rRNA_processing
Model size1005
Max annot lvl4776|Peronosporales
KEGG koko:K20409
KEGG Pathwayko04150,map04150
Hectar predicted targeting categoryother localisation
Exons3
Evalue5.05e-62
EggNOG OGsCOG2319@1|root,KOG0309@2759|Eukaryota,3QEYF@4776|Peronosporales
DescriptionZinc-ribbon, C4HC2 type
Cds size1005
COG categoryS
BRITEko00000,ko00001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185855.844006-CDS-P-wetherbeei_contig10128:530..11761683185855.844006-CDS-P-wetherbeei_contig10128:530..1176Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10128 531..1176 +
1683185855.8523471-CDS-P-wetherbeei_contig10128:1395..15931683185855.8523471-CDS-P-wetherbeei_contig10128:1395..1593Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10128 1396..1593 +
1683185855.8595252-CDS-P-wetherbeei_contig10128:1888..20491683185855.8595252-CDS-P-wetherbeei_contig10128:1888..2049Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10128 1889..2049 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10128.1.2prot_P-wetherbeei_contig10128.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10128 531..2049 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10128.1.2

>prot_P-wetherbeei_contig10128.1.2 ID=prot_P-wetherbeei_contig10128.1.2|Name=mRNA_P-wetherbeei_contig10128.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=335bp
VDLTGNWALLGSRKGLVLVDLTSPYQPAHTLAHQSRVDVGVVRWNPHYSH
RGQAVSASNTNVLVWSVEDEGRPLLTTLRKHTRAVTDLSWSPLHPSVLAT
SSIDSSVLLWDTRAPHAPIQTFRAPHHGAQQVEWNRVNHALLASAHEKDI
RVWDVRKASGDGGGGGGAAAAAATAHTQEITGLDWSYASESLLATCSNDK
TVKLWDVATAGNSGGAIMQRANPLQRVLFAPFGQAVITTSRGIGEQVGSV
WEKEAAGGRAIGGSPFSKMCSGSASMSRPPYWFVHVHSFEGPRGEVVGAA
FRVVGDSLFQIVSLDRLQHLRLHRIRPSYLRACGH
back to top

mRNA from alignment at P-wetherbeei_contig10128:531..2049+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10128.1.2 ID=mRNA_P-wetherbeei_contig10128.1.2|Name=mRNA_P-wetherbeei_contig10128.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1519bp|location=Sequence derived from alignment at P-wetherbeei_contig10128:531..2049+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGATCTCACGGGAAACTGGGCGCTGCTCGGCTCGCGCAAGGGGCTGGT GCTAGTCGACCTCACGAGCCCCTATCAGCCGGCCCACACGCTCGCCCACC AGAGCCGCGTCGACGTCGGCGTCGTCCGCTGGAACCCGCACTATTCGCAT CGCGGGCAGGCCGTCAGCGCCAGCAACACAAATGTGTTGGTGTGGTCCGT CGAAGACGAAGGCCGCCCACTTCTGACGACGCTGCGCAAGCACACGCGGG CCGTCACAGACCTGTCGTGGTCGCCGCTGCACCCGTCCGTTTTGGCGACG AGTAGCATCGACTCCTCGGTGCTGCTTTGGGATACGCGCGCCCCGCACGC GCCGATCCAGACTTTCCGCGCGCCGCACCATGGTGCGCAGCAAGTGGAGT GGAACCGCGTTAACCACGCGCTGCTCGCGTCGGCGCACGAGAAGGATATT CGCGTATGGGACGTCCGCAAGGCTTCCGGCGACGGTGGCGGCGGCGGGGG CGCGGCGGCGGCGGCCGCCACGGCGCACACGCAGGAGATTACTGGGCTCG ACTGGTCCTACGCGAGCGAGTCGCTGCTCGCCACTTGCTCGAACGACAAG ACAGTCAAGTTGTGGGACGTTGCCACGGCCGGGAATAGCGGGGGCGGTGG CACCGCCGGCGGGGCGGGCGGCGACGGCAGCGGCAGTGGCGACGATGGCA GGGGCGGGACTACTGGTCCAGCTGGCGTGGGCGCCGAAGCAGGCGGAGTA GGCGGCGGCGGCGCCGGCGAAACTGATCACGATGCGGGTTCCGGCGTCGC GGCGGACGGCGAAGGCGGCGACAGCGCGGTGGTCGGTGGCCTGCCGGCGA CACTAATACCGCTAGCCATCATGCAGCGGGCCAACCCGCTCCAGCGCGTC CTATTCGCGCCGTTCGGCCAGGCCGTTATCACCACGTCCCGCGGAATTGG CGAGCAGGTGGGCTCGGTGTGGGAGAAGGAGGCTGCAGGAGGAAGGGCGA TTGGCGGATCGCCATTTTCAAAGATGTGCAGTGGTTCTGCATCGATGAGC CGGCCACCGTACTGTCCGGCGTGTCTTCTGTCAGCGATGGGCGCTTGCTG CCCTTTTGAAGATCCACGCCGATGCGCTGCAACTGCATTTCCTGAGACCG CTGCCTTCTTTTTTGTACGCTACTTCCCCTTCTTCGCTGCCGCCTCTGTT CTTCTCTTCTTACCACGCTACCGTCACTTCTTTTTCGCTGCACTTCAACG CTCCTCCTTCTTTCTGCTCCCGCCTGCTTTCGCTGCGAAACAAATCCAAC AAACAGGTGGACGCGCCGCAGACCATCCGGCTGTGGTACACGGGCGCCCT CGAGGAAGGGTTCGTCCACGTGCATTCCTTCGAGGGCCCCCGCGGAGAAG TGGTCGGCGCCGCCTTCCGCGTCGTCGGCGACTCTCTCTTCCAAATTGTC AGCCTCGACCGGCTGCAGCACCTGCGGCTGCATCGCATCCGGCCCAGCTA CCTCCGCGCGTGCGGCCAC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig10128:531..2049+

>mRNA_P-wetherbeei_contig10128.1.2 ID=mRNA_P-wetherbeei_contig10128.1.2|Name=mRNA_P-wetherbeei_contig10128.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1005bp|location=Sequence derived from alignment at P-wetherbeei_contig10128:531..2049+ (Phaeothamnion wetherbeei SAG_119_79)
GTGGATCTCACGGGAAACTGGGCGCTGCTCGGCTCGCGCAAGGGGCTGGT
GCTAGTCGACCTCACGAGCCCCTATCAGCCGGCCCACACGCTCGCCCACC
AGAGCCGCGTCGACGTCGGCGTCGTCCGCTGGAACCCGCACTATTCGCAT
CGCGGGCAGGCCGTCAGCGCCAGCAACACAAATGTGTTGGTGTGGTCCGT
CGAAGACGAAGGCCGCCCACTTCTGACGACGCTGCGCAAGCACACGCGGG
CCGTCACAGACCTGTCGTGGTCGCCGCTGCACCCGTCCGTTTTGGCGACG
AGTAGCATCGACTCCTCGGTGCTGCTTTGGGATACGCGCGCCCCGCACGC
GCCGATCCAGACTTTCCGCGCGCCGCACCATGGTGCGCAGCAAGTGGAGT
GGAACCGCGTTAACCACGCGCTGCTCGCGTCGGCGCACGAGAAGGATATT
CGCGTATGGGACGTCCGCAAGGCTTCCGGCGACGGTGGCGGCGGCGGGGG
CGCGGCGGCGGCGGCCGCCACGGCGCACACGCAGGAGATTACTGGGCTCG
ACTGGTCCTACGCGAGCGAGTCGCTGCTCGCCACTTGCTCGAACGACAAG
ACAGTCAAGTTGTGGGACGTTGCCACGGCCGGGAATAGCGGGGGCGCCAT
CATGCAGCGGGCCAACCCGCTCCAGCGCGTCCTATTCGCGCCGTTCGGCC
AGGCCGTTATCACCACGTCCCGCGGAATTGGCGAGCAGGTGGGCTCGGTG
TGGGAGAAGGAGGCTGCAGGAGGAAGGGCGATTGGCGGATCGCCATTTTC
AAAGATGTGCAGTGGTTCTGCATCGATGAGCCGGCCACCGTACTGGTTCG
TCCACGTGCATTCCTTCGAGGGCCCCCGCGGAGAAGTGGTCGGCGCCGCC
TTCCGCGTCGTCGGCGACTCTCTCTTCCAAATTGTCAGCCTCGACCGGCT
GCAGCACCTGCGGCTGCATCGCATCCGGCCCAGCTACCTCCGCGCGTGCG
GCCAC
back to top