mRNA_P-wetherbeei_contig10074.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10074.3.1
Unique NamemRNA_P-wetherbeei_contig10074.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10074.3.1 vs. uniprot
Match: A0A352KGC0_9PROT (Methylmalonyl Co-A mutase-associated GTPase MeaB n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KGC0_9PROT)

HSP 1 Score: 367 bits (943), Expect = 1.020e-125
Identity = 185/253 (73.12%), Postives = 218/253 (86.17%), Query Frame = 1
Query:    1 PPGVGKSTLINALLKSWRRQGRTVGVIAVDPTSRKTGGALLGDRTRLSTDPEDNGVFVRSMAARERLGGLAALTLPAMILMRAVYDVVLIETVGIGQSETDVANVSDTVIFCIQPGSGDSLQFMKAGIMEVPHIAVVTKADMTAAARRAKADVEGALGLSETGAGEWLAPVLSLSAARHDGIEELVGEIDRHRDWLAQTGEGARTRTRQTRQWLGEMVREQFGLRGLAKVNGEIDAAPHASPFSRASVIIRKL 759
            PPGVGKSTLIN+L+ +WR  GRTVGVIAVDPTSR+TGGALLGDRTRL+TDPED+G+FVRSMAAR+RLGGLAALT+PAM+LMRAVYD+VL+ETVGIGQSETD+A+++DTVIFCIQPGSGDSLQ+MKAGIMEVPHIAVVTKADM AAARRAKADVEGA+GLS+ G   W+  VL+LSAAR +GI+ LV EIDRHRDWL ++GEGARTR  Q R WL E+VRE+FG  GLA+   ++      +PF+ A  I + L
Sbjct:   38 PPGVGKSTLINSLIGAWRAAGRTVGVIAVDPTSRRTGGALLGDRTRLATDPEDHGIFVRSMAARDRLGGLAALTMPAMVLMRAVYDIVLVETVGIGQSETDIADLADTVIFCIQPGSGDSLQYMKAGIMEVPHIAVVTKADMGAAARRAKADVEGAMGLSDLGGDGWMPQVLTLSAARSEGIDALVAEIDRHRDWLERSGEGARTRLAQARHWLHELVREEFGRHGLAQARDQLTGQSGNTPFAAARAISQTL 290          
BLAST of mRNA_P-wetherbeei_contig10074.3.1 vs. uniprot
Match: A0A3C0TS25_9PROT (Methylmalonyl Co-A mutase-associated GTPase MeaB n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TS25_9PROT)

HSP 1 Score: 360 bits (923), Expect = 2.010e-122
Identity = 186/253 (73.52%), Postives = 212/253 (83.79%), Query Frame = 1
Query:    1 PPGVGKSTLINALLKSWRRQGRTVGVIAVDPTSRKTGGALLGDRTRLSTDPEDNGVFVRSMAARERLGGLAALTLPAMILMRAVYDVVLIETVGIGQSETDVANVSDTVIFCIQPGSGDSLQFMKAGIMEVPHIAVVTKADMTAAARRAKADVEGALGLSETGAGEWLAPVLSLSAARHDGIEELVGEIDRHRDWLAQTGEGARTRTRQTRQWLGEMVREQFGLRGLAKVNGEIDAAPHASPFSRASVIIRKL 759
            PPGVGKSTLINAL++ WR +G +VGVIAVDPTSRKTGGALLGDRTRL+ DPED+ VFVRSMAAR RLGGLAALT+PAM+LMRAV+D+VLIETVGIGQSETDVANV DTVIFC+QPGSGDSLQFMKAGIMEVPHIAVVTK+D+TAAARRA+AD+EGALGL+E+ AG W  PV+ LSAAR +G+E L   I+RHR WLA TGEG R R  Q R WL + VREQFGLRGL +    + A    SPF RA+ I + L
Sbjct:   57 PPGVGKSTLINALVQIWRSRGLSVGVIAVDPTSRKTGGALLGDRTRLNIDPEDDQVFVRSMAARARLGGLAALTIPAMVLMRAVFDIVLIETVGIGQSETDVANVCDTVIFCVQPGSGDSLQFMKAGIMEVPHIAVVTKSDLTAAARRARADIEGALGLAESPAGAWTVPVMLLSAARREGVEALADAIERHRLWLAGTGEGGRMRALQARHWLEDSVREQFGLRGLQRAKQALSAPSGLSPFRRAADISKSL 309          
BLAST of mRNA_P-wetherbeei_contig10074.3.1 vs. uniprot
Match: A0A501PAQ5_9PROT (Methylmalonyl Co-A mutase-associated GTPase MeaB n=1 Tax=Emcibacter nanhaiensis TaxID=1505037 RepID=A0A501PAQ5_9PROT)

HSP 1 Score: 343 bits (881), Expect = 4.530e-116
Identity = 180/254 (70.87%), Postives = 208/254 (81.89%), Query Frame = 1
Query:    1 PPGVGKSTLINALLKSWRRQGRTVGVIAVDPTSRKTGGALLGDRTRLSTDPEDNGVFVRSMAARERLGGLAALTLPAMILMRAVYDVVLIETVGIGQSETDVANVSDTVIFCIQPGSGDSLQFMKAGIMEVPHIAVVTKADMTAAARRAKADVEGALGLSETGAGEWLAPVLSLSAARHDGIEELVGEIDRHRDWLAQTGEGARTRTRQTRQWLGEMVREQFGLRGLAKVNGEIDAAPHASPFSRASVIIRKLM 762
            PPGVGKSTLINAL+ +WR+ G+TVGVIAVDP+SR+TGGALLGDRTR +T+PED G+FVRSMAARERLGGLA LT+PAMILMRAVYD+VL+ETVG+GQSETDVA+V+DTVIFCIQPGSGDSLQFMKAGIMEVPHI VVTKADM A A RA+ADV GALGLS+ G   W  PVL LSA+  +GI++LV  +D H DWL QTGE  R+R  Q + WL +MVRE++G  GL KV   I  A   SPF R SV I +LM
Sbjct:   59 PPGVGKSTLINALIATWRKSGKTVGVIAVDPSSRRTGGALLGDRTRFATNPEDEGIFVRSMAARERLGGLAGLTVPAMILMRAVYDIVLVETVGVGQSETDVASVADTVIFCIQPGSGDSLQFMKAGIMEVPHIMVVTKADMGARADRARADVAGALGLSDAGQEGWQVPVLKLSASSGEGIKDLVAAVDGHADWLQQTGELERSRQAQAQSWLRDMVREKYGSEGLKKVKDRIALAAGQSPF-RKSVEIFRLM 311          
BLAST of mRNA_P-wetherbeei_contig10074.3.1 vs. uniprot
Match: UPI00110578BF (methylmalonyl Co-A mutase-associated GTPase MeaB n=1 Tax=Luteithermobacter gelatinilyticus TaxID=2582913 RepID=UPI00110578BF)

HSP 1 Score: 332 bits (851), Expect = 2.710e-111
Identity = 174/253 (68.77%), Postives = 204/253 (80.63%), Query Frame = 1
Query:    1 PPGVGKSTLINALLKSWRRQGRTVGVIAVDPTSRKTGGALLGDRTRLSTDPEDNGVFVRSMAARERLGGLAALTLPAMILMRAVYDVVLIETVGIGQSETDVANVSDTVIFCIQPGSGDSLQFMKAGIMEVPHIAVVTKADMTAAARRAKADVEGALGLSE---TGAG-----EWLAPVLSLSAARHDGIEELVGEIDRHRDWLAQTGEGARTRTRQTRQWLGEMVREQFGLRGLAKVNGEIDAAPHASPFSR 735
            PPGVGKSTLI +L+  WR+ GRTVGVIAVDP+SR+TGGALLGDRTRL+TDPED G++VRSMAAR+RLGGLA LT PAMILMRAVYD+VL+ETVG+GQSETDVA V+DTVIFCIQPGSGDSLQFMKAGIMEVPHI VVTKADM A A RA+ADV GALGLSE    G G     +W  PVL LSAA+ +G+EEL+  +D H +WL ++G   + R  Q + WL E VRE++G +GL KV  ++D  P ASPFSR
Sbjct:   58 PPGVGKSTLIGSLIAGWRKMGRTVGVIAVDPSSRRTGGALLGDRTRLATDPEDEGIYVRSMAARDRLGGLAGLTAPAMILMRAVYDIVLVETVGVGQSETDVAGVADTVIFCIQPGSGDSLQFMKAGIMEVPHIMVVTKADMGARAERARADVAGALGLSEHLPAGEGSEDVADWAIPVLKLSAAQGEGLEELLQAVDDHENWLKRSGMLEKFRQAQGQAWLRESVREKYGTQGLKKVADQLDLPPGASPFSR 310          
BLAST of mRNA_P-wetherbeei_contig10074.3.1 vs. uniprot
Match: UPI001931FA6C (methylmalonyl Co-A mutase-associated GTPase MeaB n=5 Tax=Skermanella TaxID=204447 RepID=UPI001931FA6C)

HSP 1 Score: 318 bits (816), Expect = 3.260e-106
Identity = 161/254 (63.39%), Postives = 194/254 (76.38%), Query Frame = 1
Query:    1 PPGVGKSTLINALLKSWRRQGRTVGVIAVDPTSRKTGGALLGDRTRLSTDPEDNGVFVRSMAARERLGGLAALTLPAMILMRAVYDVVLIETVGIGQSETDVANVSDTVIFCIQPGSGDSLQFMKAGIMEVPHIAVVTKADMTAAARRAKADVEGALGLSETGAGEWLAPVLSLSAARHDGIEELVGEIDRHRDWLAQTGEGARTRTRQTRQWLGEMVREQFGLRGLAKVNGEIDAAPHASPFSRASVIIRKLM 762
            PPGVGKSTL  AL+  +RR G+TVG IAVDP+SR++GGALLGDRTRL TDPED G FVRSMAAR+RLGGLA LT+ AM+LMRAVYD+VLIETVG+GQSETD+A  +DTV+FC+QPGSGDSLQFMKAGI+E+P I VVTKADM AAA RA+ADV GAL L+E   G W  PVL+LS  +  G+ EL+  +D H  WLA+TG   R R  Q R WL E VRE+FG  G+ +  G +D  P A+PF     + R+L+
Sbjct:   54 PPGVGKSTLTGALITEYRRLGKTVGCIAVDPSSRRSGGALLGDRTRLGTDPEDAGCFVRSMAARDRLGGLAGLTVAAMVLMRAVYDIVLIETVGVGQSETDIAGTADTVVFCVQPGSGDSLQFMKAGIVEIPDIVVVTKADMGAAAERARADVRGALSLAEEARGGWTVPVLALSVQQRQGVGELIATVDGHAAWLAETGRLKRLRHAQARSWLAEAVRERFGREGIRRA-GPLDLGPEAAPFGELRAVARRLL 306          
BLAST of mRNA_P-wetherbeei_contig10074.3.1 vs. uniprot
Match: UPI00115C9756 (methylmalonyl Co-A mutase-associated GTPase MeaB n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115C9756)

HSP 1 Score: 310 bits (794), Expect = 5.640e-103
Identity = 159/253 (62.85%), Postives = 197/253 (77.87%), Query Frame = 1
Query:    1 PPGVGKSTLINALLKSWRRQGRTVGVIAVDPTSRKTGGALLGDRTRLSTDPEDNGVFVRSMAARERLGGLAALTLPAMILMRAVYDVVLIETVGIGQSETDVANVSDTVIFCIQPGSGDSLQFMKAGIMEVPHIAVVTKADMTAAARRAKADVEGALGLSETGAGEWLAPVLSLSAARHDGIEELVGEIDRHRDWLAQTGEGARTRTRQTRQWLGEMVREQFGLRGLAKVNGEIDAAPHASPFSRASVIIRKL 759
            PPGVGKSTL+NAL+  WR QGR VG IAVDP+SR++GGALLGDRTRL+TDPED  +FVRSMAAR+RLGGLAALT+ +M+LMRA++DVVLIETVG+GQSETDV  V+DTV+FC+QPGSGDSLQFMKAGI E+PH+ VVTKADM  AA RA+ADV+GAL L++   G W  PVL +S+ R +G++EL+  IDRH DW+ Q G     R  Q   WL E VRE+FG  G+ +  G++  AP  SPF R + +  +L
Sbjct:   51 PPGVGKSTLMNALIGGWRGQGRRVGCIAVDPSSRRSGGALLGDRTRLATDPEDQDIFVRSMAARDRLGGLAALTVSSMVLMRALFDVVLIETVGVGQSETDVVGVADTVLFCVQPGSGDSLQFMKAGIAEIPHVVVVTKADMGPAANRARADVKGALSLADHRDG-WDIPVLLVSSLRKEGVDELLQVIDRHHDWMNQAGRLQAARHAQAESWLEEAVRERFGREGVRRA-GDLRLAPDESPFGRLAAVTERL 301          
BLAST of mRNA_P-wetherbeei_contig10074.3.1 vs. uniprot
Match: W9HBN5_9PROT (ArgK protein n=1 Tax=Skermanella stibiiresistens SB22 TaxID=1385369 RepID=W9HBN5_9PROT)

HSP 1 Score: 310 bits (793), Expect = 9.130e-103
Identity = 160/254 (62.99%), Postives = 195/254 (76.77%), Query Frame = 1
Query:    1 PPGVGKSTLINALLKSWRRQGRTVGVIAVDPTSRKTGGALLGDRTRLSTDPEDNGVFVRSMAARERLGGLAALTLPAMILMRAVYDVVLIETVGIGQSETDVANVSDTVIFCIQPGSGDSLQFMKAGIMEVPHIAVVTKADMTAAARRAKADVEGALGLSETGAGEWLAPVLSLSAARHDGIEELVGEIDRHRDWLAQTGEGARTRTRQTRQWLGEMVREQFGLRGLAKVNGEIDAAPHASPFSRASVIIRKLM 762
            PPGVGKSTL  AL+  +RR  RTVG IAVDP+SR++GGALLGDRTRL TDPED G FVRSMAAR+RLGGLA LT+ AM+LMRAVYDVVLIETVG+GQSETD+A  +DTV+FC+QPGSGDSLQFMKAGI+E+P I  VTKAD+ AAA+RA+ADV+GAL L+E   G+W  PVL+LS  +  GI +L+  +D H  WLA+TG  A  R  Q R WL E +RE+FG  G+ +  G ID AP  +PF     I ++L+
Sbjct:   55 PPGVGKSTLTGALISEYRRLDRTVGCIAVDPSSRRSGGALLGDRTRLGTDPEDAGCFVRSMAARDRLGGLAGLTVAAMVLMRAVYDVVLIETVGVGQSETDIAGTADTVVFCVQPGSGDSLQFMKAGIVEIPDIVAVTKADLGAAAQRARADVKGALSLAEAARGDWEIPVLALSVQQRQGIGDLIRALDDHAAWLARTGRLASQRQDQARVWLVEAIRERFGREGVRRA-GTIDLAPGTAPFGELRAISQRLL 307          
BLAST of mRNA_P-wetherbeei_contig10074.3.1 vs. uniprot
Match: Q2W737_MAGSA (Putative periplasmic protein kinase ArgK and related GTPase of G3E family n=3 Tax=Magnetospirillum TaxID=13134 RepID=Q2W737_MAGSA)

HSP 1 Score: 309 bits (792), Expect = 1.380e-102
Identity = 162/254 (63.78%), Postives = 197/254 (77.56%), Query Frame = 1
Query:    1 PPGVGKSTLINALLKSWRRQGRTVGVIAVDPTSRKTGGALLGDRTRLSTDPEDNGVFVRSMAARERLGGLAALTLPAMILMRAVYDVVLIETVGIGQSETDVANVSDTVIFCIQPGSGDSLQFMKAGIMEVPHIAVVTKADMTAAARRAKADVEGALGLSETGAGE-WLAPVLSLSAARHDGIEELVGEIDRHRDWLAQTGEGARTRTRQTRQWLGEMVREQFGLRGLAKVNGEIDAAPHASPFSRASVIIRKL 759
            PPGVGKSTL+NAL+ +WR  GRTVG IAVDP+SR++GGALLGDRTRL+TDPED G+FVRSMAAR+RLGGLA LT+ AM+LMRA++DVVLIETVG+GQSETDV  V+DTV+FC+QPGSGDSLQFMKAGI E+PH+ VVTKADM AAA RA+ADV GALGL   G  + W +PVL +S+AR +G+E LV  ID H  WL + G  A  R  Q   WL E VRE++G  G+ +  G++      SPF+R SV+   L
Sbjct:   51 PPGVGKSTLMNALIGAWRTSGRTVGCIAVDPSSRRSGGALLGDRTRLTTDPEDQGIFVRSMAARDRLGGLAGLTVSAMVLMRALFDVVLIETVGVGQSETDVVGVADTVLFCVQPGSGDSLQFMKAGIAEIPHVVVVTKADMGAAAVRARADVLGALGLGGGGDHDGWESPVLMVSSARREGVEGLVSAIDGHAAWLGEAGRLAAARHAQAEAWLEEAVRERYGREGVRRA-GDLSLGLGESPFARLSVLSASL 303          
BLAST of mRNA_P-wetherbeei_contig10074.3.1 vs. uniprot
Match: M3A8C6_9PROT (Periplasmic protein kinase ArgK n=3 Tax=Magnetospirillum TaxID=13134 RepID=M3A8C6_9PROT)

HSP 1 Score: 308 bits (789), Expect = 3.820e-102
Identity = 162/253 (64.03%), Postives = 194/253 (76.68%), Query Frame = 1
Query:    1 PPGVGKSTLINALLKSWRRQGRTVGVIAVDPTSRKTGGALLGDRTRLSTDPEDNGVFVRSMAARERLGGLAALTLPAMILMRAVYDVVLIETVGIGQSETDVANVSDTVIFCIQPGSGDSLQFMKAGIMEVPHIAVVTKADMTAAARRAKADVEGALGLSETGAGEWLAPVLSLSAARHDGIEELVGEIDRHRDWLAQTGEGARTRTRQTRQWLGEMVREQFGLRGLAKVNGEIDAAPHASPFSRASVIIRKL 759
            PPGVGKSTL+NAL+  WR QGRTVG IAVDP+SR++GGALLGDRTRL+TDPED G+FVRSMAAR+RLGGLA LT+ AM+LMRA++DVVLIETVG+GQSETDV  V+DTV+FC+QPGSGDSLQFMKAGI E+PH+ VVTKADM AAA RA+ADV GALGL       W  PVL +S+AR +G+E LV  ID H   LA+ G  A  R  Q   WL E VRE+FG  G+ +  G++     ASPF R + +  +L
Sbjct:   51 PPGVGKSTLMNALIAGWRGQGRTVGCIAVDPSSRRSGGALLGDRTRLTTDPEDQGIFVRSMAARDRLGGLAGLTVSAMVLMRAIFDVVLIETVGVGQSETDVVGVADTVLFCVQPGSGDSLQFMKAGIAEIPHVVVVTKADMGAAAVRARADVLGALGLGGGAHDGWEVPVLMVSSARREGVEALVSAIDGHAAGLAEGGRLAAARHAQAEAWLEEAVRERFGREGVRRA-GDLSLKAGASPFVRLAELSARL 302          
BLAST of mRNA_P-wetherbeei_contig10074.3.1 vs. uniprot
Match: A0A2N3PPE5_9PROT (Methylmalonyl Co-A mutase-associated GTPase MeaB n=1 Tax=Telmatospirillum siberiense TaxID=382514 RepID=A0A2N3PPE5_9PROT)

HSP 1 Score: 308 bits (788), Expect = 5.420e-102
Identity = 164/253 (64.82%), Postives = 195/253 (77.08%), Query Frame = 1
Query:    1 PPGVGKSTLINALLKSWRRQGRTVGVIAVDPTSRKTGGALLGDRTRLSTDPEDNGVFVRSMAARERLGGLAALTLPAMILMRAVYDVVLIETVGIGQSETDVANVSDTVIFCIQPGSGDSLQFMKAGIMEVPHIAVVTKADMTAAARRAKADVEGALGLSETGAGEWLAPVLSLSAARHDGIEELVGEIDRHRDWLAQTGEGARTRTRQTRQWLGEMVREQFGLRGLAKVNGEIDAAPHASPFSRASVIIRKL 759
            PPGVGKSTL+N L+  WR +GRTVG IAVDP+SR++GGALLGDRTRLSTDPED GVFVRSMAAR+RLGGLA LT+ AM+LMRA+YDVVLIETVG+GQSETDV  V+DTVI CIQPGSGDSLQ+MKAGI E+PHI VVTKADM AAA RA+ADV GAL L+E  A +W  PVL LSAA   G EEL+  ++ H  +L Q G+ +R R  Q  QWL E VRE++G  G+ +  G +      SPF R + + R+L
Sbjct:   55 PPGVGKSTLVNTLIHGWRERGRTVGCIAVDPSSRRSGGALLGDRTRLSTDPEDQGVFVRSMAARDRLGGLAGLTVSAMVLMRALYDVVLIETVGVGQSETDVVGVADTVILCIQPGSGDSLQYMKAGIAEIPHIVVVTKADMGAAAERARADVAGALSLAEAAA-DWEVPVLMLSAAGRLGTEELIDAVEAHGAYLRQRGDISRIRKEQAAQWLTEAVRERYGRDGIRRA-GYLGLDGADSPFRRLAEVSRRL 305          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10074.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A352KGC0_9PROT1.020e-12573.12Methylmalonyl Co-A mutase-associated GTPase MeaB n... [more]
A0A3C0TS25_9PROT2.010e-12273.52Methylmalonyl Co-A mutase-associated GTPase MeaB n... [more]
A0A501PAQ5_9PROT4.530e-11670.87Methylmalonyl Co-A mutase-associated GTPase MeaB n... [more]
UPI00110578BF2.710e-11168.77methylmalonyl Co-A mutase-associated GTPase MeaB n... [more]
UPI001931FA6C3.260e-10663.39methylmalonyl Co-A mutase-associated GTPase MeaB n... [more]
UPI00115C97565.640e-10362.85methylmalonyl Co-A mutase-associated GTPase MeaB n... [more]
W9HBN5_9PROT9.130e-10362.99ArgK protein n=1 Tax=Skermanella stibiiresistens S... [more]
Q2W737_MAGSA1.380e-10263.78Putative periplasmic protein kinase ArgK and relat... [more]
M3A8C6_9PROT3.820e-10264.03Periplasmic protein kinase ArgK n=3 Tax=Magnetospi... [more]
A0A2N3PPE5_9PROT5.420e-10264.82Methylmalonyl Co-A mutase-associated GTPase MeaB n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10074contigP-wetherbeei_contig10074:1647..2411 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1244869.H261_16825
PFAMsArgK
Model size765
Max annot lvl204441|Rhodospirillales
KEGG koko:K07588
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.26e-103
EggNOG OGsCOG1703@1|root,COG1703@2|Bacteria,1R44P@1224|Proteobacteria,2TW2E@28211|Alphaproteobacteria,2JR6W@204441|Rhodospirillales
Descriptionperiplasmic protein kinase ArgK and related GTPases of G3E family
Cds size765
COG categoryE
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185853.4858577-CDS-P-wetherbeei_contig10074:1646..24111683185853.4858577-CDS-P-wetherbeei_contig10074:1646..2411Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10074 1647..2411 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10074.3.1prot_P-wetherbeei_contig10074.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10074 1647..2411 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10074.3.1

>prot_P-wetherbeei_contig10074.3.1 ID=prot_P-wetherbeei_contig10074.3.1|Name=mRNA_P-wetherbeei_contig10074.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=255bp
PPGVGKSTLINALLKSWRRQGRTVGVIAVDPTSRKTGGALLGDRTRLSTD
PEDNGVFVRSMAARERLGGLAALTLPAMILMRAVYDVVLIETVGIGQSET
DVANVSDTVIFCIQPGSGDSLQFMKAGIMEVPHIAVVTKADMTAAARRAK
ADVEGALGLSETGAGEWLAPVLSLSAARHDGIEELVGEIDRHRDWLAQTG
EGARTRTRQTRQWLGEMVREQFGLRGLAKVNGEIDAAPHASPFSRASVII
RKLM*
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mRNA from alignment at P-wetherbeei_contig10074:1647..2411-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10074.3.1 ID=mRNA_P-wetherbeei_contig10074.3.1|Name=mRNA_P-wetherbeei_contig10074.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig10074:1647..2411- (Phaeothamnion wetherbeei SAG_119_79)
CCGCCCGGTGTTGGCAAATCCACCCTGATCAATGCGCTGCTGAAAAGCTG GCGGCGCCAGGGGCGCACGGTTGGCGTGATCGCGGTTGATCCCACGTCGC GCAAAACCGGCGGCGCGCTTTTGGGTGATCGCACGCGGCTGTCAACCGAC CCGGAAGACAATGGCGTTTTTGTGCGCTCCATGGCGGCGCGCGAACGGCT GGGCGGGCTGGCGGCGCTGACGCTTCCCGCGATGATCCTGATGCGCGCTG TCTATGATGTGGTGCTGATCGAAACGGTTGGCATCGGCCAGTCGGAAACC GATGTGGCGAATGTGTCTGATACTGTGATTTTCTGCATTCAGCCTGGTTC CGGCGACAGCCTGCAATTCATGAAGGCAGGCATCATGGAAGTGCCGCATA TCGCTGTGGTGACGAAAGCCGATATGACGGCCGCGGCGCGGCGCGCCAAA GCGGATGTGGAAGGCGCGCTGGGCCTTTCTGAAACAGGCGCCGGCGAATG GCTGGCGCCGGTGCTGAGTTTAAGTGCGGCGCGCCATGACGGGATCGAGG AATTGGTGGGCGAGATTGACCGGCATCGGGACTGGCTGGCCCAAACCGGC GAAGGCGCGCGCACCCGCACCAGACAGACGCGTCAATGGCTGGGTGAAAT GGTGCGCGAACAGTTTGGCCTGCGCGGGCTTGCAAAGGTCAATGGTGAAA TAGATGCGGCCCCCCATGCGTCACCATTTTCGCGGGCGTCCGTAATTATC CGTAAGCTGATGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10074:1647..2411-

>mRNA_P-wetherbeei_contig10074.3.1 ID=mRNA_P-wetherbeei_contig10074.3.1|Name=mRNA_P-wetherbeei_contig10074.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=765bp|location=Sequence derived from alignment at P-wetherbeei_contig10074:1647..2411- (Phaeothamnion wetherbeei SAG_119_79)
CCGCCCGGTGTTGGCAAATCCACCCTGATCAATGCGCTGCTGAAAAGCTG
GCGGCGCCAGGGGCGCACGGTTGGCGTGATCGCGGTTGATCCCACGTCGC
GCAAAACCGGCGGCGCGCTTTTGGGTGATCGCACGCGGCTGTCAACCGAC
CCGGAAGACAATGGCGTTTTTGTGCGCTCCATGGCGGCGCGCGAACGGCT
GGGCGGGCTGGCGGCGCTGACGCTTCCCGCGATGATCCTGATGCGCGCTG
TCTATGATGTGGTGCTGATCGAAACGGTTGGCATCGGCCAGTCGGAAACC
GATGTGGCGAATGTGTCTGATACTGTGATTTTCTGCATTCAGCCTGGTTC
CGGCGACAGCCTGCAATTCATGAAGGCAGGCATCATGGAAGTGCCGCATA
TCGCTGTGGTGACGAAAGCCGATATGACGGCCGCGGCGCGGCGCGCCAAA
GCGGATGTGGAAGGCGCGCTGGGCCTTTCTGAAACAGGCGCCGGCGAATG
GCTGGCGCCGGTGCTGAGTTTAAGTGCGGCGCGCCATGACGGGATCGAGG
AATTGGTGGGCGAGATTGACCGGCATCGGGACTGGCTGGCCCAAACCGGC
GAAGGCGCGCGCACCCGCACCAGACAGACGCGTCAATGGCTGGGTGAAAT
GGTGCGCGAACAGTTTGGCCTGCGCGGGCTTGCAAAGGTCAATGGTGAAA
TAGATGCGGCCCCCCATGCGTCACCATTTTCGCGGGCGTCCGTAATTATC
CGTAAGCTGATGTAA
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