mRNA_P-wetherbeei_contig1007.8.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1007.8.1 vs. uniprot
Match: D7FV35_ECTSI (Asp_Arg_Hydrox domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV35_ECTSI) HSP 1 Score: 118 bits (295), Expect = 4.600e-30 Identity = 54/81 (66.67%), Postives = 67/81 (82.72%), Query Frame = 1 Query: 1 GLDVPEGECWMRSGGEQREWRNGEALILDTSFEHETRNNATTAARYVMIVDFWHPQLTSPEQEALAFVYDLRNRYDSGLVP 243 G+DVPE +CWMR G E+R W NG+ALILDTSFEHETRN++ R V+I+D+WHP LT EQEALAFVYDLRN+++SG +P Sbjct: 253 GVDVPE-DCWMRVGEEKRSWENGKALILDTSFEHETRNDSRRD-RIVLIIDYWHPDLTKAEQEALAFVYDLRNKFESGEIP 331
BLAST of mRNA_P-wetherbeei_contig1007.8.1 vs. uniprot
Match: K0RKH1_THAOC (Asp_Arg_Hydrox domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RKH1_THAOC) HSP 1 Score: 104 bits (259), Expect = 5.020e-25 Identity = 48/83 (57.83%), Postives = 59/83 (71.08%), Query Frame = 1 Query: 1 GLDVPEGECWMRSGGEQREWRNGEALILDTSFEHETRNNATTAARYVMIVDFWHPQLTSPEQEALAFVYDLRNRYDSGLVPTR 249 GL VPEG CW++SG E+R W G+ LDTSFEH T N T R+V+I+DFWHP LT E+ L FVYDLRN+++SG VP R Sbjct: 208 GLRVPEG-CWIKSGNEERTWEEGKLTTLDTSFEHST-GNPTDGERHVLIIDFWHPDLTEAERAGLEFVYDLRNKFESGRVPFR 288
BLAST of mRNA_P-wetherbeei_contig1007.8.1 vs. uniprot
Match: A0A7S0AGB4_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AGB4_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 8.490e-25 Identity = 46/83 (55.42%), Postives = 61/83 (73.49%), Query Frame = 1 Query: 1 GLDVPEGECWMRSGGEQREWRNGEALILDTSFEHETRNNATTAARYVMIVDFWHPQLTSPEQEALAFVYDLRNRYDSGLVPTR 249 GL VPEG CW++ G E+R W + LDTSFEH T N T + R+V+I+DFWHP+L+ E++ALAFVYDLRN+++ G VP R Sbjct: 17 GLKVPEG-CWIQVGDERRSWEVEKLTTLDTSFEHST-GNPTDSDRHVLIIDFWHPELSDAERKALAFVYDLRNKFERGDVPVR 97
BLAST of mRNA_P-wetherbeei_contig1007.8.1 vs. uniprot
Match: A0A7S2Y711_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y711_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.080e-24 Identity = 45/83 (54.22%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 1 GLDVPEGECWMRSGGEQREWRNGEALILDTSFEHETRNNATTAARYVMIVDFWHPQLTSPEQEALAFVYDLRNRYDSGLVPTR 249 GL +PE ECW++ G E+R W G+ LDTSF H T N + R+V+I+DFWHP+LT E+ AL FVYDLRN+++SGL+P R Sbjct: 70 GLRIPE-ECWIQVGDERRSWEEGKLTTLDTSFTHST-GNPSKEDRHVLIIDFWHPELTEAERAALDFVYDLRNKFESGLIPFR 150
BLAST of mRNA_P-wetherbeei_contig1007.8.1 vs. uniprot
Match: A0A7S1VTT1_9STRA (Hypothetical protein n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VTT1_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.780e-24 Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 1 Query: 1 GLDVPEGECWMRSGGEQREWRNGEALILDTSFEHETRNNATTAARYVMIVDFWHPQLTSPEQEALAFVYDLRNRYDSGLVPTR 249 GL +PEG CW++SG E+R W G+ LDTSFEH T N + R+V+I+DFWHP+L+ E+ AL FVYDLRN+++SG +P R Sbjct: 182 GLRIPEG-CWIQSGEERRGWDVGKLTTLDTSFEHSTLNPSADQERHVLIIDFWHPELSEAERAALEFVYDLRNKFESGQIPPR 263
BLAST of mRNA_P-wetherbeei_contig1007.8.1 vs. uniprot
Match: A0A1E7EX96_9STRA (Asp_Arg_Hydrox-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EX96_9STRA) HSP 1 Score: 102 bits (253), Expect = 6.140e-24 Identity = 50/96 (52.08%), Postives = 65/96 (67.71%), Query Frame = 1 Query: 1 GLDVPEGECWMRSGGEQREWRNGEALILDTSFEHETRNNATTAARYVMIVDFWHPQLTSPEQEALAFVYDLRNRYDSGLVPTR----PTVARPAQG 276 GL VP+G CW++ G E++ W + L LDTSF H T N T+ RYV+I+D WH +LT PEQ AL FVYDLRN+++SG VP R P VA+ +G Sbjct: 238 GLQVPDG-CWIQVGNERKSWEKQKLLTLDTSFVHST-GNPTSDDRYVLIIDCWHSELTEPEQAALEFVYDLRNKFESGSVPVRKLKQPVVAKEEEG 331
BLAST of mRNA_P-wetherbeei_contig1007.8.1 vs. uniprot
Match: A0A7S1VX42_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VX42_9STRA) HSP 1 Score: 102 bits (253), Expect = 7.260e-24 Identity = 46/83 (55.42%), Postives = 61/83 (73.49%), Query Frame = 1 Query: 1 GLDVPEGECWMRSGGEQREWRNGEALILDTSFEHETRNNATTAARYVMIVDFWHPQLTSPEQEALAFVYDLRNRYDSGLVPTR 249 GL VPEG CW++ G E++ W G+ LDTSFEH T N T + R+V+I+DFWHP+LTS E+ AL FVYDLRN+++ G +P R Sbjct: 249 GLKVPEG-CWIQVGDERKSWSEGKLTTLDTSFEHST-GNPTDSDRHVLIIDFWHPELTSAERAALEFVYDLRNKFEKGKIPFR 329
BLAST of mRNA_P-wetherbeei_contig1007.8.1 vs. uniprot
Match: A0A7S3VEB5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VEB5_9STRA) HSP 1 Score: 100 bits (250), Expect = 1.480e-23 Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 1 Query: 1 GLDVPEGECWMRSGGEQREWRNGEALILDTSFEHETRNNATTAARYVMIVDFWHPQLTSPEQEALAFVYDLRNRYDSGLVPTR 249 GL +P+G CWM+SG E++ W+ G+ LDTSFEH T N T R+V+I+D+WHP LT E+ AL FVYDLRN+++SG +P R Sbjct: 232 GLKIPDG-CWMKSGDEEQTWQEGKLTTLDTSFEHST-GNPTDDDRHVLIIDYWHPDLTIAERAALEFVYDLRNKFESGNIPFR 312
BLAST of mRNA_P-wetherbeei_contig1007.8.1 vs. uniprot
Match: A0A7S2LMR1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LMR1_9STRA) HSP 1 Score: 101 bits (251), Expect = 2.140e-23 Identity = 46/83 (55.42%), Postives = 61/83 (73.49%), Query Frame = 1 Query: 1 GLDVPEGECWMRSGGEQREWRNGEALILDTSFEHETRNNATTAARYVMIVDFWHPQLTSPEQEALAFVYDLRNRYDSGLVPTR 249 GL VPEG W++ GGE R W G+ I+DTSFEH T N T + R+V+I+DFWHP LT+ E+ L F+Y+LRN+++SGLVP R Sbjct: 299 GLQVPEG-VWVKVGGETRSWTEGKLTIMDTSFEHST-GNPTDSDRHVLIIDFWHPDLTAGERACLNFIYELRNKFESGLVPYR 379
BLAST of mRNA_P-wetherbeei_contig1007.8.1 vs. uniprot
Match: A0A7R9ZQ63_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZQ63_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 4.250e-23 Identity = 46/91 (50.55%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 1 GLDVPEGECWMRSGGEQREWRNGEALILDTSFEHETRNNATTAARYVMIVDFWHPQLTSPEQEALAFVYDLRNRYDSGLVPTRPTVARPAQ 273 G+ +P+ +CWM GGE+R W G+ +DTSF H T N T R+V+I+D+WHP+LT E AL FVYDLRN+++SGLVP R + AQ Sbjct: 235 GVKIPK-DCWMEVGGERRGWEEGKLTTIDTSFTHST-GNPTEEDRHVLIIDYWHPELTQAETAALEFVYDLRNKFESGLVPFRQPRSLQAQ 323 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1007.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1007.8.1 >prot_P-wetherbeei_contig1007.8.1 ID=prot_P-wetherbeei_contig1007.8.1|Name=mRNA_P-wetherbeei_contig1007.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=82bp MRSGGEQREWRNGEALILDTSFEHETRNNATTAARYVMIVDFWHPQLTSPback to top mRNA from alignment at P-wetherbeei_contig1007:7650..7925- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1007.8.1 ID=mRNA_P-wetherbeei_contig1007.8.1|Name=mRNA_P-wetherbeei_contig1007.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=276bp|location=Sequence derived from alignment at P-wetherbeei_contig1007:7650..7925- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1007:7650..7925- >mRNA_P-wetherbeei_contig1007.8.1 ID=mRNA_P-wetherbeei_contig1007.8.1|Name=mRNA_P-wetherbeei_contig1007.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=246bp|location=Sequence derived from alignment at P-wetherbeei_contig1007:7650..7925- (Phaeothamnion wetherbeei SAG_119_79)back to top |