mRNA_P-wetherbeei_contig1007.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1007.2.1
Unique NamemRNA_P-wetherbeei_contig1007.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig1007.2.1 vs. uniprot
Match: A0A7S3RBI3_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3RBI3_9SPIT)

HSP 1 Score: 253 bits (646), Expect = 1.470e-79
Identity = 126/155 (81.29%), Postives = 134/155 (86.45%), Query Frame = 2 
Query:  719 TLAAMAAANQLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVIAGPASSPYEHGIFKLELFLPADYPMAPPKVRFLTKVYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPEPDDPLANDVAETWKTNIDLAKANARQWTQQYA 1183
            +L  MA A+ LPRRIVKETQRLL+EP PGISATPY DNLRYFNV+I GP  SPYE GIFKLELFLP +YPMAPPKVRFLTK++HPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP PDDPLANDVAE WK N   A   A+ WTQQYA
Sbjct:    2 SLFLMADASALPRRIVKETQRLLSEPAPGISATPYTDNLRYFNVIIQGPQGSPYEGGIFKLELFLPEEYPMAPPKVRFLTKMFHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKRNEPKALEEAKTWTQQYA 156
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BLAST of mRNA_P-wetherbeei_contig1007.2.1 vs. uniprot
Match: H3G9K8_PHYRM (UBC core domain-containing protein n=24 Tax=Oomycota TaxID=4762 RepID=H3G9K8_PHYRM)

HSP 1 Score: 253 bits (645), Expect = 1.480e-79
Identity = 125/148 (84.46%), Postives = 135/148 (91.22%), Query Frame = 2 
Query:  740 ANQLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVIAGPASSPYEHGIFKLELFLPADYPMAPPKVRFLTKVYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPEPDDPLANDVAETWKTNIDLAKANARQWTQQYA 1183
            A+ LPRRIVKETQRLLAEPV GISATPYEDNLRYF VVIAGP SSPYE+GIFKLELFLP+DYPMAPPKVRFLT++YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP PDDPLANDVA+ WKT+   A   A +WT++YA
Sbjct:    2 ASALPRRIVKETQRLLAEPVAGISATPYEDNLRYFQVVIAGPQSSPYENGIFKLELFLPSDYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVADHWKTDEAGAVQMAAEWTRRYA 149
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BLAST of mRNA_P-wetherbeei_contig1007.2.1 vs. uniprot
Match: A0A024GCI7_9STRA (UBC core domain-containing protein n=3 Tax=Oomycota TaxID=4762 RepID=A0A024GCI7_9STRA)

HSP 1 Score: 252 bits (644), Expect = 2.320e-79
Identity = 124/148 (83.78%), Postives = 135/148 (91.22%), Query Frame = 2 
Query:  740 ANQLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVIAGPASSPYEHGIFKLELFLPADYPMAPPKVRFLTKVYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPEPDDPLANDVAETWKTNIDLAKANARQWTQQYA 1183
            A+ LPRRIVKETQRLLAEPVPGISATPYEDNLRYF VVIAGP +SPYE+GIFKLELFLPADYPM+PPKVRFLT++YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP PDDPLANDVAE WK++   A   A  WT+++A
Sbjct:    5 ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFQVVIAGPQTSPYENGIFKLELFLPADYPMSPPKVRFLTRLYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKSDEAGAVRTAADWTRRFA 152
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BLAST of mRNA_P-wetherbeei_contig1007.2.1 vs. uniprot
Match: A0A484ED03_BRELC (UBC core domain-containing protein n=13 Tax=Oomycota TaxID=4762 RepID=A0A484ED03_BRELC)

HSP 1 Score: 252 bits (643), Expect = 2.960e-79
Identity = 125/148 (84.46%), Postives = 133/148 (89.86%), Query Frame = 2 
Query:  740 ANQLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVIAGPASSPYEHGIFKLELFLPADYPMAPPKVRFLTKVYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPEPDDPLANDVAETWKTNIDLAKANARQWTQQYA 1183
            A  LPRRIVKETQRLLAEPV GISATPYEDNLRYF VVIAGP SSPYE+GIFKLELFLP DYPMAPPKVRFLT++YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP PDDPLANDVA+ WKT+   A   A +WT++YA
Sbjct:    2 ATTLPRRIVKETQRLLAEPVAGISATPYEDNLRYFQVVIAGPQSSPYENGIFKLELFLPVDYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVADHWKTDEVGAVHTAAEWTRRYA 149
[Close]
BLAST of mRNA_P-wetherbeei_contig1007.2.1 vs. uniprot
Match: K8YVJ5_NANGC (Ubiquitin-conjugating enzyme E2 N n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVJ5_NANGC)

HSP 1 Score: 252 bits (643), Expect = 3.170e-79
Identity = 122/145 (84.14%), Postives = 131/145 (90.34%), Query Frame = 2 
Query:  749 LPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVIAGPASSPYEHGIFKLELFLPADYPMAPPKVRFLTKVYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPEPDDPLANDVAETWKTNIDLAKANARQWTQQYA 1183
            LPRRIVKETQRL++EPVPGISATPYEDN RYFNVVI GP SSPY+ GIFKLELFLPADYPMAPPKVRFLTK+YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLS P P+DPL N VAE WK + D A ANA++WT+ YA
Sbjct:    5 LPRRIVKETQRLISEPVPGISATPYEDNFRYFNVVIEGPESSPYQQGIFKLELFLPADYPMAPPKVRFLTKMYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSCPNPEDPLNNQVAELWKADEDRAIANAKEWTRLYA 149
[Close]
BLAST of mRNA_P-wetherbeei_contig1007.2.1 vs. uniprot
Match: A0A7S2FBQ7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FBQ7_9STRA)

HSP 1 Score: 251 bits (642), Expect = 4.950e-79
Identity = 123/154 (79.87%), Postives = 137/154 (88.96%), Query Frame = 2 
Query:  731 MAAANQ-LPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVIAGPASSPYEHGIFKLELFLPADYPMAPPKVRFLTKVYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPEPDDPLANDVAETWKTNIDLAKANARQWTQQYAMS 1189
            MAAA+  LPRRIVKETQRL+AEPVPGISATPYEDNLRYFN+ +AGPA SP+E G+F+LELFLPADYPMAPPKVRFLTK+YHPN+DKLGRICL+ILKDKWSPALQIRTVLLSIQALLSAP PDDPL N VA+ WK +   A A A +WTQQYA +
Sbjct:    1 MAAADGGLPRRIVKETQRLMAEPVPGISATPYEDNLRYFNIALAGPADSPFESGVFRLELFLPADYPMAPPKVRFLTKIYHPNVDKLGRICLNILKDKWSPALQIRTVLLSIQALLSAPNPDDPLDNGVADVWKNDEATALATAAEWTQQYAQA 154
[Close]
BLAST of mRNA_P-wetherbeei_contig1007.2.1 vs. uniprot
Match: D8LS01_ECTSI (UBC core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS01_ECTSI)

HSP 1 Score: 251 bits (642), Expect = 9.720e-79
Identity = 123/133 (92.48%), Postives = 126/133 (94.74%), Query Frame = 2 
Query:  737 AANQLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVIAGPASSPYEHGIFKLELFLPADYPMAPPKVRFLTKVYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPEPDDPLANDVAETWKTN 1135
            AA+ LPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVI GP  SPYEHG FKLELFLP+DYPMAPPKVRFLTK+YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAP PDDPLANDVAE WKTN
Sbjct:    2 AASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYEHGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEMWKTN 134
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BLAST of mRNA_P-wetherbeei_contig1007.2.1 vs. uniprot
Match: A0A7S4B500_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B500_CHRCT)

HSP 1 Score: 250 bits (638), Expect = 2.770e-78
Identity = 120/153 (78.43%), Postives = 137/153 (89.54%), Query Frame = 2 
Query:  725 AAMAAANQLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVIAGPASSPYEHGIFKLELFLPADYPMAPPKVRFLTKVYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPEPDDPLANDVAETWKTNIDLAKANARQWTQQYA 1183
            A M+  + LPRRI+KETQRLL EPVPGISA+PY+DNLRYFNV+IAGP+SSPYE GIFKLELFLP +YPMAPPKVRF+T++YHPNID++GRICLDILKDKWSPALQIRTVLLSIQALLSAP PDDPLANDVAE WK +   A   AR+WT++YA
Sbjct:    9 AGMSDESLLPRRIIKETQRLLTEPVPGISASPYKDNLRYFNVIIAGPSSSPYEGGIFKLELFLPEEYPMAPPKVRFMTRMYHPNIDRIGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKVDEPAAIQTAREWTKKYA 161
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BLAST of mRNA_P-wetherbeei_contig1007.2.1 vs. uniprot
Match: A0A7S2WD25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WD25_9STRA)

HSP 1 Score: 249 bits (636), Expect = 5.340e-78
Identity = 120/146 (82.19%), Postives = 128/146 (87.67%), Query Frame = 2 
Query:  749 LPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVIAGPASSPYEHGIFKLELFLPADYPMAPPKVRFLTKVYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPEPDDPLANDVAETWKTNIDLAKANARQWTQQYAM 1186
            LPRRI KETQRL+AEPVPGISATPYEDNLRYFNV IAGP  SPY HG FKLELFLPADYPMAPPKVRFLTK+YHPN+DKLGRICL+ILKDKWSPALQIRTVLLSIQ LLSAP PDDPL N VAE WK++   A   ARQWT ++AM
Sbjct:   18 LPRRITKETQRLMAEPVPGISATPYEDNLRYFNVAIAGPDDSPYMHGTFKLELFLPADYPMAPPKVRFLTKIYHPNVDKLGRICLNILKDKWSPALQIRTVLLSIQGLLSAPNPDDPLDNGVAEVWKSDEQAAMDTARQWTAEFAM 163
[Close]
BLAST of mRNA_P-wetherbeei_contig1007.2.1 vs. uniprot
Match: A0A7S0LHS8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHS8_9EUKA)

HSP 1 Score: 248 bits (632), Expect = 2.690e-77
Identity = 120/151 (79.47%), Postives = 135/151 (89.40%), Query Frame = 2 
Query:  731 MAAANQLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVIAGPASSPYEHGIFKLELFLPADYPMAPPKVRFLTKVYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPEPDDPLANDVAETWKTNIDLAKANARQWTQQYA 1183
            M+ A+ LPRRI+KETQRLL+EPV GISATPY+DNLR+FNV+I+GP SSPYE GIFKLELFLP +YPMAPPKVRF+TK+YHPNID+LGRICLDILKDKWSPALQIRTVLLSIQALLSAP PDDPLANDVAE WK +   A   A++WTQ YA
Sbjct:   10 MSDADLLPRRIIKETQRLLSEPVTGISATPYQDNLRHFNVIISGPGSSPYEGGIFKLELFLPEEYPMAPPKVRFMTKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKRDEPEAIKTAKEWTQHYA 160
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1007.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3RBI3_9SPIT1.470e-7981.29Hypothetical protein (Fragment) n=2 Tax=Choreotric... [more]
H3G9K8_PHYRM1.480e-7984.46UBC core domain-containing protein n=24 Tax=Oomyco... [more]
A0A024GCI7_9STRA2.320e-7983.78UBC core domain-containing protein n=3 Tax=Oomycot... [more]
A0A484ED03_BRELC2.960e-7984.46UBC core domain-containing protein n=13 Tax=Oomyco... [more]
K8YVJ5_NANGC3.170e-7984.14Ubiquitin-conjugating enzyme E2 N n=3 Tax=Monodops... [more]
A0A7S2FBQ7_9STRA4.950e-7979.87Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
D8LS01_ECTSI9.720e-7992.48UBC core domain-containing protein n=1 Tax=Ectocar... [more]
A0A7S4B500_CHRCT2.770e-7878.43Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
A0A7S2WD25_9STRA5.340e-7882.19Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0LHS8_9EUKA2.690e-7779.47Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1007contigP-wetherbeei_contig1007:888..2728 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog157072.XP_008871705.1
Preferred nameUBE2N
PFAMsUQ_con
Model size1413
Max annot lvl2759|Eukaryota
KEGG koko:K10580
KEGG Pathwayko04120,ko04624,map04120,map04624
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000165,GO:0000187,GO:0000209,GO:0000724,GO:0000725,GO:0000726,GO:0000729,GO:0000902,GO:0000904,GO:0001650,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002253,GO:0002376,GO:0002429,GO:0002682,GO:0002684,GO:0002753,GO:0002757,GO:0002758,GO:0002764,GO:0002768,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006301,GO:0006302,GO:0006303,GO:0006310,GO:0006325,GO:0006355,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006513,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007254,GO:0007275,GO:0007346,GO:0007399,GO:0007409,GO:0007412,GO:0007416,GO:0007528,GO:0007610,GO:0007625,GO:0007626,GO:0007629,GO:0007630,GO:0008104,GO:0008150,GO:0008152,GO:0008344,GO:0008594,GO:0009056,GO:0009057,GO:0009314,GO:0009411,GO:0009416,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009653,GO:0009794,GO:0009888,GO:0009889,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010015,GO:0010033,GO:0010035,GO:0010038,GO:0010039,GO:0010053,GO:0010468,GO:0010556,GO:0010562,GO:0010604,GO:0010638,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010992,GO:0010994,GO:0016043,GO:0016310,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0016740,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019899,GO:0019941,GO:0021700,GO:0022008,GO:0022607,GO:0022622,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030154,GO:0030163,GO:0030182,GO:0030522,GO:0030534,GO:0031056,GO:0031058,GO:0031098,GO:0031175,GO:0031323,GO:0031325,GO:0031326,GO:0031347,GO:0031349,GO:0031371,GO:0031372,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031624,GO:0031625,GO:0031974,GO:0031981,GO:0032147,GO:0032182,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032872,GO:0032874,GO:0032879,GO:0032880,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033182,GO:0033365,GO:0033554,GO:0033674,GO:0034097,GO:0034613,GO:0034622,GO:0034641,GO:0034644,GO:0035370,GO:0035556,GO:0035872,GO:0036211,GO:0040007,GO:0040019,GO:0042221,GO:0042325,GO:0042327,GO:0042461,GO:0042493,GO:0042592,GO:0042742,GO:0043085,GO:0043122,GO:0043123,GO:0043130,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043549,GO:0043632,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044390,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0045088,GO:0045089,GO:0045739,GO:0045787,GO:0045859,GO:0045860,GO:0045931,GO:0045935,GO:0045937,GO:0045977,GO:0045995,GO:0046328,GO:0046330,GO:0046483,GO:0046530,GO:0046686,GO:0048364,GO:0048468,GO:0048471,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048589,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050808,GO:0050851,GO:0050852,GO:0050896,GO:0051052,GO:0051054,GO:0051090,GO:0051091,GO:0051092,GO:0051094,GO:0051124,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051258,GO:0051276,GO:0051338,GO:0051347,GO:0051403,GO:0051438,GO:0051443,GO:0051603,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0060074,GO:0060255,GO:0060341,GO:0061057,GO:0061564,GO:0061630,GO:0061631,GO:0061650,GO:0061659,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070302,GO:0070304,GO:0070423,GO:0070498,GO:0070534,GO:0070555,GO:0070647,GO:0070727,GO:0070887,GO:0070914,GO:0071214,GO:0071310,GO:0071345,GO:0071347,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0072347,GO:0072665,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090558,GO:0090627,GO:0098542,GO:0099402,GO:0104004,GO:0120036,GO:0120039,GO:0120113,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1902275,GO:1902494,GO:1902531,GO:1902533,GO:1902914,GO:1902916,GO:1903320,GO:1903322,GO:1903506,GO:1903827,GO:1905269,GO:1905392,GO:1990234,GO:2000008,GO:2000026,GO:2000112,GO:2001020,GO:2001022,GO:2001141,GO:2001252
Exons3
Evalue3.7e-89
EggNOG OGsCOG5078@1|root,KOG0417@2759|Eukaryota
Ec32 ortholog descriptionUbiquitin-conjugating enzyme/RWD-like
Ec32 orthologEc-08_001540.1
EC2.3.2.23
Descriptionprotein modification by small protein conjugation
Cds size462
COG categoryO
BRITEko00000,ko00001,ko01000,ko03400,ko04121
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185853.075955-UTR-P-wetherbeei_contig1007:887..9641683185853.075955-UTR-P-wetherbeei_contig1007:887..964Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1007 888..964 +
1683185853.0901039-UTR-P-wetherbeei_contig1007:1088..17411683185853.0901039-UTR-P-wetherbeei_contig1007:1088..1741Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1007 1089..1741 +
1683185853.121281-UTR-P-wetherbeei_contig1007:2507..27281683185853.121281-UTR-P-wetherbeei_contig1007:2507..2728Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1007 2508..2728 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185853.1012516-CDS-P-wetherbeei_contig1007:1741..20771683185853.1012516-CDS-P-wetherbeei_contig1007:1741..2077Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1007 1742..2077 +
1683185853.112047-CDS-P-wetherbeei_contig1007:2381..25071683185853.112047-CDS-P-wetherbeei_contig1007:2381..2507Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1007 2382..2507 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1007.2.1prot_P-wetherbeei_contig1007.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1007 1742..2507 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1007.2.1

>prot_P-wetherbeei_contig1007.2.1 ID=prot_P-wetherbeei_contig1007.2.1|Name=mRNA_P-wetherbeei_contig1007.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=154bp
MAAANQLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVIAGPASSPY
EHGIFKLELFLPADYPMAPPKVRFLTKVYHPNIDKLGRICLDILKDKWSP
ALQIRTVLLSIQALLSAPEPDDPLANDVAETWKTNIDLAKANARQWTQQY
AMS*
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mRNA from alignment at P-wetherbeei_contig1007:888..2728+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1007.2.1 ID=mRNA_P-wetherbeei_contig1007.2.1|Name=mRNA_P-wetherbeei_contig1007.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1841bp|location=Sequence derived from alignment at P-wetherbeei_contig1007:888..2728+ (Phaeothamnion wetherbeei SAG_119_79)
CTGAATCTACCATGTAAATGCAGGGCGTGTCGACCCCTGCGCACCGAACC
TTGACATGGCACCGCACCTCCTACGAGGTGGAACGAATATCACATCACTG
AGCGTGGGTAAACAGCACGTTCAAGCAGTGTTAACGGATCCTTTTTTCCA
TCAAAGGTGCACTTACACAACCGGCAAAACGAGGACTCATCTAACCTGGA
GAGTCCTTGCTTTCGTCAACTTCTGGTCCAGCGCTGGCAGCCTGCTCACA
TTTTGAAAGCGAAAACGTCAGGATGGCGTCAACCTGAGCCGTGTATTGCC
CAGCGAAGCCGTTCTTTGCATCTACGTGAGGGCCGTACCGATATTTTTTG
GGGAAGCGCTCCTTCACGACGGCAGGCCTGCCGCAAAACTCCGTTGCGAA
GACCCTAGCTTCCGCCCCCTGGCTCAGCAGCTCGAGCCGATCGTTTGCCA
TCATCCAGTTTCTTTTGTCTTCTTTCTGGAGCGCGGCGGAAAAGTTGTCT
AGGATCAAAAACTAGCGCTTCCACTTTTGTACGCGTCCCTCACCCGCTTT
GAGGTACAGTGTAGCAGCATCCCTCCACATTTGCTCCAATGTCTCGCATT
TCCCCGTTCTCTTCTGCGATCATCTAGCTTTCGGACACTCGTAAGAGTGG
GAGAGGTTGGAGGCCGCGGCAGTGTGGCGCCTCTGTGGCTTGCAAGCACG
TACAAACATTTGTCTCGCTATTCTTTTCTCTTGCTGCTTTCATAGCCGCC
AGCTTCTCAGCGTCTTCGAAGGAGGGAGGGCGACCGCATTCTCGCGTTTC
CCTCTAGGCGCTTGCGTTAGCCGACGCCGTAAGCTTGCCCATACATTGGC
GGCCATGGCGGCAGCCAACCAACTGCCACGGCGCATCGTGAAGGAGACGC
AACGGCTCCTCGCAGAACCCGTGCCGGGCATTAGCGCAACTCCCTACGAA
GACAACCTGCGTTACTTCAACGTCGTCATCGCCGGGCCGGCCTCGTCGCC
GTACGAGCATGGAATCTTCAAGCTGGAGCTGTTTTTGCCGGCAGATTACC
CAATGGCGCCGCCAAAAGTGCGGTTTCTGACAAAGGTGTACCACCCCAAT
ATCGACAAGCTGGGCCGAATTTGCCTCGACATTCTCAAGGACAAGTGGTC
GCCGGCATTGCAGATTCGAACGGTTTTGCTGAGCATACAGGTGAGCATGG
CGAGGGGGCTTGCAAGTCAAAAATCTATTGGGGTTTGCTTTGACAACTGA
CAAGCAACATTTAGAAAGCACTACGATAGCAGCGAACAAGGCGAAAATAG
ATTGTATGGCTGGATATCCACATTTCAAAAAGCTTCTAACGAGCTTTTTT
GGCTTGCAATCACCATCCTACAAGTTACTAGCCTCTGCCACACTCTAACC
GGCTGATGTCTGAAGCCATCCCTACTTGTATTGAGCGCCTCGCGTCTCTT
CCGTCTCTCCCATTGCATTGCTCCCCGCACTTCTCATCGTGCAGGCGCTG
CTGTCGGCGCCGGAACCGGATGACCCGTTGGCCAACGACGTCGCCGAGAC
GTGGAAGACCAACATAGACCTGGCGAAGGCCAACGCACGCCAGTGGACGC
AGCAATACGCCATGTCGTGACTTCGGCCCGCCCGTCGCCGACGGCGGCGG
CAGCGGCGGCCGGCCCGGCGGCGGCGGCGGCGGCAGCCGGTGGCGGGCAT
GTCGTCAGTCCTTCTCGGCCGGCGGCAGCGGTATCCTTCGCACGCCATCG
CCCAGGGCGGCGGTGCGGATGGCGGCAGCGGCGGCGGCCGTAGCGGCGGC
TGCGACGGCTTCGGCTGCGGTGATTGGCAGCGACGGCAGCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1007:888..2728+

>mRNA_P-wetherbeei_contig1007.2.1 ID=mRNA_P-wetherbeei_contig1007.2.1|Name=mRNA_P-wetherbeei_contig1007.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=462bp|location=Sequence derived from alignment at P-wetherbeei_contig1007:888..2728+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGGCAGCCAACCAACTGCCACGGCGCATCGTGAAGGAGACGCAACG
GCTCCTCGCAGAACCCGTGCCGGGCATTAGCGCAACTCCCTACGAAGACA
ACCTGCGTTACTTCAACGTCGTCATCGCCGGGCCGGCCTCGTCGCCGTAC
GAGCATGGAATCTTCAAGCTGGAGCTGTTTTTGCCGGCAGATTACCCAAT
GGCGCCGCCAAAAGTGCGGTTTCTGACAAAGGTGTACCACCCCAATATCG
ACAAGCTGGGCCGAATTTGCCTCGACATTCTCAAGGACAAGTGGTCGCCG
GCATTGCAGATTCGAACGGTTTTGCTGAGCATACAGGCGCTGCTGTCGGC
GCCGGAACCGGATGACCCGTTGGCCAACGACGTCGCCGAGACGTGGAAGA
CCAACATAGACCTGGCGAAGGCCAACGCACGCCAGTGGACGCAGCAATAC
GCCATGTCGTGA
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