mRNA_P-wetherbeei_contig10060.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig10060.1.1
Unique NamemRNA_P-wetherbeei_contig10060.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig10060.1.1 vs. uniprot
Match: A0A835YK05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK05_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.520e-72
Identity = 130/256 (50.78%), Postives = 176/256 (68.75%), Query Frame = 1
Query:    1 FSFYDADNSNSIDASELQAILRAMGQDPNRKELRAIMRRADADKNGVLQ-------------------------FDEFQSAVMPFLMEKVTGKQMTMAELRSIFDAVDSNRSGRVSHAEFRFMFCKKLQVLTEAEAAALVSVLDRDGDGAVSWDEFMALFDLIEDPDPAAVGAAMLHPDVRGIVSVALKKLKLGARADPEDQLVAFMGMPSTYRRSILAPLDRLKQYSLQQLLVPQLDNRGSVHLLDMEVRVTTTV 693
            FSFYD DNSNSID  E+++ILRA+G DP RKELRA+MR AD D+NGVLQ                         F+EFQ AVMP+++EK++  ++T  E+R++F+A+D++ S  ++  EFRF F +KLQVL   EA ALVS+ DRD +G +SW+EF  LF L+ED D A  G  ++ P++R IV  AL KL +G+R DPE+ L+AFMGMPS +R+S+L PLD +  + LQ LL P+LD+RG + L DM V+VTTTV
Sbjct:  450 FSFYDVDNSNSIDVREVESILRALGHDPTRKELRAVMRSADRDRNGVLQEMLICNXXXXXXXXXXXXXXXXXXQFEEFQEAVMPYVLEKMSNVRLTEVEIRAMFEAIDTDHSSTITRDEFRFAFVEKLQVLNLEEADALVSLCDRDANGTISWEEFAELFKLVEDGDYA--GGQLIKPELRDIVKAALLKLSMGSRPDPEEHLMAFMGMPSNFRKSVLCPLDNIPDFQLQSLLTPRLDSRGGLALPDMCVKVTTTV 703          
BLAST of mRNA_P-wetherbeei_contig10060.1.1 vs. uniprot
Match: D7FUN7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUN7_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 5.840e-72
Identity = 122/235 (51.91%), Postives = 177/235 (75.32%), Query Frame = 1
Query:    1 FSFYDADNSNSIDASELQAILRAMGQDPNRKELRAIMRRADADKNGVLQFDEFQSAVMPFLMEKVTGKQMTMAELRSIFDAVDSNRSGRVSHAEFRFMFCKKLQVLTEAEAAALVSVLDRDGDGAVSWDEFMALFDLIEDPDPAAVGAAMLHPDVRGIVSVALKKLKLGARADPEDQLVAFMGMPSTYRRSILAPLDRLKQYSLQQLLVPQLDNRGSVHLLDMEVRVTTTVTTIE 705
            F+FYD DNSNSIDA+E+ +ILRA+G DP R E RA++R+A+ D+NG ++FD FQ AVMPFL+E+   K++T  E+R++FD +D+NRSG +   EF ++FC KL++L+  EA AL+ +LDR   G VSW EF+ LF+L+ D +  + G A L  D++ +V+VAL+KL++GA  D E QL +F+GMPS+ R+S+LAPLD +K+ SLQ +L+P+LD+RG + L DM V+VTT V  +E
Sbjct:  984 FAFYDQDNSNSIDATEVVSILRALGHDPTRGESRALLRKANVDRNGGVEFDGFQEAVMPFLLERTKSKKLTEGEMRAMFDEIDTNRSGSIKRKEFSYLFCSKLRLLSHEEAEALLGILDRHQSGQVSWVEFVKLFELVGD-ETGSGGIAALPADMKEVVAVALRKLQMGAMPDVEGQLSSFLGMPSSCRKSVLAPLDNIKELSLQWVLMPKLDSRGCIQLQDMSVKVTTEVAEVE 1217          
BLAST of mRNA_P-wetherbeei_contig10060.1.1 vs. uniprot
Match: A0A7S3XMQ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMQ6_HETAK)

HSP 1 Score: 175 bits (443), Expect = 1.730e-46
Identity = 94/227 (41.41%), Postives = 144/227 (63.44%), Query Frame = 1
Query:    1 FSFYDADNSNSIDASELQAILRAMGQDPNRKELRAIMRRADADKNGVLQFDEFQSAVMPFLMEKVTGKQMTMAELRSIFDAVDSNRSGRVSHAEFRFMFCKKLQVLTEAEAAALVSVLDRDGDGAVSWDEFMALFDLIEDPDPAAVGAAMLHPDVRGIVSVALKKLKLGARADPEDQLVAFMGMPSTYRRSILAPLDRLKQYSLQQLLVPQLDNRGSVHLLDMEVRV 681
            F+++DAD +  IDA EL  ILRAMG+DP++K+++ I++ AD DKN  L F+EFQSA +P+L+E++ G +MT +EL++ FDA D N  G++SH EF   F   L++LT  EAA L+  +DR+        EF+ LF LIE           L   +  + + AL+KL  GA  DP++ ++AFMGMPS +R S+LAP+ R  +++L + L    D+     + DM+V++
Sbjct:  526 FNWFDADGNGRIDADELGTILRAMGKDPSKKQVKGILKAADIDKNNYLSFEEFQSAALPYLLEEMQGSKMTESELKTFFDASDFNGDGQISHEEFTGFFVDTLRILTSDEAATLLRWVDRNXXXXXXXXEFLDLFSLIE----RLKKDQELEQSMDPVFASALRKLDHGAMPDPKEHILAFMGMPSGFRPSVLAPVGRTTKHTLAKALEVTADSTHGFTVKDMDVKL 748          
BLAST of mRNA_P-wetherbeei_contig10060.1.1 vs. uniprot
Match: A0A7S1XK06_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XK06_9STRA)

HSP 1 Score: 114 bits (284), Expect = 3.260e-25
Identity = 69/217 (31.80%), Postives = 123/217 (56.68%), Query Frame = 1
Query:    1 FSFYDADNSNSIDASELQAILRAMGQDPNRKELRAIMRRADADKNGVLQFDEFQSAVMPFLMEKVTGKQM-TMAELRSIFDAVDSNRSGRVSHAEFRFMFCKKLQVLTEAEAAALVSVLDRDGDGAVSWDEFMALFDLIEDPDPAAVGAAMLHPDVRGIVSVALKKLKLGARADPEDQLVAFMGMPSTYRRSILAPLDRLKQYSLQQLLVPQLDNRG 648
            F ++D D SN+I+ SEL  ILR++GQ    K+L+ ++  A + + GVL FD+F + V PF++  +    M +M +L+  F + D N  G +   EF+  F  + + L+EAE  +L+ ++D + D  ++W EF  +  L+ +   A         +V  +   AL K+++G+  DP++ L  FMG+P T++ S L   +R +  SL+ +L P+ ++ G
Sbjct: 1110 FDYFDEDFSNTINVSELDNILRSVGQVLTEKQLKNLVSAAGS-RRGVLSFDDFYAIVKPFVIRHIHDHSMPSMEDLKYAFYSFDHNGDGTLDENEFKVSFMDQFR-LSEAECESLMDMIDTNRDRTITWMEFRVIAKLVTENLNAD------FVEVTPLARQALTKIRIGSVPDPQEHLQMFMGLPLTFQESFLFNAERAEDRSLESVLKPRFNSTG 1318          
BLAST of mRNA_P-wetherbeei_contig10060.1.1 vs. uniprot
Match: A0A8B8DX23_CRAVI (calmodulin-like protein 12 n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DX23_CRAVI)

HSP 1 Score: 92.4 bits (228), Expect = 4.430e-18
Identity = 53/140 (37.86%), Postives = 80/140 (57.14%), Query Frame = 1
Query:    1 FSFYDADNSNSIDASELQAILRAMGQDPNRKELRAIMRRADADKNGVLQFDEFQSAVMPFLMEKVTGKQMTMAELRSIFDAVDSNRSGRVSHAEFRFMFCKKLQVLTEAEAAALVSVLDRDGDGAVSWDEFMALFDLIED 420
            FS +D DN  SI+  EL  ++RA+GQ+P+  ELRA++   D D NGV+ F+EF   ++     K   K  T  ELR  F   D + +G ++  E +       + L++ E   +++  D DGDG +S++EF ALFDLI D
Sbjct:  161 FSLFDKDNDGSINTKELGTVMRALGQNPSITELRAMVDEVDLDGNGVIDFEEFLEMIV-----KEMKKTDTEEELREAFRIFDRSGNGYINAKELKHGMVFLGERLSDEEVEEMMNEADSDGDGKISFEEFRALFDLIND 295          
BLAST of mRNA_P-wetherbeei_contig10060.1.1 vs. uniprot
Match: W2R0F9_PHYPN (Uncharacterized protein n=9 Tax=Phytophthora parasitica TaxID=4792 RepID=W2R0F9_PHYPN)

HSP 1 Score: 90.5 bits (223), Expect = 4.000e-17
Identity = 76/241 (31.54%), Postives = 117/241 (48.55%), Query Frame = 1
Query:    1 FSFYDADNSNSIDASELQAILRAMGQDPNRKELRAIMRRADADKNGVLQFDEFQSAVMPFLMEK--VTGKQMTMAELRSIFDAVDSNRSGRVSHAEFRFMFCKKLQV-LTEAEAAALVSVLDRDGDGAVSWDEFMALFDLIEDPDPAAVGAAMLHPDVRGIVSV---------ALKKLKLGARADPEDQLVAFMGMPSTYRRSI--LAPLDRLKQYSLQQLLVPQLDNRGSVHLLDMEVRV 681
            F F+D D +++ID  EL  +LRA+G +   KEL A M  AD D+NG L F EF + V   L +K  +  +Q  M E+R  F                 ++  K LQV L+  E AAL+  +D+D DG +S +EF+A    +E  +    G          I S+         A+KKL  GA  D +  L+ F G+PS +R +I   A    LK+ +++ +L     +  ++  L ++ RV
Sbjct:  751 FDFFDLDQTSTIDKRELSHVLRALGHEFTTKELEAEMASADLDRNGQLDFHEFVAFVKKQLAKKTYLLSQQREM-EIRQSFQXXXXXXXXXXXXXXXXYLIYKVLQVELSIEEQAALLDFVDKDADGLISEEEFIAFMKELETLNRKYSGKGGWKKQKEFIESLDGISQLAYSAMKKLVRGAPMDIDRSLLMFFGIPSNFRPAISSAATCRTLKRNTMEHVL--SFPSPQTIEALALDTRV 988          
BLAST of mRNA_P-wetherbeei_contig10060.1.1 vs. uniprot
Match: A0A329S5F4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329S5F4_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 9.620e-17
Identity = 70/204 (34.31%), Postives = 100/204 (49.02%), Query Frame = 1
Query:    1 FSFYDADNSNSIDASELQAILRAMGQDPNRKELRAIMRRADADKNGVLQFDEFQSAVMPFLMEK--VTGKQMTMAELRSIFDAVDSNRSGRVSHAEFRFMFCKKLQV-LTEAEAAALVSVLDRDGDGAVSWDEFMALFDLIEDPDPAAVGAAMLHPDVRGIVSV---------ALKKLKLGARADPEDQLVAFMGMPSTYRRSI 576
            F F+D D +++ID  EL  +LRA+G +   KEL A M  AD D+NG L F EF + V   L +K  +  +Q  M E+R  F                 +M  K LQV L+  E AAL+  +D+D DG +S +EF+A    +E       G        + I S+         A+KKL  GA  D +  L+ F G+PS +R +I
Sbjct:  443 FDFFDLDQTSTIDKRELSHVLRALGHEFTSKELEAEMASADLDRNGQLDFYEFVAFVKKQLAQKTYLLSQQREM-EIRQSFQXXXXXXXXXXXXXXXXYMIYKVLQVELSIEEQAALLDFVDKDADGLISEEEFIAFMKELETLHRKYSGKGGWRKQKQFIDSLDGISQLAYSAMKKLVRGAPMDIDRSLLMFFGIPSNFRPAI 645          
BLAST of mRNA_P-wetherbeei_contig10060.1.1 vs. uniprot
Match: A0A8J5MEK1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MEK1_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 2.290e-16
Identity = 69/204 (33.82%), Postives = 100/204 (49.02%), Query Frame = 1
Query:    1 FSFYDADNSNSIDASELQAILRAMGQDPNRKELRAIMRRADADKNGVLQFDEFQSAVMPFLMEK--VTGKQMTMAELRSIFDAVDSNRSGRVSHAEFRFMFCKKLQV-LTEAEAAALVSVLDRDGDGAVSWDEFMALFDLIEDPDPAAVGAAMLHPDVRGIVSV---------ALKKLKLGARADPEDQLVAFMGMPSTYRRSI 576
            F F+D D +++ID  EL  +LRA+G +   KEL A M  AD D+NG L F EF + V   L +K  +  +Q  M E+R  F                 ++  K LQV L+  E AAL+  +D+D DG +S +EF+A    +E       G        + I S+         A+KKL  GA  D +  L+ F G+PS +R +I
Sbjct:  199 FDFFDLDQTSTIDKRELSHVLRALGHEFTSKELEAEMASADLDRNGQLDFYEFVAFVKKQLAQKTYLLSQQREM-EIRQSFQXXXXXXXXXXXXXXXXYLIYKVLQVELSIEEQAALLDFVDKDADGLISEEEFIAFMKELETLHRKYSGKGGWRKQKQFIDSLDGISQLAYSAMKKLVRGAPMDIDRSLLMFFGIPSNFRPAI 401          
BLAST of mRNA_P-wetherbeei_contig10060.1.1 vs. uniprot
Match: A0A662X2Q4_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2Q4_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.150e-15
Identity = 69/204 (33.82%), Postives = 97/204 (47.55%), Query Frame = 1
Query:    1 FSFYDADNSNSIDASELQAILRAMGQDPNRKELRAIMRRADADKNGVLQFDEFQSAVMPFLMEK--VTGKQMTMAELRSIFDAVDSNRSGRVSHAEFRFMFCKKLQV-LTEAEAAALVSVLDRDGDGAVSWDEFMAL------FDLIEDPDPAAVGAAMLHPDVRG---IVSVALKKLKLGARADPEDQLVAFMGMPSTYRRSI 576
            F F+D D + +ID  EL  +LRA+G +   KEL A M  AD D+NG L F EF + V   L +K  +  +Q  M E+R  F                 ++  K LQV L+  E +AL+   DRD DG +S +EF+A       F L   P             + G   +   A+KKL  GA  D +  L+ F G+PS +R +I
Sbjct:  589 FDFFDLDQTATIDKRELSHVLRALGHEFTSKELEAAMASADLDRNGRLDFYEFVAFVKQQLAQKTFLLSQQREM-EIRQSFXXXXXXXXXXXXXXXXEYLIYKVLQVELSVEEQSALLDFADRDADGLISEEEFIAFMKNMETFHLEHGPRDGGKRQKRFLASLDGSSQLAYSAMKKLVRGAPMDLDRNLLMFFGIPSNFRPAI 791          
BLAST of mRNA_P-wetherbeei_contig10060.1.1 vs. uniprot
Match: D0N776_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N776_PHYIT)

HSP 1 Score: 85.5 bits (210), Expect = 1.830e-15
Identity = 75/241 (31.12%), Postives = 113/241 (46.89%), Query Frame = 1
Query:    1 FSFYDADNSNSIDASELQAILRAMGQDPNRKELRAIMRRADADKNGVLQFDEFQSAVMPFLMEK--VTGKQMTMAELRSIFDAVDSNRSGRVSHAEFRFMFCKKLQV-LTEAEAAALVSVLDRDGDGAVSWDEFMALFDLIEDPDPAAVGAAMLHPDVRGIVSV---------ALKKLKLGARADPEDQLVAFMGMPSTYRRSI--LAPLDRLKQYSLQQLLVPQLDNRGSVHLLDMEVRV 681
            F F+D D +++ID  EL  +LRA+G +   KEL A M   D D+NG L F EF + V   L +K  +  +Q  M E+R  F                     K LQV L+  E AAL+  +D+D DG +S +EF+A    +E       G          I S+         A+KKL  GA  D +  L+ F G+PS +R +I   A    LK+ +++ +L     +  ++  L ++ RV
Sbjct:   83 FDFFDLDQTSTIDKRELSHVLRALGHEFTSKELEAEMASVDLDRNGQLDFHEFVTFVKKQLAQKTYLLSQQREM-EIRQSFXXXXXXXXXXXXXXXXXXXXYKVLQVELSIEEQAALLDFVDKDADGLISEEEFIAFMKELESLQRKNSGKGGWRKQREFIDSLDGISQLAYSAMKKLVRGAPMDIDRSLLMFFGIPSNFRPAISSAATCRTLKRNTMEHVL--SFPSPQTIEALALDTRV 320          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig10060.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YK05_9STRA1.520e-7250.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FUN7_ECTSI5.840e-7251.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3XMQ6_HETAK1.730e-4641.41Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XK06_9STRA3.260e-2531.80Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8B8DX23_CRAVI4.430e-1837.86calmodulin-like protein 12 n=2 Tax=Crassostrea vir... [more]
W2R0F9_PHYPN4.000e-1731.54Uncharacterized protein n=9 Tax=Phytophthora paras... [more]
A0A329S5F4_9STRA9.620e-1734.31Uncharacterized protein n=1 Tax=Phytophthora cacto... [more]
A0A8J5MEK1_9STRA2.290e-1633.82Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A662X2Q4_9STRA1.150e-1533.82Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
D0N776_PHYIT1.830e-1531.12Uncharacterized protein n=1 Tax=Phytophthora infes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig10060contigP-wetherbeei_contig10060:74..2117 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FUN7
Preferred nameMLC2
PFAMsEF-hand_5,EF-hand_6,EF-hand_7,EF-hand_8
Model size711
Max annot lvl2759|Eukaryota
KEGG koko:K02183
KEGG Pathwayko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04070,ko04114,ko04218,ko04261,ko04270,ko04371,ko04626,ko04713,ko04720,ko04722,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05152,ko05167,ko05200,ko05214,ko05418,map04014,map04015,map04016,map04020,map04022,map04024,map04070,map04114,map04218,map04261,map04270,map04371,map04626,map04713,map04720,map04722,map04728,map04740,map04744,map04745,map04750,map04910,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04970,map04971,map05010,map05031,map05034,map05133,map05152,map05167,map05200,map05214,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0000142,GO:0000910,GO:0000916,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005826,GO:0005856,GO:0005933,GO:0005935,GO:0005938,GO:0006996,GO:0007010,GO:0007049,GO:0008092,GO:0008150,GO:0009987,GO:0015629,GO:0016043,GO:0016459,GO:0016460,GO:0017022,GO:0022402,GO:0030029,GO:0030036,GO:0030427,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0031032,GO:0032153,GO:0032155,GO:0032506,GO:0032991,GO:0036213,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044464,GO:0044837,GO:0045159,GO:0051301,GO:0061640,GO:0070938,GO:0071840,GO:0071944,GO:0099568,GO:0110085
Exons5
Evalue9.58e-73
EggNOG OGsCOG5126@1|root,KOG0027@2759|Eukaryota
DescriptionCalcium-binding protein
Cds size708
COG categoryDTZ
BRITEko00000,ko00001,ko01009,ko03036,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185852.5992541-CDS-P-wetherbeei_contig10060:73..2201683185852.5992541-CDS-P-wetherbeei_contig10060:73..220Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10060 74..220 +
1683185852.6090496-CDS-P-wetherbeei_contig10060:558..7231683185852.6090496-CDS-P-wetherbeei_contig10060:558..723Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10060 559..723 +
1683185852.6171904-CDS-P-wetherbeei_contig10060:1015..12281683185852.6171904-CDS-P-wetherbeei_contig10060:1015..1228Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10060 1016..1228 +
1683185852.6253426-CDS-P-wetherbeei_contig10060:1570..17171683185852.6253426-CDS-P-wetherbeei_contig10060:1570..1717Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10060 1571..1717 +
1683185852.6408904-CDS-P-wetherbeei_contig10060:2079..21151683185852.6408904-CDS-P-wetherbeei_contig10060:2079..2115Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig10060 2080..2115 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig10060.1.1prot_P-wetherbeei_contig10060.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig10060 74..2115 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig10060.1.1

>prot_P-wetherbeei_contig10060.1.1 ID=prot_P-wetherbeei_contig10060.1.1|Name=mRNA_P-wetherbeei_contig10060.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=236bp
FSFYDADNSNSIDASELQAILRAMGQDPNRKELRAIMRRADADKNGVLQF
DEFQSAVMPFLMEKVTGKQMTMAELRSIFDAVDSNRSGRVSHAEFRFMFC
KKLQVLTEAEAAALVSVLDRDGDGAVSWDEFMALFDLIEDPDPAAVGAAM
LHPDVRGIVSVALKKLKLGARADPEDQLVAFMGMPSTYRRSILAPLDRLK
QYSLQQLLVPQLDNRGSVHLLDMEVRVTTTVTTIEG
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mRNA from alignment at P-wetherbeei_contig10060:74..2117+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig10060.1.1 ID=mRNA_P-wetherbeei_contig10060.1.1|Name=mRNA_P-wetherbeei_contig10060.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2044bp|location=Sequence derived from alignment at P-wetherbeei_contig10060:74..2117+ (Phaeothamnion wetherbeei SAG_119_79)
TTCAGCTTCTACGACGCCGACAACAGCAACAGCATCGACGCTTCGGAGCT ACAGGCAATCCTGCGCGCCATGGGACAGGACCCCAACCGCAAGGAGCTCC GCGCCATCATGCGGAGAGCCGATGCTGACAAGAACGGCGTCCTCCAGGTT GGTCGGCGGGCGCAGGATCGGTGATGGCATATGGAACCGCAATTTGTATT CCGGCGCTAGGGCAGATAATTCGTTGTACACGGACTGTTTAAGAGACGCA AAACGATGCGCCACTGCACACTTCTTGCGAATGCCAGCCAAGAAGCTGCG AAGTTTATTTTGCCCCAGTAAAAGACTCGCGGCTGGTTCCTGTTTAGTAG CCCGGGCGTCTCACACGCTGGGTCTTCTACTTTTCCGGCTTTTTTCAGTG TAACTTTCCAAGCATTGCCTCTATCTCATACAATCCGTGCCGACCTTTAT CTGCATCATGCGGGTGGGCCTGGGGAGTTGAGCAGTTTGATGAGTTCCAG TCGGCGGTGATGCCATTCTTGATGGAGAAGGTGACGGGCAAGCAGATGAC TATGGCGGAGCTTCGCAGCATCTTTGACGCCGTCGACAGCAACCGCTCCG GCAGGGTCAGCCATGCCGAGTTCCGCTTCATGTTCTGCAAGAAGCTGCAG GTGGAAGGAAGGAAGGATGCGCTTTCTCGTCCGTGCCGTGCTTACGCCGT GTGTGCATTGCTGACCAAATTTGCTCCTCTACTTCTTTTGTTCTATACAA AAGTCTTATTCACGCCTGATGGTTTCTGGTCCCGGCTTTCGAAGGTGTTT ATCCTCCATCCATTGCAACGGCCCAATTCGAGGATTGCTCCGCCACTCTC TATCCCTTGAAGCCATTCACATCAGCCACACGTTTCGTCCCCTTGGATTG ATCTTGCATGTGCCTCATGTGCCTCAATGCACGGCTCGGCAGGTGCTGAC AGAAGCGGAGGCAGCGGCGCTGGTGAGCGTACTGGACCGCGACGGCGACG GCGCCGTGAGCTGGGACGAGTTCATGGCGCTGTTCGACCTGATTGAGGAC CCTGACCCGGCCGCCGTCGGTGCCGCCATGCTCCACCCGGATGTCCGCGG CATAGTCTCCGTCGCCCTCAAGAAGCTGAAGCTCGGCGCCCGCGCCGACC CCGAGGTTAGTCAGCTGCTGCTCGAGCCGGAATCGGCCGCTCTCGTGGGC GTCCTGTTCCCGTTGTGAAGAGAATGAGGATTGACTGGTCGGCGGCATCA TCTACCTTTTATTTAAGGAATCCTGGCGCCAGAAAGCAGAAAGCGTCTGA CGGCGCGCTCTGGAAGCGGCAATGATCTTAGGCGAGGCGTTCCTCGACGT TGGGAGGACAAGGATCGCCAGGCCAGGGTGTCTGTGTCGCCTCATTCTTA AAGCCCCGTGCATGCTGCGTTCCTTTCTTTTGTTTGCCTTGCCTTCCGTC CGCTGCCAACACCGCTCCTTCACGGGCTCGCTTCGCTTTCGCTGCAGGAC CAGCTGGTGGCCTTCATGGGAATGCCGTCGACGTACCGCCGCAGCATCCT GGCGCCGCTCGATCGCCTCAAGCAGTACTCGCTGCAGCAGCTCCTCGTGC CGCAGCTCGACAACCGCGGCTCCGTACACCTCCTCGACATGGAGGTGAGG GGGGCACAACTTAGAGCAGCGTGGTGGTACACAGTCAGGAGCTATATGCC ACAGAGTTTTACTGTGTTTCTCTTCCGTTTCTCTTTTCCCCTCTGTTCCT TTCCTCCTATGTCGGCGTTGTGCGGGGCATGGAGTAAATCGGAGTCTCGA GATCGCTGGTTGACGTGTTTCGCGTTCACTAACGGATTGATGTGCAAGGG AGCGGAAGCTCGGGCATTCTTTTTGCAGGCGAGTAGTCAGGTTGAGTGGT GCTCGGCCGGCCGATCGAACATCCTCGATCGAACATCCTCTCTGGCCTCC CGTCGCCGTCTCAGAGTGAATGCAATTCACTGGCTACTTCTTGGCTGCCT GAACAGGTCCGTGTAACGACGACAGTCACGACGATCGAAGGAAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig10060:74..2117+

>mRNA_P-wetherbeei_contig10060.1.1 ID=mRNA_P-wetherbeei_contig10060.1.1|Name=mRNA_P-wetherbeei_contig10060.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=708bp|location=Sequence derived from alignment at P-wetherbeei_contig10060:74..2117+ (Phaeothamnion wetherbeei SAG_119_79)
TTCAGCTTCTACGACGCCGACAACAGCAACAGCATCGACGCTTCGGAGCT
ACAGGCAATCCTGCGCGCCATGGGACAGGACCCCAACCGCAAGGAGCTCC
GCGCCATCATGCGGAGAGCCGATGCTGACAAGAACGGCGTCCTCCAGTTT
GATGAGTTCCAGTCGGCGGTGATGCCATTCTTGATGGAGAAGGTGACGGG
CAAGCAGATGACTATGGCGGAGCTTCGCAGCATCTTTGACGCCGTCGACA
GCAACCGCTCCGGCAGGGTCAGCCATGCCGAGTTCCGCTTCATGTTCTGC
AAGAAGCTGCAGGTGCTGACAGAAGCGGAGGCAGCGGCGCTGGTGAGCGT
ACTGGACCGCGACGGCGACGGCGCCGTGAGCTGGGACGAGTTCATGGCGC
TGTTCGACCTGATTGAGGACCCTGACCCGGCCGCCGTCGGTGCCGCCATG
CTCCACCCGGATGTCCGCGGCATAGTCTCCGTCGCCCTCAAGAAGCTGAA
GCTCGGCGCCCGCGCCGACCCCGAGGACCAGCTGGTGGCCTTCATGGGAA
TGCCGTCGACGTACCGCCGCAGCATCCTGGCGCCGCTCGATCGCCTCAAG
CAGTACTCGCTGCAGCAGCTCCTCGTGCCGCAGCTCGACAACCGCGGCTC
CGTACACCTCCTCGACATGGAGGTCCGTGTAACGACGACAGTCACGACGA
TCGAAGGA
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