mRNA_P-wetherbeei_contig1006.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1006.2.1 vs. uniprot
Match: A0A835YVZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVZ6_9STRA) HSP 1 Score: 130 bits (326), Expect = 8.450e-30 Identity = 86/172 (50.00%), Postives = 118/172 (68.60%), Query Frame = 1 Query: 52 AVVAAAERRRHE----MRETLVNYKRDELVDHKVQTARLREEMEALAKDRESLESQVDAVRREVAGLEASATEAEGEARSHARHSIIGPDGRVSAAHQRKRRRLEEELEAFLAALDRKKADAAALDDRLRAVEDARHEREDEMKELERSLVEVLVEQQKKLLAALADDHVEN 555 A+VAAAE E MR+ LVNYKR+ LVDHK+Q+ LR ++E L++DRE E++ + + A E A +AE E + H+R S +G DGRVSAAHQR+RRRL+EELE L AL+ ++A+ AA D RL + +AR +E EM+ LER LV VLV+QQK+LL+ L + E+ Sbjct: 1003 ALVAAAEAHSREQRAAMRDALVNYKREVLVDHKLQSEALRRQLEQLSRDREVAENRKSELLKTAAEAERVARDAERELQQHSRQSALGADGRVSAAHQRRRRRLDEELEEALRALEGRRAEVAAADARLAQLGEARIAKEGEMQALERELVGVLVDQQKRLLSILGAERDED 1174
BLAST of mRNA_P-wetherbeei_contig1006.2.1 vs. uniprot
Match: A0A7S3ZZB9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZB9_9STRA) HSP 1 Score: 101 bits (252), Expect = 4.680e-20 Identity = 65/165 (39.39%), Postives = 104/165 (63.03%), Query Frame = 1 Query: 46 LLAVVAAAERRRHEMRETLVNYKRDELVDHKVQTARLREEMEALAKDRESLESQVDAVRREVAGLEASATEAEGEARSHARHSIIGPDGRVSAAHQRKRRRLEEELEAFLAALDRKKADAAALDDRLRAVEDARHEREDEMKELERSLVEVLVEQQKKLLAALAD 540 L A + E R M +TLVN++R LV HK ++ L E+E + +DR+ LE++ D + V ++ S E +H+++S I DGRV+ AH +K++R++++ E L +++++ + D RL+ + DAR +ED+MKELER LVE+LV QQKKLLA L + Sbjct: 1740 LEAQIEEGEAFRGRMHDTLVNHERATLVAHKRRSTELGMELEVIVRDRDELEAERDKILEYVDEMQESVRAIEQAIHAHSKNSAISSDGRVNVAHAKKKKRMDDDHEMLLLGVEKQRNALSETDARLQRLNDARERKEDDMKELERRLVELLVSQQKKLLAILQE 1904
BLAST of mRNA_P-wetherbeei_contig1006.2.1 vs. uniprot
Match: D8LMX2_ECTSI (Plectin isoform 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMX2_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 3.890e-19 Identity = 71/168 (42.26%), Postives = 99/168 (58.93%), Query Frame = 1 Query: 37 VDTLLAVVAAAERRRHEMRETLVNYKRDELVDHKVQTARLREEMEALAKDRESLESQVDAVRREVAGLEASATEAEGEARSHARHSIIGPDGRVSAAHQRKRRRLEEELEAFLAALDRKKADAAALDDRLRAVEDARHEREDEMKELERSLVEVLVEQQKKLLAALAD 540 VD L+ + + RR M+ETLVN+KR+ LE Q ++RE LE A AE EA +H+R S IGPDG + A RK+RRL+EELE L A++ K+ A+D +L + ++R E+E+EMK LER+LV+VLVEQQKKLL+ L++ Sbjct: 2093 VDELMDMAFDSRRRFASMQETLVNHKRE-------------------------LEEQRLLLQREFRELEGQAKNAEKEAHAHSRQSAIGPDGMIIPARARKKRRLDEELEGLLEAMEAKRKALVAVDGKLGGLAESRAEKEEEMKGLERTLVQVLVEQQKKLLSLLSE 2235
BLAST of mRNA_P-wetherbeei_contig1006.2.1 vs. uniprot
Match: A0A7S2G7M7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G7M7_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 1.270e-15 Identity = 58/162 (35.80%), Postives = 96/162 (59.26%), Query Frame = 1 Query: 55 VVAAAERRRHEMRETLVNYKRDELVDHKVQTARLREEMEALAKDRESLESQVDAVRREVAGLEASATEAEGEARSHARHSIIGPDGRVSAAHQRKRRRLEEELEAFLAALDRKKADAAALDDRLRAVEDARHEREDEMKELERSLVEVLVEQQKKLLAALAD 540 V+ E +R +M TLV +KR+EL+++K ++ L +++A+ + + L + + R H++ S I +GRV+ AH RK++RL+EE E L + +K+ D + LD ++ A + R ++ED +K+LER +VEVLV+QQKKLLA L D Sbjct: 10 VIVDFEGKRSQMHATLVEHKREELIENKTKSQSLTAQLDAINLECDGLIRRKNXXXXXXXXXXXXXXXXXXXXRVHSQQSAIS-EGRVNVAHARKKKRLDEEYENLLQIMHKKRDDISVLDKKIAACAERRQDKEDALKDLERQIVEVLVDQQKKLLAILTD 170
BLAST of mRNA_P-wetherbeei_contig1006.2.1 vs. uniprot
Match: A0A7S1BNZ5_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BNZ5_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.340e-15 Identity = 60/180 (33.33%), Postives = 115/180 (63.89%), Query Frame = 1 Query: 10 EERVALLGGVDTLLAVVAAAERRRH--EMRETLVNYKRDELVDHKVQTARLREEMEALAKDRESLESQVDAVRREVAGLEASATEAEGEARSHARHSIIGPDGRVSAAHQRKRRRLEEELEAFLAALDRKKADAAALDDRLRAVEDARHEREDEMKELERSLVEVLVEQQKKLLAALADD 543 EE+ +L + T +A +A E RR EM + L N+KRD+LV + +T R+ E++ ++ +RE + + D ++R++ +E S E E + ++H++ S I GR++ AH +K++RL++E E + ++ K+++ ++ L ++ + + E++MK LERS V+VL+EQQK LL+ L+++ Sbjct: 668 EEKTKMLD-IKTSVAHKSAEEFRRQKAEMYKVLTNHKRDDLVRQRAETVRVATELDTISSERERVNYKFDFLKRQMGSMEDSLKELEEQMQTHSKKSTI-QGGRLNLAHAKKKKRLDDEFEQLIECIELKRSEMNQVEIHLNKLDSKKSDAEEKMKVLERSFVDVLMEQQKCLLSTLSEN 845
BLAST of mRNA_P-wetherbeei_contig1006.2.1 vs. uniprot
Match: A0A662WYL3_9STRA (Carbonic anhydrase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYL3_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.380e-14 Identity = 58/147 (39.46%), Postives = 87/147 (59.18%), Query Frame = 1 Query: 85 EMRETLVNYKRDELVDHKVQTARLREEMEALAKDRESLESQVDAVRREVAGLEASATEAEGEARSHARHSIIGPDGRVSAAHQRKRRRLEEELEAFLAALDRKKADAAALDDRLRAVEDARHEREDEMKELERSLVEVLVEQQKKLL 525 EM +TL NYKRDELV H+ +A L E+ ++K E ++ + RE+A L+A A E R S G ++ A K+RRL EE EA L +++KKA+ +D L ++ R ++E EM+ +ER LVE+LV+QQK++L Sbjct: 1923 EMTQTLTNYKRDELVAHRSASAVLSNEISIVSKQLEEVDEMKATLEREIAALQAEAQAVEAALRDLMLQSSGSNGGALNMAVVAKKRRLNEEFEALLERIEKKKAEVRTVDQTLGSLRARREDKEHEMRVMERKLVEILVQQQKQML 2069
BLAST of mRNA_P-wetherbeei_contig1006.2.1 vs. uniprot
Match: A0A7S3PMA7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PMA7_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.960e-13 Identity = 53/155 (34.19%), Postives = 94/155 (60.65%), Query Frame = 1 Query: 70 ERRRHEMRETLVNYKRDELVDHKVQTARLREEMEALAKDRESLESQVDAVRREVAGLEASATEAEGEARSHARHSIIGPDGRVSAAHQRKRRRLEEELEAFLAALDRKKADAAALDDRLRAVEDARHEREDEMKELERSLVEVLVEQQKKLLAAL 534 E ++ MR+ LVNYKRD L+ HK ++ ++ ++ L++ ++ E + +A + ++ E E + R + S I +GRV+ AH +++R L++ELE L + K+ A +++++ + D +E E+E+K LE LVE+L+EQQKKLL L Sbjct: 33 EETQNTMRDILVNYKRDTLLQHKARSTVIQTDLAKLSEIKQKSEKERNAYLSAILQIDGQIRELERQLRELGKVSAI-QNGRVNVAHAKRKRVLDQELEHVLEKAEMKRDGLAKIEEKISQIGDEANENENELKRLESQLVEILIEQQKKLLGIL 186
BLAST of mRNA_P-wetherbeei_contig1006.2.1 vs. uniprot
Match: A0A7S2SNH8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNH8_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.260e-13 Identity = 61/171 (35.67%), Postives = 96/171 (56.14%), Query Frame = 1 Query: 28 LGGVDTLLAVVAAAERRRHEMRETLVNYKRDELVDHKVQTARLREEMEALAKDRESLESQVDAVRREVAGLEASATEAEGEARSHARHSIIGPDGRVSAAHQRKRRRLEEELEAFLAALDRKKADAAALDDRLRAVEDARHEREDEMKELERSLVEVLVEQQKKLLAALAD 540 LG + L + E+ R EM +TLVN+KR+ L H+ Q+A L++++EA+ +R+ LE++ D + E++ +E S E + R H++ S I +GR++ AH RK++RL+EE E L A++ K+ A LVEVLV+QQKKLL L+D Sbjct: 109 LGDAENL---IDEGEKWRDEMNDTLVNHKREILKQHQSQSASLQKQLEAIGVERDGLETRKDRLLDELSEMEISIKSLETQIREHSQQSAIS-EGRINVAHARKKKRLDEEYEVLLEAVESKRRSLTAXXXXXXXXXXXXXXXXXXXXXXXXXLVEVLVDQQKKLLKILSD 275
BLAST of mRNA_P-wetherbeei_contig1006.2.1 vs. uniprot
Match: A0A2R5GHI1_9STRA (Copine-2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GHI1_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 6.090e-13 Identity = 53/156 (33.97%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 70 ERRRHEMRETLVNYKRDELVDHKVQTARLREEMEALAKDRESLESQVDAVRREVAGLEASATEAEGEARSHARHSIIGPDGRVSAAHQRKRRRLEEELEAFLAALDRKKADAAALDDRLRAVEDARHEREDEMKELERSLVEVLVEQQKKLLAALA 537 E+ R M + LVN+KR++L+ HKV+T ++++++ L RE+LE Q + ++R+V LE ++ S + DG+++ H +++RRL++E E L + ++ A+++R+ AV+ +E++++E+E LV +LVEQQK LLA LA Sbjct: 1528 EKSRRRMHDILVNHKREDLLQHKVETGVIQDDLKKLQHSREALEKQREQLQRDVGYLEGQIRGVXXXXEQLSKVSAV-QDGQINVTHAKRKRRLDQEFEHLLDRVAHQRKQIDAVNERIAAVQKDAELKEEDLREMEAGLVAILVEQQKLLLAELA 1682
BLAST of mRNA_P-wetherbeei_contig1006.2.1 vs. uniprot
Match: W2QVC3_PHYPN (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2QVC3_PHYPN) HSP 1 Score: 77.4 bits (189), Expect = 6.330e-12 Identity = 57/147 (38.78%), Postives = 84/147 (57.14%), Query Frame = 1 Query: 85 EMRETLVNYKRDELVDHKVQTARLREEMEALAKDRESLESQVDAVRREVAGLEASATEAEGEARSHARHSIIGPDGRVSAAHQRKRRRLEEELEAFLAALDRKKADAAALDDRLRAVEDARHEREDEMKELERSLVEVLVEQQKKLL 525 EM +TL NYKRDELV H+ +A L E+ + K E +E + R+V L+ A E R S G + ++ A K+RRL EE EA L +++KK + +D L ++ R E+E EM+ +ER LVE+LV+QQK++L Sbjct: 1814 EMTQTLTNYKRDELVAHRSSSAVLSNEISIVMKQLEEVEEMKITLERDVESLQTEAQTIEASLRDLMLQS--GNNATLNMAVVAKKRRLNEEFEALLERIEKKKVEIRNVDQTLSSLRARREEKEHEMRAMERKLVEILVQQQKQML 1958 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1006.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1006.2.1 >prot_P-wetherbeei_contig1006.2.1 ID=prot_P-wetherbeei_contig1006.2.1|Name=mRNA_P-wetherbeei_contig1006.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=259bp MRETLVNYKRDELVDHKVQTARLREEMEALAKDRESLESQVDAVRREVAGback to top mRNA from alignment at P-wetherbeei_contig1006:2062..3399+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1006.2.1 ID=mRNA_P-wetherbeei_contig1006.2.1|Name=mRNA_P-wetherbeei_contig1006.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1338bp|location=Sequence derived from alignment at P-wetherbeei_contig1006:2062..3399+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1006:2062..3399+ >mRNA_P-wetherbeei_contig1006.2.1 ID=mRNA_P-wetherbeei_contig1006.2.1|Name=mRNA_P-wetherbeei_contig1006.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=777bp|location=Sequence derived from alignment at P-wetherbeei_contig1006:2062..3399+ (Phaeothamnion wetherbeei SAG_119_79)back to top |