mRNA_P-wetherbeei_contig1.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1.5.1
Unique NamemRNA_P-wetherbeei_contig1.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1.5.1 vs. uniprot
Match: A0A650AKZ2_9CHLO (NADH dehydrogenase subunit 2 n=1 Tax=prasinophyte sp. MBIC10622 TaxID=156113 RepID=A0A650AKZ2_9CHLO)

HSP 1 Score: 314 bits (805), Expect = 2.480e-99
Identity = 182/413 (44.07%), Postives = 264/413 (63.92%), Query Frame = 1
Query:   25 YQQLADEQLTAVAKIALLLSLLGCIAIGSERFQNQWFRSLEPVLLLLLSCLGMICMISAQDWITFYLSFELQSLCLYVLAGLQRHSGFSTEAALKYFVLGAFSSCLLVLGISLIYGSTGIMTFEGCRMILIQDG----ITSPTLQIGLFLIVTAIFFKLAAVPFHMWSPDVYEGAPTAVSTVFAVVPKLALTIVLFRILHWEAHACLGWLQAFLLLCGVASMIIGSFLALVQVRLKRLLAYSGISHVGYLLISMA--TEQGVQATLLYVVIYMITALFLWGFVLASHIKLQPFQVRYISDIVGFGTSHVILALSLSVVLFSLGGIPPLAGFFAKVSVFFATIEAGFILPSLIAVLTSVVATYYYIRLIKSMFFEKGLNSWVTYRQITKSHAFMLGICTAFLVFFSVFPNIFFL 1245
            Y  L  +Q + + K+ +LLS    I I  E F ++   + E ++LLLLS   M+ M+S+ D I+ YL+ E QSLC YV+A  +R S FSTEA LKYFVLGAFSS +L+ G SL+YG TG+  FE    I         +TS  + I L  +     FK+ A PFHMW+PDVYEGAPT V+  FA+ PK+A+  +  R+     +  +G  Q  ++LC +ASMI+G+  A+ Q ++KRLLAYS I HVGYLLI  A  + +GVQA LLY++IY+I  + ++  VL+   + +  +V+Y+SD+ G   S+ ILA +L++ LFS+ GIPPLAGF +K  VFFA + +   + +++ VLTSV++ +YYIRL+K M+FE   + WV+Y  + K  A +LG+   F +FF V+P+  FL
Sbjct:   78 YNSLVVDQFSTLLKVVVLLSAFCSICISFEYFADERINAFEYIVLLLLSTCSMLLMVSSYDLISMYLAIEFQSLCFYVIAASKRTSEFSTEAGLKYFVLGAFSSGILLFGCSLLYGFTGVTNFEDLAKIFTGYAELPMLTSSGILIALIFLAVGFLFKITAAPFHMWAPDVYEGAPTCVTAFFAITPKVAVLGMFLRLFFSSFYDLMGPWQKIIVLCSLASMIVGALGAISQTKIKRLLAYSSIGHVGYLLIGFACGSVEGVQALLLYLIIYVIMTVNMFSAVLSLRTQGEGLRVKYLSDLSGLSRSNPILAFTLTMTLFSMAGIPPLAGFCSKFYVFFAALGSSMYVLAVVGVLTSVLSCFYYIRLVKVMYFETP-HVWVSYAPMDKEKAVLLGLTLFFTMFFFVYPSPLFL 489          
BLAST of mRNA_P-wetherbeei_contig1.5.1 vs. uniprot
Match: M4QBP4_ANDGO (NADH dehydrogenase subunit 2 n=1 Tax=Andalucia godoyi TaxID=505711 RepID=M4QBP4_ANDGO)

HSP 1 Score: 312 bits (800), Expect = 1.240e-98
Identity = 176/409 (43.03%), Postives = 265/409 (64.79%), Query Frame = 1
Query:   25 YQQLADEQLTAVAKIALLLSLLGCIAIGSERFQNQWFRSLEPVLLLLLSCLGMICMISAQDWITFYLSFELQSLCLYVLAGLQRHSGFSTEAALKYFVLGAFSSCLLVLGISLIYGSTGIMTFEGCRMILIQDG----ITSPTLQIGLFLIVTAIFFKLAAVPFHMWSPDVYEGAPTAVSTVFAVVPKLALTIVLFRILHWEAHACLGWLQAFLLLCGVASMIIGSFLALVQVRLKRLLAYSGISHVGYLLISMA--TEQGVQATLLYVVIYMITALFLWGFVLASHIKLQPFQVRYISDIVGFGTSHVILALSLSVVLFSLGGIPPLAGFFAKVSVFFATIEAGFILPSLIAVLTSVVATYYYIRLIKSMFFEKGLNSWVTYRQITKSHAFMLGICTAFLVFFSVFPN 1233
            +  L  +  +  AK+ +LLS +  + +  +  ++Q   S E  +L++LS LGM+ M+S+ D I+ YL+ E QSLCLYVLA L+RHS FSTEA LKYF+LGAFSS +L+ G SL+YG TG+   E    +    G    I S  + IG+ L+   + FK+ AVPFH+W PDVYEG+PT V+  FA+ P L++     R      +  L + Q  LL C +AS+I+ S  AL Q ++KRLLAYS I H GY+LI  A  T  G+QA LLY V+Y++  L ++ F+LA+  + +  Q++YISD+     ++ ILA S++++LFSL GIPPLAGF +K+ +FF+ ++       +I V+TSV+ T YY+RLI+ M+FEK + ++VTY+Q+ ++ + +LGI   F++FF  +P+
Sbjct:   74 HNTLIIDFFSQFAKLVILLSAIASLLLSLDYLRSQKINSFEYAILIVLSTLGMLLMVSSYDLISMYLALEFQSLCLYVLAALKRHSEFSTEAGLKYFILGAFSSGILLFGASLVYGFTGMTNLEDLGKLFAGLGYDHSIQSGAVLIGMLLVAVGLLFKVYAVPFHVWVPDVYEGSPTIVTAFFAMTPSLSVLAFFIRFFFSAFYDFLDYWQQMLLFCSIASLIVASLAALSQKKIKRLLAYSAIGHAGYMLIGFASGTPDGIQAMLLYSVVYIMMTLGMFAFILATREQFKGQQIKYISDLNILFKTNPILAFSVALILFSLAGIPPLAGFLSKLYIFFSAVKVSLYFVVVIGVVTSVIGTVYYLRLIQIMYFEK-VKAYVTYQQMDRTKSLLLGISCFFILFFMAYPS 481          
BLAST of mRNA_P-wetherbeei_contig1.5.1 vs. uniprot
Match: A0A7U0KSI5_9STRA (NADH dehydrogenase subunit 2 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7U0KSI5_9STRA)

HSP 1 Score: 299 bits (766), Expect = 1.440e-93
Identity = 175/403 (43.42%), Postives = 256/403 (63.52%), Query Frame = 1
Query:   43 EQLTAVAKIALLLSLLGCIAIGSERFQNQWFRSLEPVLLLLLSCLGMICMISAQDWITFYLSFELQSLCLYVLAGLQRHSGFSTEAALKYFVLGAFSSCLLVLGISLIYGSTGIMTFEGCRMILIQDGITSPTLQIGLFLIVTAIFFKLAAVPFHMWSPDVYEGAPTAVSTVFAVVPKLALTIVLFRILHWEAHACLGWLQAFLLLCGVASMIIGSFLALVQVRLKRLLAYSGISHVGYLLISMATE--QGVQATLLYVVIYMITALFLWGFVLASHIKLQPFQVRYISDIVGFGTSHVILALSLSVVLFSLGGIPPLAGFFAKVSVFFATIEAGFILPSLIAVLTSVVATYYYIRLIKSMFFEKGLNSWVTYRQITKSHAFMLGICTAFLVFFSVFPNIFFL 1245
            + L+  +K+ ++ + + C+ I     +N    S E  LL+LLS  G++ + S+ D I+ YL+ ELQSLCLYVLA   R S +STEA LKYF+LGAF+S LL+ GIS+IYG TG   FE   M+   D      +Q GL  I  A  FK+AA PFH+WSPDVY+GAP   +  FAVVPK+AL ++  R+  +       + Q  +  C VAS++ GSFLAL Q ++KRLLAYS I HVGY+LI++++   +G  A+++Y+V YM+ ++ +W        +    + R ++D+     S+ +LA S S++LFS+ G+PPLAGF+AK  VF A+I A   + S+I +L SVV+TYYYIRLIK+++FEK + + V Y+ I+K  + +LG    F  F  V PN+ +L
Sbjct:   82 DLLSQNSKLFIIAATIVCLLISLPYIRNYKVNSFEYFLLILLSVFGLMLLCSSFDLISVYLAIELQSLCLYVLAAFNRESAYSTEAGLKYFILGAFASGLLLFGISIIYGFTGTTNFEDLHMLFALDTENQRAIQTGLIFISCAFLFKMAASPFHVWSPDVYDGAPLNSTIFFAVVPKIALIVIFLRLFVFCFGTQPDYWQYLVSFCAVASVVTGSFLALKQRKIKRLLAYSSIGHVGYILIALSSGSLEGFHASVIYIVTYMLMSVGIWSVTSCLEREHPTKRTRTLTDLAMISKSNPVLAFSTSILLFSMAGVPPLAGFYAKFCVFLASINASMYVCSIIIILASVVSTYYYIRLIKTVYFEK-ITTKVFYKPISKEISLVLGFSFFFTFFLFVNPNLLWL 483          
BLAST of mRNA_P-wetherbeei_contig1.5.1 vs. uniprot
Match: D2Z1Z1_9STRA (NADH dehydrogenase subunit 2 n=1 Tax=Chattonella marina TaxID=90936 RepID=D2Z1Z1_9STRA)

HSP 1 Score: 297 bits (761), Expect = 6.800e-93
Identity = 183/405 (45.19%), Postives = 258/405 (63.70%), Query Frame = 1
Query:   40 DEQLTAVAKIALLLSLLGCIAIGSERFQNQWFRSLEPVLLLLLSCLGMICMISAQDWITFYLSFELQSLCLYVLAGLQRHSGFSTEAALKYFVLGAFSSCLLVLGISLIYGSTGIMTFEGCRMILIQDGITSPTLQIGLFLIVTAIFFKLAAVPFHMWSPDVYEGAPTAVSTVFAVVPKLALTIVLFRILHWEAHACLG---WLQAFLLLCGVASMIIGSFLALVQVRLKRLLAYSGISHVGYLLISM--ATEQGVQATLLYVVIYMITALFLWGFVLASHIKLQPFQVRYISDIVGFGTSHVILALSLSVVLFSLGGIPPLAGFFAKVSVFFATIEAGFILPSLIAVLTSVVATYYYIRLIKSMFFEKGL--NSWVTYRQITKSHAFMLGICTAFLVFFSVFPN 1233
             + L    KI LL+S+  C  + SE    Q F   E   L+LLS LG+I ++ + D+++ YL+ ELQSLC Y+LA L+R+S FSTEA LKYF+LGA +S LL+ G SLIYG TG   FE    ++I+   T+P L +G   I++ IFFKLA  PFHMW+PDVYEG+PT V+  FA+VPKL + ++L R  H+  +       W      +C + S+ IGS  A+ Q RLKRLLAYSGI H+GYLLI +  +T +G+QA   Y ++Y++T++ +WG +L  + K    Q+R+ISD+    + +  L L+L +  FSL G+PPLAGF AK+ +FFA IEA F    LI+V  SV++T+YY+R+IK+M FE+    N  V    +TKS +F++ IC   L    VFP 
Sbjct:   77 QDNLVLNIKIILLISVF-CWFLLSENSTLQMF---EFSFLILLSLLGLILLVMSFDFVSVYLAIELQSLCFYILASLKRNSAFSTEAGLKYFILGALASGLLLFGCSLIYGITGTTNFENLTNLIIEFP-TNPLLILGTLCILSGIFFKLAIAPFHMWAPDVYEGSPTIVTAFFAIVPKLGVFLLLIRFFHYIFYNLPEFNYWWSYLGSICAILSIGIGSLTAIQQKRLKRLLAYSGIGHLGYLLIGLFSSTNEGLQAICCYFILYIVTSISIWGSLLGVNNKFA--QIRFISDLKTLFSVNPFLCLTLVMSFFSLAGVPPLAGFLAKLGIFFAGIEANFYFLVLISVFMSVISTFYYLRVIKTMIFEQMYFWNKKVLINSVTKSMSFIVTICFISLFVLFVFPT 474          
BLAST of mRNA_P-wetherbeei_contig1.5.1 vs. uniprot
Match: A0A076EAU8_CHLSO (NADH dehydrogenase subunit 2 n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A076EAU8_CHLSO)

HSP 1 Score: 298 bits (762), Expect = 1.150e-92
Identity = 178/416 (42.79%), Postives = 261/416 (62.74%), Query Frame = 1
Query:   25 YQQLADEQLTAVAKIALLLSLLGCIAIGSERFQNQWFRSLEPVLLLLLSCLGMICMISAQDWITFYLSFELQSLCLYVLAGLQRHSGFSTEAALKYFVLGAFSSCLLVLGISLIYGSTGIMTFEGCRMILI---QDGITS----PTLQIGLFLIVTAIFFKLAAVPFHMWSPDVYEGAPTAVSTVFAVVPKLALTIVLFRILHWEAHACLGWLQAFLLLCGVASMIIGSFLALVQVRLKRLLAYSGISHVGYLLISMA--TEQGVQATLLYVVIYMITALFLWGFVLAS----HIKLQPFQVRYISDIVGFGTSHVILALSLSVVLFSLGGIPPLAGFFAKVSVFFATIEAGFILPSLIAVLTSVVATYYYIRLIKSMFFEKGLNSWVTYRQITKSHAFMLGICTAFLVFFSVFPN 1233
            Y  L  +  T   K  +LLS   CI +  +  + +   + E ++L+LLS   M+ ++S+ D+I+ YL+ E QSLC YVLA L+R+S FSTEA LKYF+LGAFSS LL+ G SLIYG TG+  F     I     Q+ + S    P  ++G+  ++    FK+ AVPFHMWSPDVYEGAPT V+  F +VPK AL  V  RI     +  +   Q  LL+  +ASMI+GS  AL Q R+KRLLAYS I HVGYLL   A  T +G+QA L+Y+V+Y+   + ++  +L++    H+++ P +++YI+D+     ++ +LAL+ +V LFS+ GIPPLAGF++K  +FFA + +   L ++I VL SV++ +YYIRL+K M+FE   N W ++ +I   +A  L I   F++FF  +P 
Sbjct:   91 YNTLVIDDFTTFIKGLILLSTFFCIFMSRDYMKQESLNAFEYLILILLSTSSMLFLVSSADFISLYLALEAQSLCFYVLAALKRNSEFSTEAGLKYFLLGAFSSGLLLFGCSLIYGFTGVTNFSELARIFTGGTQEFLVSTTALPACELGMVFLLVGFLFKITAVPFHMWSPDVYEGAPTPVTAFFLIVPKAALFGVFLRIFGESFYDFILPWQKILLVSSLASMILGSIAALSQTRIKRLLAYSSIGHVGYLLAGFACGTIEGIQALLIYLVVYIFMNITMFAIILSALRREHLQVVP-RLKYITDLAFLAKTNPVLALTFTVTLFSMAGIPPLAGFYSKAYLFFAALSSNLYLVAVIGVLCSVLSCFYYIRLVKIMYFEAPKN-WCSFSRIPVENAITLAITLFFILFFMFYPT 504          
BLAST of mRNA_P-wetherbeei_contig1.5.1 vs. uniprot
Match: A0A8D5TC98_9CHLO (NADH dehydrogenase subunit 2 n=1 Tax=Trebouxiophyceae sp. M-hakoo 311 TaxID=2885156 RepID=A0A8D5TC98_9CHLO)

HSP 1 Score: 297 bits (760), Expect = 2.230e-92
Identity = 179/406 (44.09%), Postives = 250/406 (61.58%), Query Frame = 1
Query:   52 TAVAKIALLLSLLGCIAIGSERFQNQWFRSLEPVLLLLLSCLGMICMISAQDWITFYLSFELQSLCLYVLAGLQRHSGFSTEAALKYFVLGAFSSCLLVLGISLIYGSTGIMTFEGCRMILIQDGITSPTL------QIGLFLIVTAIFFKLAAVPFHMWSPDVYEGAPTAVSTVFAVVPKLALTIVLFRILHWEAHACLGWLQAFLLLCGVASMIIGSFLALVQVRLKRLLAYSGISHVGYLLISMA--TEQGVQATLLYVVIYMITALFLWGFVLASHIKLQPFQ----VRYISDIVGFGTSHVILALSLSVVLFSLGGIPPLAGFFAKVSVFFATIEAGFILPSLIAVLTSVVATYYYIRLIKSMFFEKGLNSWVTYRQITKSHAFMLGICTAFLVFFSVFPN 1233
            T   KI +LL+ +  + +  +    Q+  S E  +L LLS LGM+C ISA D +  YL+ E  SLC YVLA  +R S FSTEA LKYF+LGAFSS LL+ G SLIYG TG + F+    +L Q G +S  +      ++GL  ++    FKL AVPFHMW+PDVYEGAP  V+  F++ PK +   +  R+L+   +  L   QAFL  C  ASMI+  F  L Q R+KRLLAYS I H GYLLI +   T +G+QA ++Y+V+Y+IT   L+G +L   +  Q FQ     +Y +D    G ++ +LAL+ +V LFS+ GIPPLAGF+AK +VF+  +       ++I +LTS V+ +YYIR++K M+FE    +WVT  Q +++ A+ L I   FLVF  V+P 
Sbjct:  101 TTFFKIIILLATMVTLFLSQDFLSRQFMNSFEFPILFLLSSLGMVCFISAGDLLALYLTLEFHSLCFYVLAAFRRDSEFSTEAGLKYFILGAFSSGLLLFGCSLIYGFTGTLEFDALAQLL-QGGDSSLYILEWRGCELGLLFLMVGFLFKLTAVPFHMWAPDVYEGAPLPVTAFFSIAPKASFFFLFTRVLYQSFYDFLPDWQAFLFFCSAASMILACFAGLTQSRIKRLLAYSSIGHSGYLLIGLCCGTLEGIQALVIYLVVYIITTAVLFGILLIP-VHRQGFQEVERFKYTTDFARLGKTNPLLALTCTVALFSIAGIPPLAGFYAKAAVFWTAMNVSQYSLAIIGILTSAVSCFYYIRVVKIMYFETP-KTWVTLSQPSQAAAYCLAISFLFLVFLMVYPT 503          
BLAST of mRNA_P-wetherbeei_contig1.5.1 vs. uniprot
Match: M4QD88_SECEC (NADH dehydrogenase subunit 2 n=1 Tax=Seculamonas ecuadoriensis TaxID=221724 RepID=M4QD88_SECEC)

HSP 1 Score: 296 bits (758), Expect = 2.470e-92
Identity = 170/406 (41.87%), Postives = 264/406 (65.02%), Query Frame = 1
Query:   34 LADEQLTAVAKIALLLSLLGCIAIGSERFQNQWFRSLEPVLLLLLSCLGMICMISAQDWITFYLSFELQSLCLYVLAGLQRHSGFSTEAALKYFVLGAFSSCLLVLGISLIYGSTGIMTFEGCRMILI----QDGITSPTLQIGLFLIVTAIFFKLAAVPFHMWSPDVYEGAPTAVSTVFAVVPKLALTIVLFRILHWEAHACLGWLQAFLLLCGVASMIIGSFLALVQVRLKRLLAYSGISHVGYLLISMA--TEQGVQATLLYVVIYMITALFLWGFVLASHIKLQPFQVRYISDIVGFGTSHVILALSLSVVLFSLGGIPPLAGFFAKVSVFFATIEAGFILPSLIAVLTSVVATYYYIRLIKSMFFEKGLNSWVTYRQITKSHAFMLGICTAFLVFFSVFPN 1233
            L  +  T+ +KI +L S L  + +  +  + +     E  +L+LLS LGM+ +IS+ D +T YL+ E QSLCLYVLA  +R+S  S EA LKYF+LGAF+S +L+ GISL+YG TG+ +FE    +L      + I S  L IG+  I  A+ FK+ AVPFH+W PDVYEG+PT V+  FA+ P +++  +L R++    +  + + Q  LL C + SM+IGS +AL Q ++KRLLAYS ISHVGY+L+ +A  T +G+Q+ L+YVVIY+  ++  +  +L+   K +   V  +++  G    + ILA++L++VLFS+ GIPPLAGFF+K+ +F A I++  +LP  I ++ S++ + YY+R++K M+F+K +  W  + QI K  + +L I   FLVFF ++P+
Sbjct:   79 LIIDNFTSFSKIIVLGSSLIVLIMSVDFIKKEKINFFEYAVLILLSVLGMLFIISSYDLMTMYLAIEFQSLCLYVLAAFKRNSMLSAEAGLKYFILGAFASGILLFGISLVYGFTGLTSFEDLAKLLTFANSDNLIVSTGLVIGMVFIGVALLFKIYAVPFHVWVPDVYEGSPTIVTAFFAITPSISVLSLLIRLMLSTFYDFISYWQPVLLFCAIGSMLIGSIVALTQYKIKRLLAYSAISHVGYVLLGIASGTPEGIQSLLVYVVIYIAMSINFFTVILSLR-KAKGTTVEKLNEFTGLYKINPILAVTLALVLFSMAGIPPLAGFFSKLYIFLAAIQSSLLLPVFIGIVASIIGSVYYLRIVKLMYFDKPIQ-WTVFEQIDKQKSIILAITFLFLVFFFLYPS 482          
BLAST of mRNA_P-wetherbeei_contig1.5.1 vs. uniprot
Match: A0A0R8RTD0_PRACR (NADH dehydrogenase subunit 2 n=1 Tax=Prasiola crispa TaxID=173492 RepID=A0A0R8RTD0_PRACR)

HSP 1 Score: 296 bits (759), Expect = 4.880e-92
Identity = 176/431 (40.84%), Postives = 262/431 (60.79%), Query Frame = 1
Query:   25 YQQLADEQLTAVAKIALLLSLLGCIAIGSERFQNQWFRSLEPVLLLLLSCLGMICMISAQDWITFYLSFELQSLCLYVLAGLQRHSGFSTEAALKYFVLGAFSSCLLVLGISLIYGSTGIMTFEGCRMILIQD--------------------GITSPTLQIGLFLIVTAIFFKLAAVPFHMWSPDVYEGAPTAVSTVFAVVPKLALTIVLFRILHWEAHACLGWLQAFLLLCGVASMIIGSFLALVQVRLKRLLAYSGISHVGYLLISMA--TEQGVQATLLYVVIYMITALFLWGFVLAS------HIKLQPFQVRYISDIVGFGTSHVILALSLSVVLFSLGGIPPLAGFFAKVSVFFATIEAGFILPSLIAVLTSVVATYYYIRLIKSMFFEKGLNSWVTYRQITKSHAFMLGICTAFLVFFSVFPN 1233
            Y  L  +  T   K  ++ S+  CI I     + Q F + E ++LLLLS L M+ +IS+ D+I+ YL+ ELQSLC YVLA  +R S FSTEA LKYF+LGAFSS +L+ GIS+IYG TGI  F     +                        G      ++G+  I+    FKL AVPFHMW+PDVYEGAPT+V+  F++ PK++   +L ++ +   +  +  +Q  L+   +ASMI+  F A+ Q ++KRLLA+S I HVGYLLI +   T +G+QA  +Y+VIY+I  + ++  +L++       + +   QV+YISD+     ++ ILAL+ ++ +FS+ GIPPLAGF++K  +FFA + +   L ++I VLTSV++ +YYIRLIK MFFEK     +++  + K +A +LGI   F+VFF +FP 
Sbjct:   90 YNTLVLDDFTYFLKQLVICSVFFCILISLNYMKKQSFNNFEYIILLLLSVLSMLFLISSADFISMYLAIELQSLCFYVLAASKRSSEFSTEAGLKYFLLGAFSSGILLFGISIIYGFTGITNFNELAKLFANSVNDVCEIHNYFFFKGDMNYAGSCLQACELGMIFILVGFLFKLTAVPFHMWAPDVYEGAPTSVTAFFSITPKISFLAILIKVFNNSLYDFMVPMQKILIFSSIASMILACFAAMSQNKIKRLLAFSSIGHVGYLLIGVCSGTTEGLQAVFIYLVIYIIMTINIFAIILSTLKRDENAVIVNIPQVKYISDLTMLAKTNPILALTFTLTMFSIAGIPPLAGFYSKAYLFFAAMSSTMYLVAIIGVLTSVISCFYYIRLIKIMFFEKT-RYMLSFNTVKKENAIILGITFFFIVFFMLFPT 519          
BLAST of mRNA_P-wetherbeei_contig1.5.1 vs. uniprot
Match: O21287_RECAM (NADH dehydrogenase subunit 2 n=1 Tax=Reclinomonas americana TaxID=48483 RepID=O21287_RECAM)

HSP 1 Score: 295 bits (754), Expect = 1.010e-91
Identity = 168/406 (41.38%), Postives = 263/406 (64.78%), Query Frame = 1
Query:   34 LADEQLTAVAKIALLLSLLGCIAIGSERFQNQWFRSLEPVLLLLLSCLGMICMISAQDWITFYLSFELQSLCLYVLAGLQRHSGFSTEAALKYFVLGAFSSCLLVLGISLIYGSTGIMTFEGCRMILI----QDGITSPTLQIGLFLIVTAIFFKLAAVPFHMWSPDVYEGAPTAVSTVFAVVPKLALTIVLFRILHWEAHACLGWLQAFLLLCGVASMIIGSFLALVQVRLKRLLAYSGISHVGYLLISMAT--EQGVQATLLYVVIYMITALFLWGFVLASHIKLQPFQVRYISDIVGFGTSHVILALSLSVVLFSLGGIPPLAGFFAKVSVFFATIEAGFILPSLIAVLTSVVATYYYIRLIKSMFFEKGLNSWVTYRQITKSHAFMLGICTAFLVFFSVFPN 1233
            L  +    + KI LL+S    I I  +  + +   S E ++L+LL  LGM+ +IS+ D ++ YL+ E QSLCLYVLA  +R+S FS EA LKYFVLGAFSS +++ GIS++YG TG+  FE    +LI    +  ++S  + +G+  I   + FK+ AVPFH+W PDVY+G+PT V+  FA+VP +++  +L R+     H  + + Q   + C +ASM+IGS  AL Q R+KRLLAYS I HVGY+LI+++T   +G++  L+Y+VIY+I +   +  +L+   +    Q+  I ++     S+ IL+L+L++VLFS+ GIPPLAGFF+K+ VF   I  G  L  ++ ++ SV++  YY+ LIK M+F+K L++WV++ Q+ K  A +LG+ T  ++FF ++P+
Sbjct:   79 LVADYFGLITKIVLLISSSIAIIISFDYIKKERINSFEYMVLVLLGTLGMLLIISSYDLMSMYLAIEFQSLCLYVLAAFKRNSLFSVEAGLKYFVLGAFSSGIMLFGISILYGFTGVTGFEDLGKLLIFSSNESLLSSSGIILGIVFISVGLLFKIYAVPFHVWVPDVYQGSPTIVTAFFAIVPSISVLTLLTRLYSSVLHDLIQYWQPVFIFCSIASMLIGSLGALSQRRIKRLLAYSAIGHVGYVLIALSTGTPEGIRGLLVYIVIYIIMSACFFTILLSLRKRENNTQIVMIDELRALYKSNPILSLTLAIVLFSMAGIPPLAGFFSKLYVFLPAIHEGLFLLVVVGIIASVISAVYYLGLIKIMYFDK-LDTWVSFEQVDKQKAIVLGLTTFLILFFFIYPS 483          
BLAST of mRNA_P-wetherbeei_contig1.5.1 vs. uniprot
Match: C1KRF9_MICCC (NADH dehydrogenase subunit 2 n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1KRF9_MICCC)

HSP 1 Score: 293 bits (751), Expect = 2.980e-91
Identity = 177/412 (42.96%), Postives = 253/412 (61.41%), Query Frame = 1
Query:   25 YQQLADEQLTAVAKIALLLSLLGCIAIGSERFQNQWFRSLEPVLLLLLSCLGMICMISAQDWITFYLSFELQSLCLYVLAGLQRHSGFSTEAALKYFVLGAFSSCLLVLGISLIYGSTGIMTFEGCRMILIQDGITSPT---LQIGLFLIVTAIFFKLAAVPFHMWSPDVYEGAPTAVSTVFAVVPKLALTIVLFRILHWEAHACLGWLQAFLLLCGVASMIIGSFLALVQVRLKRLLAYSGISHVGYLLISMA--TEQGVQATLLYVVIYMITALFLWGFVLASHIKLQPFQVRYISDIVGFGTSHVILALSLSVVLFSLGGIPPLAGFFAKVSVFFATIEAGFILPSLIAVLTSVVATYYYIRLIKSMFFEKGLNSWVTYRQITKSHAFMLGICTAFLVFFSVFPNIFFL 1245
            Y     ++LT + K  +L S    + +  E  +       E  +L+LLS + M+ +IS+ D+I+ YL+ E+QSLC YVLA  +RHS FSTEA LKYF+LGAFSS +L+ G SL+YG TG+  FE     L    +       L +G+ LI+    FKL A PFH W+PDVYEG+PT+V+  FA+ PK+AL  V  R+L    +  L   Q  L  C + S+ IG+F A+ Q ++KRLL YS I HVGYLLI +   T +G+QA LLY+++Y+   + ++  VL+     + F+++YI D+   G +H +LAL+ S  LFS+ GIPPLAGF +K  +FFA + +     +L  VL+SVV+ +YYIRLIK M+FE+  +  VTY  I    A +LGI T  +VFF + P+  FL
Sbjct:   79 YNTFVIDELTFLLKAMVLCSATAAMLMSMEYLKTSMLNIFEYSILVLLSTISMLLLISSYDFISMYLAIEMQSLCFYVLAASKRHSEFSTEAGLKYFLLGAFSSGVLLFGCSLVYGYTGLTNFEDIAKCLAGSALFQTHHSFLHLGMGLIMIGFLFKLTAAPFHFWAPDVYEGSPTSVTAFFAITPKIALLGVFLRLLLGSFYDLLFAWQYVLFFCSICSLFIGAFGAMAQKKIKRLLVYSSIGHVGYLLIGICCGTVEGLQAVLLYLILYIFMTVNVFTIVLSCIDHSKTFRLKYIQDLGLLGQTHPVLALTFSCTLFSMAGIPPLAGFCSKFYLFFAAMGSSLYGLALFGVLSSVVSCFYYIRLIKIMYFEQP-SQLVTYGAIDHEKAILLGITTTVIVFFFLCPHSLFL 489          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A650AKZ2_9CHLO2.480e-9944.07NADH dehydrogenase subunit 2 n=1 Tax=prasinophyte ... [more]
M4QBP4_ANDGO1.240e-9843.03NADH dehydrogenase subunit 2 n=1 Tax=Andalucia god... [more]
A0A7U0KSI5_9STRA1.440e-9343.42NADH dehydrogenase subunit 2 n=1 Tax=Pelagomonas c... [more]
D2Z1Z1_9STRA6.800e-9345.19NADH dehydrogenase subunit 2 n=1 Tax=Chattonella m... [more]
A0A076EAU8_CHLSO1.150e-9242.79NADH dehydrogenase subunit 2 n=2 Tax=Chlorella sor... [more]
A0A8D5TC98_9CHLO2.230e-9244.09NADH dehydrogenase subunit 2 n=1 Tax=Trebouxiophyc... [more]
M4QD88_SECEC2.470e-9241.87NADH dehydrogenase subunit 2 n=1 Tax=Seculamonas e... [more]
A0A0R8RTD0_PRACR4.880e-9240.84NADH dehydrogenase subunit 2 n=1 Tax=Prasiola cris... [more]
O21287_RECAM1.010e-9141.38NADH dehydrogenase subunit 2 n=1 Tax=Reclinomonas ... [more]
C1KRF9_MICCC2.980e-9142.96NADH dehydrogenase subunit 2 n=1 Tax=Micromonas co... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1contigP-wetherbeei_contig1:11877..13151 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog311403.Arad_1863
Preferred namenuoN
PFAMsProton_antipo_M
Model size1275
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00061
KEGG koko:K00343
KEGG TC3.D.1
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,map00190,map01100
KEGG ModuleM00144
Hectar predicted targeting categorysignal anchor
Exons1
Evalue4.32e-81
EggNOG OGsCOG1007@1|root,COG1007@2|Bacteria,1MV56@1224|Proteobacteria,2TQMX@28211|Alphaproteobacteria,4BABT@82115|Rhizobiaceae
EC1.6.5.3
DescriptionNDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
Cds size1275
COG categoryC
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683185847.8627439-CDS-P-wetherbeei_contig1:11876..131511683185847.8627439-CDS-P-wetherbeei_contig1:11876..13151Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1 11877..13151 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1.5.1prot_P-wetherbeei_contig1.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1 11877..13151 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1.5.1

>prot_P-wetherbeei_contig1.5.1 ID=prot_P-wetherbeei_contig1.5.1|Name=mRNA_P-wetherbeei_contig1.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=425bp
GSQTVWFGYQQLADEQLTAVAKIALLLSLLGCIAIGSERFQNQWFRSLEP
VLLLLLSCLGMICMISAQDWITFYLSFELQSLCLYVLAGLQRHSGFSTEA
ALKYFVLGAFSSCLLVLGISLIYGSTGIMTFEGCRMILIQDGITSPTLQI
GLFLIVTAIFFKLAAVPFHMWSPDVYEGAPTAVSTVFAVVPKLALTIVLF
RILHWEAHACLGWLQAFLLLCGVASMIIGSFLALVQVRLKRLLAYSGISH
VGYLLISMATEQGVQATLLYVVIYMITALFLWGFVLASHIKLQPFQVRYI
SDIVGFGTSHVILALSLSVVLFSLGGIPPLAGFFAKVSVFFATIEAGFIL
PSLIAVLTSVVATYYYIRLIKSMFFEKGLNSWVTYRQITKSHAFMLGICT
AFLVFFSVFPNIFFLGACYLAPLL*
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mRNA from alignment at P-wetherbeei_contig1:11877..13151-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1.5.1 ID=mRNA_P-wetherbeei_contig1.5.1|Name=mRNA_P-wetherbeei_contig1.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1275bp|location=Sequence derived from alignment at P-wetherbeei_contig1:11877..13151- (Phaeothamnion wetherbeei SAG_119_79)
GGAAGTCAGACTGTATGGTTTGGGTATCAACAATTGGCTGATGAACAATT AACGGCAGTAGCAAAAATTGCTTTGCTTTTAAGTTTGCTTGGTTGTATTG CAATTGGGAGCGAACGGTTTCAAAATCAGTGGTTTCGCAGCTTAGAACCA GTTTTACTTTTGTTATTAAGCTGCCTTGGGATGATTTGTATGATTTCTGC ACAAGATTGGATTACATTTTATCTTAGTTTTGAATTACAAAGTTTATGCT TGTATGTTTTGGCGGGTCTACAACGTCATTCAGGATTTTCGACAGAAGCC GCTTTGAAATATTTTGTTTTAGGCGCTTTTTCTTCCTGCTTACTTGTATT AGGAATCTCTTTAATCTACGGAAGTACAGGAATTATGACGTTTGAAGGAT GTCGAATGATTCTTATTCAGGACGGTATAACTTCTCCAACATTGCAAATT GGTCTTTTTTTAATTGTTACTGCAATTTTCTTTAAACTTGCAGCAGTACC TTTTCATATGTGGTCCCCTGATGTGTATGAAGGGGCTCCTACGGCTGTTA GTACAGTATTCGCTGTTGTACCAAAATTAGCATTGACTATTGTTCTTTTT AGAATTCTTCATTGGGAAGCGCATGCTTGTCTTGGTTGGCTTCAAGCATT TTTACTTTTATGTGGTGTAGCTTCTATGATAATTGGTTCTTTTCTGGCTC TGGTTCAAGTACGATTAAAACGCCTATTAGCCTATAGTGGAATTAGTCAT GTAGGTTATCTTCTTATTAGTATGGCAACGGAACAAGGTGTACAAGCTAC TTTACTATATGTTGTAATTTATATGATTACTGCCCTTTTTCTTTGGGGAT TCGTACTGGCCTCCCATATTAAATTACAGCCTTTTCAAGTTCGTTATATT TCAGATATAGTTGGATTTGGAACATCACATGTTATCTTAGCACTAAGTTT AAGTGTTGTTCTTTTTTCGCTTGGGGGAATTCCTCCTTTAGCAGGGTTTT TTGCTAAAGTTTCTGTTTTTTTTGCAACCATCGAAGCAGGATTTATTCTT CCTTCTTTAATTGCTGTTTTAACTAGTGTTGTAGCAACTTATTATTATAT TCGTCTGATTAAATCAATGTTTTTTGAAAAGGGATTAAACTCTTGGGTAA CCTATCGTCAAATTACCAAATCACATGCCTTTATGTTAGGTATTTGTACC GCTTTTCTTGTTTTTTTTTCTGTTTTTCCTAACATCTTTTTTTTAGGCGC ATGTTACCTTGCCCCTCTTCTTTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1:11877..13151-

>mRNA_P-wetherbeei_contig1.5.1 ID=mRNA_P-wetherbeei_contig1.5.1|Name=mRNA_P-wetherbeei_contig1.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1275bp|location=Sequence derived from alignment at P-wetherbeei_contig1:11877..13151- (Phaeothamnion wetherbeei SAG_119_79)
GGAAGTCAGACTGTATGGTTTGGGTATCAACAATTGGCTGATGAACAATT
AACGGCAGTAGCAAAAATTGCTTTGCTTTTAAGTTTGCTTGGTTGTATTG
CAATTGGGAGCGAACGGTTTCAAAATCAGTGGTTTCGCAGCTTAGAACCA
GTTTTACTTTTGTTATTAAGCTGCCTTGGGATGATTTGTATGATTTCTGC
ACAAGATTGGATTACATTTTATCTTAGTTTTGAATTACAAAGTTTATGCT
TGTATGTTTTGGCGGGTCTACAACGTCATTCAGGATTTTCGACAGAAGCC
GCTTTGAAATATTTTGTTTTAGGCGCTTTTTCTTCCTGCTTACTTGTATT
AGGAATCTCTTTAATCTACGGAAGTACAGGAATTATGACGTTTGAAGGAT
GTCGAATGATTCTTATTCAGGACGGTATAACTTCTCCAACATTGCAAATT
GGTCTTTTTTTAATTGTTACTGCAATTTTCTTTAAACTTGCAGCAGTACC
TTTTCATATGTGGTCCCCTGATGTGTATGAAGGGGCTCCTACGGCTGTTA
GTACAGTATTCGCTGTTGTACCAAAATTAGCATTGACTATTGTTCTTTTT
AGAATTCTTCATTGGGAAGCGCATGCTTGTCTTGGTTGGCTTCAAGCATT
TTTACTTTTATGTGGTGTAGCTTCTATGATAATTGGTTCTTTTCTGGCTC
TGGTTCAAGTACGATTAAAACGCCTATTAGCCTATAGTGGAATTAGTCAT
GTAGGTTATCTTCTTATTAGTATGGCAACGGAACAAGGTGTACAAGCTAC
TTTACTATATGTTGTAATTTATATGATTACTGCCCTTTTTCTTTGGGGAT
TCGTACTGGCCTCCCATATTAAATTACAGCCTTTTCAAGTTCGTTATATT
TCAGATATAGTTGGATTTGGAACATCACATGTTATCTTAGCACTAAGTTT
AAGTGTTGTTCTTTTTTCGCTTGGGGGAATTCCTCCTTTAGCAGGGTTTT
TTGCTAAAGTTTCTGTTTTTTTTGCAACCATCGAAGCAGGATTTATTCTT
CCTTCTTTAATTGCTGTTTTAACTAGTGTTGTAGCAACTTATTATTATAT
TCGTCTGATTAAATCAATGTTTTTTGAAAAGGGATTAAACTCTTGGGTAA
CCTATCGTCAAATTACCAAATCACATGCCTTTATGTTAGGTATTTGTACC
GCTTTTCTTGTTTTTTTTTCTGTTTTTCCTAACATCTTTTTTTTAGGCGC
ATGTTACCTTGCCCCTCTTCTTTAG
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