prot_P-canaliculata_contig103546.495.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig103546.495.1
Unique Nameprot_P-canaliculata_contig103546.495.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length279
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig103546.495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 262..278
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 256..261
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 143..147
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 22..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..21
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..172
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 230..234
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..72
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 279..279
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..142
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 173..209
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 235..255
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 108..118
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..87
NoneNo IPR availableTMHMMTMhelixcoord: 234..256
NoneNo IPR availableTMHMMTMhelixcoord: 113..135
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 150..172
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 87..106
NoneNo IPR availableTMHMMTMhelixcoord: 210..229

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig103546contigP-canaliculata_contig103546:2..838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig103546.495.1mRNA_P-canaliculata_contig103546.495.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig103546 2..838 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig103546.495.1 ID=prot_P-canaliculata_contig103546.495.1|Name=mRNA_P-canaliculata_contig103546.495.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=279bp
LNYPIFASEGCDLQASLFSTEITSRLALLFCSISLFAFLEMSFRENSKST
SFSIVAGISLFTLMSFSNTFWFETNLLQYLVGPSNSLLILRYTLPFLVAA
AMVRFWTSPFKLGILIGGLLFYSPDTGLPTAFAAFALTAMAGTDLKRLVF
GTMAGLVLGTILVTGGDLGAFIEFRKGMANGQFWYFPLYSDEFKYFDIPS
LMIYFRRDSIFLSAALLLSPVLILVLLLVSKRRPYVLAFVTLVTGVFGGA
ALTEFGGNISDRYWSATLFVFPFLVLFTI
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