mRNA_P-canaliculata_contig10342.479.1 (mRNA) Pelvetia canaliculata dioecious
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Overview
Homology
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 694 bits (1791), Expect = 4.060e-232 Identity = 373/728 (51.24%), Postives = 461/728 (63.32%), Query Frame = 1
Query: 31 YDELGCYEDSRKRIFT-EVTKGIEDLTETS-CATICEDFPYFGLQYGSECWCGDYTSDIDSYDESDGCNMVCTGDSDANCGGNYAMRIFTRAMTDD---------------DAIGCYGDSSIDRVFS-DKLVD-QAGMNPEVCFDHCNSEGALYYGTQWGEECWCGYDEDDYDRLGLAT-CDRPCSGDSTLFCGGTYAMTVYEIDDDKTEEPPSSVPSPVPSGSSMPVSSPTP-----------------VMTIPDECTGTKS--SIRWASGTGLNGRMYLEDGGCGTMTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSDGRPGENSFYDNTISNTKTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNTFDDANDDLCYKNFESSSFASTDTLPPLC 2094
Y GCY DS R+ + + + + T+ CA CE YFG+Q+G EC+C D ES+ C M C+GDS CGG+YA++++ + +++GC+ D S DRV S D ++ + M C D C EG+ Y+GT++ EC+C D D LG A+ CD CSGDS+ CGG A+ VY ++D P P +M I C + S R+A+ +G+ GR+Y E GC TMTDLY R E+DG + KGP+Y+LDD+ + P+ +T WLL +EL++ G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE Y++GRSFLNCVSE + + C G KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA NEVYNNVNHGIIASKRCNNVKI+ENEV GGA AAGIFLHRSSD V+DN + +MQDAG+A+LESFDA I+ N KYGIR+SLG GNN VY N F + SQYGLYTY+GSD PD S DGRP N N + + GVKIKE D+ NTF EF +++ T+WS N D C + + AS P+C
Sbjct: 177 YSFAGCYVDSPDRVLSGDSMMSVNSVMTTAYCADFCEGSDYFGVQFGYECFCSSSGDTPDELGESEDCEMACSGDSSEICGGSYAIQVYEYSDXXXXXXXXXXXXXXXXXYESVGCFVDDSSDRVLSGDSMLSINSVMTAAYCADFC--EGSTYFGTEYAFECFCSSSGDSPDELGEASNCDMTCSGDSSETCGGFNAIQVYMLED-----------GPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMEISSSCGDDEDRPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG----CIEEDDEFDAASGSDSIPIC 885
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 574 bits (1480), Expect = 6.950e-191 Identity = 288/434 (66.36%), Postives = 337/434 (77.65%), Query Frame = 1
Query: 757 EDGGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAP-DASSDGRPGENSFYDNTISNTKTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNTFDDANDDLCYKNFES 2055
E GC T+TDLY R+ESDG + KGPI+ LDD+ + + +P ++ KWLLT+EL + G+VFYCRG+SIGGDCDELRIQSTG TDFHEVR HGGS+YFE T+VTSWDTPNK+PQ Y GRSFLNCVSE + E CVGQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++ SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT IIASKRCNNV+IY NEVY GG AAGIFLHRSSD V+DNVV+DMQDAG+A+LES +ADI++N F++VK+GIR+SLG N+V++N+F++ S GLYTYQGSD P D SDGRP +N F +N I N GVKIKE D+TVIT N FTGTS LEF DA T W NT +C KN S
Sbjct: 83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHS 500
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 562 bits (1448), Expect = 5.430e-187 Identity = 284/461 (61.61%), Postives = 341/461 (73.97%), Query Frame = 1
Query: 757 EDGGCGTMTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSDGRPGENSFYDNTISNTKTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNTFDDANDDLCYKNFES--------SSFASTDTLP 2085
E GC T+TDLY R E+DG + KGP+Y+LD + + +PTSVT KWLL +EL+V G++FYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF T+VTSWDTPNK PQE Y+ GRSFLNCVSE + ETC G KND GECRMDII+SEMGY+G+FDSESYGLTWKVR GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY +ANN+VYNN NHGIIASKRCNNVKIY+N+V GG A GIFLHRSSD+ EVY N +++M DAG+A+LESF+ADIHDN V++GIR+SLG G N+VYDN F++CS +GLYTY GSD PD S+ GRP N+F +N ++N+ GVK K +DN V+T N FTGT LEF DA T WS N+ +C N S S+F+S+ +P
Sbjct: 18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSG---VCIDNITSDDGNSVPPSTFSSSSGVP 461
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 547 bits (1410), Expect = 1.350e-181 Identity = 270/448 (60.27%), Postives = 332/448 (74.11%), Query Frame = 1
Query: 757 EDGGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEY-ESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSDGRPGENSFYDNTISNTKTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNTFDDANDDLCYKNFESSS-FASTDTLPPLC 2094
+ GGC T++DLY + + KGP+++LD ND + + T+ TGKWLLT++LFV G+ YCRG +GG+C ELRI+ST +DF E+RGHGG+LYFE T+VTSWD + PQE YKDGRSF+ CVSE ++TC N+ GECRMDIIDSEMGYLG+ SE+YG+TWKVRGFC+D SNP+VFD NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA N+VYNNVNHGIIASKRCNNVKIY+NEVY GGA AAGIFLHRS D EVY N + +M DAG+A+LE+ DIHDN ++GIR+ LG NN V+DNVF G++TY GSD P GRP +N FY+NTI T+TGVKIKE+DN IT N F+GT+ +EFN+A VWS N+ + C ++ +++S F + LP C
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTCA---INNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPT---NTCLEDIDNNSTFTGSSGLPLEC 447
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 548 bits (1412), Expect = 3.880e-179 Identity = 299/590 (50.68%), Postives = 374/590 (63.39%), Query Frame = 1
Query: 283 RIFTRAMTDDDAIGCYGDSSIDRVFSDKLVDQAGMNPEVCFDHCNSEGALYYGTQWGEECWCGYDEDDYDRL---GLATCDRPCSGDSTLFCGGTYAMTVYEIDDDKTEEPPSSVPSPVPSGSSMPVSSPTPVMTIPDECTGTKSSIRWASGTGLNGRMYLEDGGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEYESDET--CVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDA-SSDGRPGENSFYDNTISNT--KTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNT 2010
R +D +++GC+ D+S RV +L DQA M P++C +C G YY QW ECWC + D L GL TCD C GDS CGG +A TVYE+ + T +PTP T + T +R+ Y E GGCGT+T +Y+++ E DG P+Y+LD+N+D++ + TG WLL L V+ GS GT+ GD D LR+ ST S DF EVRG+GG+L+F+ T VTSWDT N +E DGRSF+NCV++++ C G+ ++GECRMDII S MG +GWFD+ESYGLTWKVRG C N E+F+ NVYGDI NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+NN VY N NHGIIASKRCNNVKI+ NEVY GG A GIFLHRSSD EV+DNVVY+MQDAG+A++ES+DA+I+DN+FTN +YGIR+SLG G N + +N+F +QYGLYTY GSD PD +S+GRP +N F NTI GV IKE D+ V N FTG S EF D+S T W NT
Sbjct: 62 RTLITGQSDPNSLGCFADTSDGRVMEAQLTDQA-MTPDMCNAYCEDLGYYYYAVQWSIECWCAPETTTADELAVHGLGTCDFACGGDSDQICGGFWAFTVYEVGTEST--------------------TPTPSATTSCDSAAT---VRFTDDIA-----YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE) HSP 1 Score: 472 bits (1215), Expect = 5.380e-154 Identity = 231/348 (66.38%), Postives = 265/348 (76.15%), Query Frame = 1
Query: 778 MTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQ 1794
MTDLY R E DG + KGP+Y+LDD+ + P+ +T WLL +EL++ G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE Y+ GRSFLNCVSE + + C G KN+ GECRMDII+SE+ YLG+FDSESYG+TWK VRGFC D SNPEVFD TNVYGD+ SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT IIASKRCNNVKI+ENEV GGA A GIFLHRSSD V+DN + +MQDAG+A+LE+FDA I+ NT KYGIR+SLG GNN VY N F + SQ
Sbjct: 1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTR------------IIASKRCNNVKIFENEVRDGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 474 bits (1220), Expect = 5.890e-148 Identity = 252/459 (54.90%), Postives = 313/459 (68.19%), Query Frame = 1
Query: 742 GRMYLEDGGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEYESD--ETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSD--GRPGENSFYDNTISNTKTGVKIKEADNTVITGNTFTGTSLLE---FNDASGTVWSSNTFDDANDDLCYKNFESSSFA-STDTLPPLC 2094
G+ Y+ GGC T+TD+Y ++ G GP+++LD ND+++ S TG WLL ++ V GS+ G GGD LRIQSTGS D++E+RGHGGSL F T VTSWDT K +YK RSF+ CVSE +D +TC G N GECRMDII SEMG +G+ +ESYG++WKVRG+C++ NPEVF+ T V GDI +SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA N V+ N NHGIIASKRCNNVKI+ N VY GG A GIFLHRSSD CEV+ N VYDM+DAG+AI+ES A IHDNTFTNVKYGIR+S+G N V +N F EC QYG+YTYQG+D P+AS D G +N+F+ NT+ GVKI++A+ V T N F S E F D VW++N D D+C K ++ + S D+LP LC
Sbjct: 398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLKGDKNIDYMKSYDSLPDLC 845
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 446 bits (1147), Expect = 9.420e-144 Identity = 238/423 (56.26%), Postives = 276/423 (65.25%), Query Frame = 1
Query: 841 ILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSDGRPGENSFYDNTISNTKTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNTFDDANDDLCYKNFES--------SSFASTDTLP 2085
+LDD+ + + SPTSVT KWLL SEL+V G++FYC G+ GGDCDELRIQSTG D++EVRGHGGS+YF T+VTSWDTPNK PQE Y+ GRSFLNCVSE + ETC G+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIA ASKRCNNV+IY NEV GG +A GIFLHRSSD+ EVY G DAPD S+ GRP N+F +N I+NT GVKIK +DN VI+ N FTGT LEF DA T WS N+ +C N S S+F+S+ +P
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSG---VCIDNVTSDDGNSVPPSTFSSSSGVP 364
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 432 bits (1111), Expect = 2.170e-136 Identity = 242/456 (53.07%), Postives = 293/456 (64.25%), Query Frame = 1
Query: 709 SIRWASGTGLNGRMYLED-------GGCGTMTDLYKSRVESDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEY--ESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSDGRPGENSFYDNTISNTKTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNTFDDANDDLCYKN 2046
SIR+A G R+YLE GGC T+ +++SR KGP+Y +D D+ ++ TS TG WLLT EL+V G G+ GGD DELR+ ST T F +R HGGSL F T V SWDT SP ED DGRS+++ +SE + DETC G KN GE RMDI SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD NVYG++ +SDIHHM +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI +NEVYNN HGIIASKRCN V I NEVYGG +AGIFLHRSSD V N V+D DAGLA+LESF+AD+ +NTF N KYG+R S+G +N +N ++Y Y+Y G+D PD S GR N F N+ S + +KIKEAD T N F E DA G V FD+A ++L N
Sbjct: 45 SIRYA---GTTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPDSGNVS---TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF------EVGDADGLVV---RFDNATENLMQGN 478
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 431 bits (1109), Expect = 4.850e-136 Identity = 249/493 (50.51%), Postives = 310/493 (62.88%), Query Frame = 1
Query: 658 SPTPVMTIPDECTGTKSSIRWASGTGLNGRMYLED------GGCGTMTDLYKSRVESDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEY--ESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSDGRPGENSFYDNTISNTKTGVKIKEADNTVITGNTF-TGTS---LLEFNDASGTVWSSNT-FDDANDDLCYKNFESSSFASTDTLPPLC 2094
SP ++ PD + + SIR+A G R+YLE GGC T+ +++SR K P+Y +D D+ D+ + T G WLLT EL+V G GT GGD DELR+ ST T + +R HGGSL F T V SWDT SP ED DGRS+++ VSE + DETC G KN GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD NVYG++ +SDIHH+ +G+Y+YGHQ G W NKMHDN YGFDPHDDSD+LTI +NEVYNN HGIIASKRCN V I NEVYGG +AGIFLHRSSD V N V+D DAGLA+LESF+AD+ +NTF N KYG+R+S+G +N +N+ S+Y YTY GSD PD S GR N F N+ S + +KIKEAD T N F G + ++ F+DA +V NT D+ + +L N S P+C
Sbjct: 33 SPNDPISKPDCDSDIEVSIRYA---GTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDVSETET---GTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512 The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-canaliculata_contig10342.479.1 >prot_P-canaliculata_contig10342.479.1 ID=prot_P-canaliculata_contig10342.479.1|Name=mRNA_P-canaliculata_contig10342.479.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=622bp MVCTGDSDANCGGNYAMRIFTRAMTDDDAIGCYGDSSIDRVFSDKLVDQAback to top mRNA from alignment at P-canaliculata_contig10342:388..6341+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-canaliculata_contig10342.479.1 ID=mRNA_P-canaliculata_contig10342.479.1|Name=mRNA_P-canaliculata_contig10342.479.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=5954bp|location=Sequence derived from alignment at P-canaliculata_contig10342:388..6341+ (Pelvetia canaliculata dioecious)back to top Coding sequence (CDS) from alignment at P-canaliculata_contig10342:388..6341+ >mRNA_P-canaliculata_contig10342.479.1 ID=mRNA_P-canaliculata_contig10342.479.1|Name=mRNA_P-canaliculata_contig10342.479.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=3732bp|location=Sequence derived from alignment at P-canaliculata_contig10342:388..6341+ (Pelvetia canaliculata dioecious)back to top |