prot_P-canaliculata_contig10342.479.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10342.479.1
Unique Nameprot_P-canaliculata_contig10342.479.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length622
Homology
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI)

HSP 1 Score: 652 bits (1682), Expect = 3.580e-223
Identity = 349/659 (52.96%), Postives = 427/659 (64.80%), Query Frame = 0
Query:    1 MVCTGDSDANCGGNYAMRIFTRAMTDD---------------DAIGCYGDSSIDRVFS-DKLVD-QAGMNPEVCFDHCNSEGALYYGTQWGEECWCGYDEDDYDRLGLAT-CDRPCSGDSTLFCGGTYAMTVYEIDDDKTEEPPSSVPSPVPSGSSMPVSSPTP-----------------VMTIPDECTGTKS--SIRWASGTGLNGRMYLEDGGCGTMTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSDGRPGENSFYDNTISNTKTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNTFDDANDDLCYKNFESSSFASTDTLPPLC 621
            M C+GDS   CGG+YA++++  +                   +++GC+ D S DRV S D ++   + M    C D C  EG+ Y+GT++  EC+C    D  D LG A+ CD  CSGDS+  CGG  A+ VY ++D            P P                             +M I   C   +   S R+A+ +G+ GR+Y E  GC TMTDLY  R  E+DG + KGP+Y+LDD+   +  P+ +T  WLL +EL++  G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE Y++GRSFLNCVSE  + + C G  KN+ GECRMDII+SE+ YLG+FDSESYG+TWKVRGFC D SNPEVF+ TNVYGD+  SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLTIA NEVYNNVNHGIIASKRCNNVKI+ENEV  GGA AAGIFLHRSSD   V+DN + +MQDAG+A+LESFDA I+ N     KYGIR+SLG GNN VY N F + SQYGLYTY+GSD PD S DGRP  N    N + +   GVKIKE D+     NTF      EF +++ T+WS N   D     C +  +    AS     P+C
Sbjct:  246 MACSGDSSEICGGSYAIQVYEYSDXXXXXXXXXXXXXXXXXYESVGCFVDDSSDRVLSGDSMLSINSVMTAAYCADFC--EGSTYFGTEYAFECFCSSSGDSPDELGEASNCDMTCSGDSSETCGGFNAIQVYMLED-----------GPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMEISSSCGDDEDRPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVS-DGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG----CIEEDDEFDAASGSDSIPIC 885          
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI)

HSP 1 Score: 574 bits (1480), Expect = 7.170e-198
Identity = 288/434 (66.36%), Postives = 337/434 (77.65%), Query Frame = 0
Query:  176 EDGGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAP-DASSDGRPGENSFYDNTISNTKTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNTFDDANDDLCYKNFES 608
            E  GC T+TDLY  R+ESDG + KGPI+ LDD+ + + +P  ++ KWLLT+EL +  G+VFYCRG+SIGGDCDELRIQSTG TDFHEVR HGGS+YFE T+VTSWDTPNK+PQ  Y  GRSFLNCVSE  + E CVGQ +N+ GECRMDII+SE+GYLG+FDSESYGLTWKVRGFC D SNP+VFDTTNVYG++  SDIHH YYG YSYGHQGGVW NN+MHDNHQYGFDPHDDSDYLT             IIASKRCNNV+IY NEVY GG  AAGIFLHRSSD   V+DNVV+DMQDAG+A+LES +ADI++N F++VK+GIR+SLG   N+V++N+F++ S  GLYTYQGSD P D  SDGRP +N F +N I N   GVKIKE D+TVIT N FTGTS LEF DA  T W  NT       +C KN  S
Sbjct:   83 EGEGCFTITDLYNFRLESDG-SAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEVCVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQG---VCIKNIHS 500          
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE)

HSP 1 Score: 561 bits (1445), Expect = 1.860e-193
Identity = 284/461 (61.61%), Postives = 341/461 (73.97%), Query Frame = 0
Query:  176 EDGGCGTMTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVR---------GFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSDGRPGENSFYDNTISNTKTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNTFDDANDDLCYKNFES--------SSFASTDTLP 618
            E  GC T+TDLY  R  E+DG + KGP+Y+LD +   + +PTSVT KWLL +EL+V  G++FYC G+  GGDCDELRIQSTG  D++EVRGHGGS+YF  T+VTSWDTPNK PQE Y+ GRSFLNCVSE  + ETC G  KND GECRMDII+SEMGY+G+FDSESYGLTWKVR         GFC D SNP+VF+TTNVYGDIKNSDIHHMYYG YSYGHQGGVWTNN+MHDNHQY            +ANN+VYNN NHGIIASKRCNNVKIY+N+V  GG  A GIFLHRSSD+ EVY N +++M DAG+A+LESF+ADIHDN    V++GIR+SLG G N+VYDN F++CS +GLYTY GSD PD S+ GRP  N+F +N ++N+  GVK K +DN V+T N FTGT  LEF DA  T WS N+       +C  N  S        S+F+S+  +P
Sbjct:   18 ESEGCFTLTDLYNFRGTENDG-SSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSN-GRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSG---VCIDNITSDDGNSVPPSTFSSSSGVP 461          
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 546 bits (1407), Expect = 5.590e-188
Identity = 270/448 (60.27%), Postives = 332/448 (74.11%), Query Frame = 0
Query:  176 EDGGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEY-ESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSDGRPGENSFYDNTISNTKTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNTFDDANDDLCYKNFESSS-FASTDTLPPLC 621
            + GGC T++DLY  +   +    KGP+++LD ND +  + T+ TGKWLLT++LFV  G+  YCRG  +GG+C ELRI+ST  +DF E+RGHGG+LYFE T+VTSWD   + PQE YKDGRSF+ CVSE    ++TC     N+ GECRMDIIDSEMGYLG+  SE+YG+TWKVRGFC+D SNP+VFD  NVYGD+K SDIHHMYYGMYS+GHQGGVWTNN MHDNHQYGFDPHDDSDYL IA N+VYNNVNHGIIASKRCNNVKIY+NEVY GGA AAGIFLHRS D  EVY N + +M DAG+A+LE+   DIHDN     ++GIR+ LG  NN V+DNVF      G++TY GSD P     GRP +N FY+NTI  T+TGVKIKE+DN  IT N F+GT+ +EFN+A   VWS N+      + C ++ +++S F  +  LP  C
Sbjct:    7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTCA---INNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGG-GRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPT---NTCLEDIDNNSTFTGSSGLPLEC 447          
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI)

HSP 1 Score: 547 bits (1410), Expect = 1.120e-185
Identity = 299/590 (50.68%), Postives = 374/590 (63.39%), Query Frame = 0
Query:   18 RIFTRAMTDDDAIGCYGDSSIDRVFSDKLVDQAGMNPEVCFDHCNSEGALYYGTQWGEECWCGYDEDDYDRL---GLATCDRPCSGDSTLFCGGTYAMTVYEIDDDKTEEPPSSVPSPVPSGSSMPVSSPTPVMTIPDECTGTKSSIRWASGTGLNGRMYLEDGGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEYESDET--CVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKS------NPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDA-SSDGRPGENSFYDNTISNT--KTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNT 593
            R      +D +++GC+ D+S  RV   +L DQA M P++C  +C   G  YY  QW  ECWC  +    D L   GL TCD  C GDS   CGG +A TVYE+  + T                    +PTP  T   +   T   +R+          Y E GGCGT+T +Y+++ E DG     P+Y+LD+N+D++    + TG WLL   L V+ GS     GT+  GD D LR+ ST S DF EVRG+GG+L+F+ T VTSWDT N   +E   DGRSF+NCV++++      C G+   ++GECRMDII S MG +GWFD+ESYGLTWKVRG C          N E+F+  NVYGDI NS+I+ MYYG YSYGHQGGVW +N M DN QYGFDPHDDSD LTI+NN VY N NHGIIASKRCNNVKI+ NEVY GG  A GIFLHRSSD  EV+DNVVY+MQDAG+A++ES+DA+I+DN+FTN +YGIR+SLG G N + +N+F   +QYGLYTY GSD PD  +S+GRP +N F  NTI       GV IKE D+ V   N FTG S  EF D+S T W  NT
Sbjct:   62 RTLITGQSDPNSLGCFADTSDGRVMEAQLTDQA-MTPDMCNAYCEDLGYYYYAVQWSIECWCAPETTTADELAVHGLGTCDFACGGDSDQICGGFWAFTVYEVGTEST--------------------TPTPSATTSCDSAAT---VRFTDDIA-----YFEGGGCGTLTQMYEAQ-EGDG-----PLYVLDENNDVVGG--TPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT 613          
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: A0A6H5KWQ2_9PHAE (MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWQ2_9PHAE)

HSP 1 Score: 472 bits (1215), Expect = 2.500e-160
Identity = 231/348 (66.38%), Postives = 265/348 (76.15%), Query Frame = 0
Query:  183 MTDLYKSR-VESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWK--------VRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQ 521
            MTDLY  R  E DG + KGP+Y+LDD+   +  P+ +T  WLL +EL++  G VFYC+GTS GGDC++LRIQSTGS DFHEVRGHGGSLYFE T+VTSWDTPNK PQE Y+ GRSFLNCVSE  + + C G  KN+ GECRMDII+SE+ YLG+FDSESYG+TWK        VRGFC D SNPEVFD TNVYGD+  SDIHH+YYG YSYGHQGGVWTNNKMHDN QYGFDPHDDSDYLT             IIASKRCNNVKI+ENEV  GGA A GIFLHRSSD   V+DN + +MQDAG+A+LE+FDA I+ NT    KYGIR+SLG GNN VY N F + SQ
Sbjct:    1 MTDLYNFRGTEKDG-SSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYEGGRSFLNCVSEKLTGDDCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKARLTRGFPVRGFCKDLSNPEVFDLTNVYGDLIGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTR------------IIASKRCNNVKIFENEVRDGGAAAVGIFLHRSSDDAAVFDNTITNMQDAGIALLEAFDAQIYGNTINGAKYGIRMSLGSGNNVVYQNSFTDISQ 335          
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 473 bits (1217), Expect = 7.400e-154
Identity = 252/459 (54.90%), Postives = 313/459 (68.19%), Query Frame = 0
Query:  171 GRMYLEDGGCGTMTDLYKSRVESDGWTPKGPIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEYESD--ETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSD--GRPGENSFYDNTISNTKTGVKIKEADNTVITGNTFTGTSLLE---FNDASGTVWSSNTFDDANDDLCYKNFESSSFA-STDTLPPLC 621
            G+ Y+  GGC T+TD+Y ++    G    GP+++LD ND+++    S TG WLL  ++ V  GS+    G   GGD   LRIQSTGS D++E+RGHGGSL F  T VTSWDT  K    +YK  RSF+ CVSE  +D  +TC G   N  GECRMDII SEMG +G+  +ESYG++WKVRG+C++  NPEVF+ T V GDI +SDI+ MYYG YS+GH GG+WT NKMHDN QYGFDPHDDSD L IA N V+ N NHGIIASKRCNNVKI+ N VY GG  A GIFLHRSSD CEV+ N VYDM+DAG+AI+ES  A IHDNTFTNVKYGIR+S+G   N V +N F EC QYG+YTYQG+D P+AS D  G   +N+F+ NT+     GVKI++A+  V T N F   S  E   F D    VW++N   D   D+C K  ++  +  S D+LP LC
Sbjct:  398 GKNYIRGGGCATLTDIYTAQG---GHNDDGPLFVLDSNDNVVGG--SPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTVEG---GVKIQKAEGIVFTDNNFYEHSSGEEYRFEDCEDVVWTNNRVPD---DICLKGDKNIDYMKSYDSLPDLC 845          
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 445 bits (1144), Expect = 2.040e-149
Identity = 238/423 (56.26%), Postives = 276/423 (65.25%), Query Frame = 0
Query:  204 ILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSDGRPGENSFYDNTISNTKTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNTFDDANDDLCYKNFES--------SSFASTDTLP 618
            +LDD+ + + SPTSVT KWLL SEL+V  G++FYC G+  GGDCDELRIQSTG  D++EVRGHGGS+YF  T+VTSWDTPNK PQE Y+ GRSFLNCVSE  + ETC G+ KND GECRMDII+SEMGY+G+FD+ESYGLTWKVRGFC D SNP+VF+TTNVYGDIKNS+IHHMYYGMYSYGHQGGVWTNN+MHDNHQYGFDPHDDSDYLTIA             ASKRCNNV+IY NEV  GG +A GIFLHRSSD+ EVY                                                        G       DAPD S+ GRP  N+F +N I+NT  GVKIK +DN VI+ N FTGT  LEF DA  T WS N+       +C  N  S        S+F+S+  +P
Sbjct:    1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSN-GRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSG---VCIDNVTSDDGNSVPPSTFSSSSGVP 364          
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 432 bits (1111), Expect = 2.200e-142
Identity = 242/456 (53.07%), Postives = 293/456 (64.25%), Query Frame = 0
Query:  160 SIRWASGTGLNGRMYLED-------GGCGTMTDLYKSRVESDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEY--ESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSDGRPGENSFYDNTISNTKTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNTFDDANDDLCYKN 605
            SIR+A   G   R+YLE        GGC T+  +++SR        KGP+Y +D D+ ++    TS TG WLLT EL+V  G      G+  GGD DELR+ ST  T F  +R HGGSL F  T V SWDT   SP ED  DGRS+++ +SE   + DETC G  KN  GE RMDI  SE+GYLG++DSESYGLTWKVRGFC DKSNPEVFD  NVYG++ +SDIHHM +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI +NEVYNN  HGIIASKRCN V I  NEVYGG   +AGIFLHRSSD   V  N V+D  DAGLA+LESF+AD+ +NTF N KYG+R S+G  +N   +N     ++Y  Y+Y G+D PD  S GR   N F  N+ S  +  +KIKEAD T    N F      E  DA G V     FD+A ++L   N
Sbjct:   45 SIRYA---GTTARLYLESADNGTTRGGCVTLGQIWESRAG------KGPLYAVDPDSGNVS---TSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNET-FINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVF------EVGDADGLVV---RFDNATENLMQGN 478          
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 430 bits (1106), Expect = 1.410e-141
Identity = 249/493 (50.51%), Postives = 310/493 (62.88%), Query Frame = 0
Query:  143 SPTPVMTIPDECTGTKSSIRWASGTGLNGRMYLED------GGCGTMTDLYKSRVESDGWTPKGPIYILD-DNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDELRIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNCVSEY--ESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGFCADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNHQYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQAAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGIRISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSDGRPGENSFYDNTISNTKTGVKIKEADNTVITGNTF-TGTS---LLEFNDASGTVWSSNT-FDDANDDLCYKNFESSSFASTDTLPPLC 621
            SP   ++ PD  +  + SIR+A   G   R+YLE       GGC T+  +++SR        K P+Y +D D+ D+  + T   G WLLT EL+V  G      GT  GGD DELR+ ST  T +  +R HGGSL F  T V SWDT   SP ED  DGRS+++ VSE   + DETC G  KN  GE RMDI +SE+GYLG+ DSESYGLTWKVRGFC DKSNPE+FD  NVYG++ +SDIHH+ +G+Y+YGHQ G W  NKMHDN  YGFDPHDDSD+LTI +NEVYNN  HGIIASKRCN V I  NEVYGG   +AGIFLHRSSD   V  N V+D  DAGLA+LESF+AD+ +NTF N KYG+R+S+G  +N   +N+    S+Y  YTY GSD PD  S GR   N F  N+ S  +  +KIKEAD T    N F  G +   ++ F+DA  +V   NT  D+ + +L   N       S     P+C
Sbjct:   33 SPNDPISKPDCDSDIEVSIRYA---GTTKRLYLESADGETRGGCATLGQIWESRAG------KAPLYAVDPDSGDVSETET---GTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSET-YINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10342.479.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC73_ECTSI3.580e-22352.96Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus sili... [more]
D8LRM4_ECTSI7.170e-19866.36Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectoca... [more]
A0A6H5JGU8_9PHAE1.860e-19361.61MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7FRR8_ECTSI5.590e-18860.27Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G8D9_ECTSI1.120e-18550.68Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5KWQ2_9PHAE2.500e-16066.38MEP2 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
A0A6H5JNF5_9PHAE7.400e-15454.90MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FIU4_ECTSI2.040e-14956.26Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI2.200e-14253.07Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI1.410e-14150.51Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006626Parallel beta-helix repeatSMARTSM00710pbh1coord: 563..592
e-value: 1700.0
score: 5.6
coord: 364..385
e-value: 2500.0
score: 4.3
coord: 386..408
e-value: 7400.0
score: 1.0
coord: 506..528
e-value: 190.0
score: 10.8
coord: 460..482
e-value: 1800.0
score: 5.4
coord: 483..504
e-value: 17.0
score: 14.3
coord: 410..432
e-value: 5.9
score: 15.9
coord: 434..458
e-value: 60.0
score: 12.5
coord: 541..562
e-value: 610.0
score: 8.8
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 26..118
e-value: 0.0018
score: 20.4
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 30..108
e-value: 9.4E-15
score: 54.6
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 26..118
score: 10.016
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 205..541
e-value: 2.9E-89
score: 301.7
IPR007742Periplasmic copper-binding protein NosD, beta helix domainPFAMPF05048NosDcoord: 364..495
e-value: 8.8E-12
score: 44.8
NoneNo IPR availablePANTHERPTHR24269:SF19coord: 27..152
NoneNo IPR availablePANTHERPTHR24269FAMILY NOT NAMEDcoord: 27..152
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 363..578

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10342contigP-canaliculata_contig10342:972..5022 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10342.479.1mRNA_P-canaliculata_contig10342.479.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10342 388..6341 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10342.479.1 ID=prot_P-canaliculata_contig10342.479.1|Name=mRNA_P-canaliculata_contig10342.479.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=622bp
MVCTGDSDANCGGNYAMRIFTRAMTDDDAIGCYGDSSIDRVFSDKLVDQA
GMNPEVCFDHCNSEGALYYGTQWGEECWCGYDEDDYDRLGLATCDRPCSG
DSTLFCGGTYAMTVYEIDDDKTEEPPSSVPSPVPSGSSMPVSSPTPVMTI
PDECTGTKSSIRWASGTGLNGRMYLEDGGCGTMTDLYKSRVESDGWTPKG
PIYILDDNDDIMYSPTSVTGKWLLTSELFVLRGSVFYCRGTSIGGDCDEL
RIQSTGSTDFHEVRGHGGSLYFEKTLVTSWDTPNKSPQEDYKDGRSFLNC
VSEYESDETCVGQPKNDYGECRMDIIDSEMGYLGWFDSESYGLTWKVRGF
CADKSNPEVFDTTNVYGDIKNSDIHHMYYGMYSYGHQGGVWTNNKMHDNH
QYGFDPHDDSDYLTIANNEVYNNVNHGIIASKRCNNVKIYENEVYGGGAQ
AAGIFLHRSSDSCEVYDNVVYDMQDAGLAILESFDADIHDNTFTNVKYGI
RISLGGGNNNVYDNVFDECSQYGLYTYQGSDAPDASSDGRPGENSFYDNT
ISNTKTGVKIKEADNTVITGNTFTGTSLLEFNDASGTVWSSNTFDDANDD
LCYKNFESSSFASTDTLPPLC*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006626PbH1
IPR002889WSC_carb-bd
IPR012334Pectin_lyas_fold
IPR007742NosD_dom
IPR011050Pectin_lyase_fold/virulence