prot_P-canaliculata_contig102571.398.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig102571.398.1
Unique Nameprot_P-canaliculata_contig102571.398.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length117
Homology
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BLAST of mRNA_P-canaliculata_contig102571.398.1 vs. uniprot
Match: A0A518F164_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518F164_9BACT)

HSP 1 Score: 143 bits (360), Expect = 5.100e-40
Identity = 67/114 (58.77%), Postives = 85/114 (74.56%), Query Frame = 0 
Query:    3 TFEPAEIQPTPQRPRISKNTKTTAKSSIELEAGLHFDPNDFLDSPVTLKYGLTENIEYFIETAPIRVVDLPDDNESGFGDFAFGIRHRFDDGEGGGPKFAYEAVGKIPTSDNPD 116
            T E A++ PTPQRPRISKNTKTT K S+ELEAGL +DPNDF+D+P T KYG +E  E  +ETAP+R  ++ ++ E+G GD AFG RHRF+  E G P F  E VGK+PT+D+ D
Sbjct:   22 TLEQADLTPTPQRPRISKNTKTTTKDSVELEAGLTWDPNDFVDTPATFKYGFSETTEVIVETAPLRRYEVGNETETGIGDLAFGFRHRFEPTEDGAPTFGMEFVGKLPTNDSSD 135
[Close]
BLAST of mRNA_P-canaliculata_contig102571.398.1 vs. uniprot
Match: A0A518EMU7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EMU7_9BACT)

HSP 1 Score: 87.8 bits (216), Expect = 1.030e-18
Identity = 50/114 (43.86%), Postives = 65/114 (57.02%), Query Frame = 0 
Query:    2 TTFEPAEIQPTPQRPRISKNTKTTAKSSIELEAGLHFDPNDFLDSPVTLKYGLTENIEYFIETAPIRVVDLPDDNESGFGDFAFGIRHRFDDGEGGGPKFAYEAVGKIPTSDNP 115
            TT   +    TPQRP +S +T TT +   ELEAG+  D     DSP+TLKYG+T   E     AP R VDL   +E+G GD  F +RHRF +        A +A+ KIPT+D+P
Sbjct:   21 TTVPGSHAPATPQRPTLSSDTSTTPEGRFELEAGVVRDSTISFDSPLTLKYGVTNQTEISAGVAPYRRVDLGATDENGPGDVVFALRHRFREATEDRASLAVQALVKIPTADDP 134
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig102571.398.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A518F164_9BACT5.100e-4058.77Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A518EMU7_9BACT1.030e-1843.86Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig102571contigP-canaliculata_contig102571:210..560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig102571.398.1mRNA_P-canaliculata_contig102571.398.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig102571 210..560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig102571.398.1 ID=prot_P-canaliculata_contig102571.398.1|Name=mRNA_P-canaliculata_contig102571.398.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=117bp
MTTFEPAEIQPTPQRPRISKNTKTTAKSSIELEAGLHFDPNDFLDSPVTL
KYGLTENIEYFIETAPIRVVDLPDDNESGFGDFAFGIRHRFDDGEGGGPK
FAYEAVGKIPTSDNPDG
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