prot_P-canaliculata_contig101867.271.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig101867.271.1
Unique Nameprot_P-canaliculata_contig101867.271.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length143
Homology
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BLAST of mRNA_P-canaliculata_contig101867.271.1 vs. uniprot
Match: UPI00167BE3AF (hypothetical protein n=1 Tax=Streptomyces aurantiogriseus TaxID=66870 RepID=UPI00167BE3AF)

HSP 1 Score: 58.2 bits (139), Expect = 3.910e-7
Identity = 44/112 (39.29%), Postives = 57/112 (50.89%), Query Frame = 0 
Query:   41 VEIADAVDIQKLQDEKLDLTGGTMTGDIILAGAPSSALGATPKSFVEE-------------------QDALKVSKAGDVMSGNLDMGGNELVGLPATPSATGATSVEYVDGL 133
            V++ D +D   L   KLDLTGGTM G II +G PS +  A  K++V+                    Q ALKVSKAGD M+G L + GN     P +P    A + +YVD L
Sbjct:   90 VDLGDQID--SLSTNKLDLTGGTMLGPIITSGVPSVSGEAVNKAYVDSEVSSGDAATFTSAQAYTDAQAALKVSKAGDAMTGPLTLPGN-----PTSP--LHAATKQYVDAL 192
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101867.271.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00167BE3AF3.910e-739.29hypothetical protein n=1 Tax=Streptomyces aurantio... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig101867contigP-canaliculata_contig101867:110..538 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig101867.271.1mRNA_P-canaliculata_contig101867.271.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig101867 110..538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig101867.271.1 ID=prot_P-canaliculata_contig101867.271.1|Name=mRNA_P-canaliculata_contig101867.271.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=143bp
GFGLPVKTTAERTAYTPSRTGYQVYDTDLGKAFVWVNNAWVEIADAVDIQ
KLQDEKLDLTGGTMTGDIILAGAPSSALGATPKSFVEEQDALKVSKAGDV
MSGNLDMGGNELVGLPATPSATGATSVEYVDGLAANYATAAQG
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