prot_P-canaliculata_contig101824.269.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig101824.269.1
Unique Nameprot_P-canaliculata_contig101824.269.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length145
Homology
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BLAST of mRNA_P-canaliculata_contig101824.269.1 vs. uniprot
Match: A0A6A6PIS3_9PEZI (Uncharacterized protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PIS3_9PEZI)

HSP 1 Score: 53.9 bits (128), Expect = 1.360e-5
Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 0 
Query:   93 RRALRRTCPAEGEENAVDGDVGALERDGRTWVARRAGPGGLDTTPPREGRFER 145
            RR   R    E  EN ++G +  LE D R W+ RR   GGL++TPPREGRFER
Sbjct:  798 RRPTHRQARHEEVENELEGHLDGLEEDRRLWMDRREVGGGLESTPPREGRFER 850
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig101824.269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6A6PIS3_9PEZI1.360e-550.94Uncharacterized protein n=1 Tax=Neohortaea acidoph... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig101824contigP-canaliculata_contig101824:1..555 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig101824.269.1mRNA_P-canaliculata_contig101824.269.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig101824 1..555 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig101824.269.1 ID=prot_P-canaliculata_contig101824.269.1|Name=mRNA_P-canaliculata_contig101824.269.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=145bp
PAAPAAPPPSRPRAPSSPGAPPIKRKPVPPPPSSPPLCVYHDARPRTSVD
ADARASGRRRGTGVGGEVEVEVGLRSSPPEVPVVVGVAAVPPRRALRRTC
PAEGEENAVDGDVGALERDGRTWVARRAGPGGLDTTPPREGRFER
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