prot_P-canaliculata_contig10179.267.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig10179.267.1
Unique Nameprot_P-canaliculata_contig10179.267.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length155
Homology
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BLAST of mRNA_P-canaliculata_contig10179.267.1 vs. uniprot
Match: A0A6H5LBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBM3_9PHAE)

HSP 1 Score: 50.8 bits (120), Expect = 1.440e-5
Identity = 21/37 (56.76%), Postives = 27/37 (72.97%), Query Frame = 0 
Query:    7 RRCAGDGCARHPCYGMASRRKAEYCAEHALAGMINVS 43
            RRCA + C +HP YG+   RKAE+CA HAL GM++ S
Sbjct:   15 RRCAHEDCVKHPTYGVPGTRKAEFCAPHALDGMVSGS 51
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig10179.267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5LBM3_9PHAE1.440e-556.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig10179contigP-canaliculata_contig10179:6619..7083 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig10179.267.1mRNA_P-canaliculata_contig10179.267.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig10179 6581..7250 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig10179.267.1 ID=prot_P-canaliculata_contig10179.267.1|Name=mRNA_P-canaliculata_contig10179.267.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=155bp
MIYVVSRRCAGDGCARHPCYGMASRRKAEYCAEHALAGMINVSSKCCTVD
GCSTILSFGVAGSRKPKYCSNHAPEDMVNVVSRRCISDGCFKQSYHGIAG
SRKPEYCAEHAKEGMVNVVSKRCADGGCIKHPNYGVAGSGKREYCAEHAL
EGII*
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