prot_P-canaliculata_contig9987.24102.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9987.24102.1
Unique Nameprot_P-canaliculata_contig9987.24102.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length181
Homology
BLAST of mRNA_P-canaliculata_contig9987.24102.1 vs. uniprot
Match: D7G9B2_ECTSI (Magnesium and cobalt transport protein CorA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9B2_ECTSI)

HSP 1 Score: 322 bits (825), Expect = 5.070e-104
Identity = 158/180 (87.78%), Postives = 168/180 (93.33%), Query Frame = 0
Query:    1 MDSIVDDVFPIMQHFQKWLVELQGKLHSSDDCPSLEVVRAIQQISRDMHMITYYLRPMKMVAIQLITDLPGNDMDLKRHLEDLRDHLLMLEEQAMRMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLSSVFGMNFKFMPELNWRYSYASFWVLVALLALFIFTLYKRHKWL 180
            MDSIVDDVFPIMQ FQ WLV+LQ +LHS D  PSL++VRAIQQISRDMHMIT+YLRPMK+VA QLITDLPGND DLKRHLEDLRDHLLMLEEQA+RMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFL+ VFGMNFKFMPELNWRYSYASFWVLVALLA   +T+YKRHKWL
Sbjct:  511 MDSIVDDVFPIMQQFQAWLVQLQEQLHSEDAGPSLDIVRAIQQISRDMHMITFYLRPMKVVAAQLITDLPGNDADLKRHLEDLRDHLLMLEEQALRMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLTGVFGMNFKFMPELNWRYSYASFWVLVALLAFSSYTVYKRHKWL 690          
BLAST of mRNA_P-canaliculata_contig9987.24102.1 vs. uniprot
Match: A0A6H5L3P2_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3P2_9PHAE)

HSP 1 Score: 322 bits (825), Expect = 4.200e-102
Identity = 158/180 (87.78%), Postives = 168/180 (93.33%), Query Frame = 0
Query:    1 MDSIVDDVFPIMQHFQKWLVELQGKLHSSDDCPSLEVVRAIQQISRDMHMITYYLRPMKMVAIQLITDLPGNDMDLKRHLEDLRDHLLMLEEQAMRMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLSSVFGMNFKFMPELNWRYSYASFWVLVALLALFIFTLYKRHKWL 180
            MDSIVDDVFPIMQ FQ WLV+LQ +LHS D  PSL++VRAIQQISRDMHMIT+YLRPMK+VA QLITDLPGND DLKRHLEDLRDHLLMLEEQA+RMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFL+ VFGMNFKFMPELNWRYSYASFWVLVALLA   +T+YKRHKWL
Sbjct:  713 MDSIVDDVFPIMQQFQAWLVQLQEQLHSEDAGPSLDIVRAIQQISRDMHMITFYLRPMKVVATQLITDLPGNDADLKRHLEDLRDHLLMLEEQALRMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLTGVFGMNFKFMPELNWRYSYASFWVLVALLAFSSYTVYKRHKWL 892          
BLAST of mRNA_P-canaliculata_contig9987.24102.1 vs. uniprot
Match: A0A835YKG6_9STRA (Cora-like Mg2+ transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKG6_9STRA)

HSP 1 Score: 228 bits (580), Expect = 2.210e-67
Identity = 106/174 (60.92%), Postives = 142/174 (81.61%), Query Frame = 0
Query:    8 VFPIMQHFQKWLVELQGKLHSSDDCPSLEVVRAIQQISRDMHMITYYLRPMKMVAIQLITDLP-GNDMDLKRHLEDLRDHLLMLEEQAMRMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLSSVFGMNFKFMPELNWRYSYASFWVLVALLALFIFTLYKRHKWL 180
            +FPI+QHF +WLV+LQGK+ S  + P L VV+AIQQI+RDM+M+ +YLRPMK    QL+ +LP  +D +L+RHLEDL DH+++LEEQA RM+ WSRSLN D++NEQ HRMN V+Y+LTMVT+AF+P QFL+ VFGMNFK+MPEL+W+YSY  FW L+  LA F+F  Y++++WL
Sbjct:  573 MFPIVQHFHRWLVQLQGKVQSEKETP-LAVVKAIQQINRDMNMLQFYLRPMKAAVAQLVAELPDADDKNLRRHLEDLLDHVVVLEEQAYRMTAWSRSLNDDFMNEQTHRMNNVMYLLTMVTTAFLPGQFLTGVFGMNFKYMPELDWKYSYLIFWALIFALATFVFNFYRKNRWL 745          
BLAST of mRNA_P-canaliculata_contig9987.24102.1 vs. uniprot
Match: A0A835Z9I1_9STRA (Cora-like Mg2+ transporter protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9I1_9STRA)

HSP 1 Score: 191 bits (486), Expect = 3.900e-53
Identity = 94/170 (55.29%), Postives = 128/170 (75.29%), Query Frame = 0
Query:    1 MDSIVDDVFPIMQHFQKWLVELQGKLHSSDDCPSLEVVRAIQQISRDMHMITYYLRPMKMVAIQLITDLPGNDM--------DLKRHLEDLRDHLLMLEEQAMRMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLSSVFGMNFKFMPELNWRYSYASFWVL 162
            +D++VD +FPI+QHF   LV LQ  +   +D P L VV+ IQQ++RDM+ + +YLRP++    QL+ DLP  D         DL+RHL DL DH+++LEEQAMRM++WS SLN+D++NEQ H+MN+V+ +LTMVT+A +P QFL+ VFGMNF++MPELNW YSYA FWVL
Sbjct:  490 VDALVDGMFPIVQHFHTQLVGLQESIQGEEDTP-LTVVKDIQQVNRDMNALQFYLRPLRPAVAQLMNDLPAFDAAADAAAREDLRRHLMDLLDHVVVLEEQAMRMASWSASLNEDYLNEQGHKMNKVMTVLTMVTTACLPGQFLAGVFGMNFRYMPELNWHYSYALFWVL 658          
BLAST of mRNA_P-canaliculata_contig9987.24102.1 vs. uniprot
Match: A0A0D2VNK3_CAPO3 (Uncharacterized protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2VNK3_CAPO3)

HSP 1 Score: 159 bits (401), Expect = 9.110e-42
Identity = 78/182 (42.86%), Postives = 122/182 (67.03%), Query Frame = 0
Query:    1 MDSIVDDVFPIMQHFQKWLVELQGKLHSSDDCPSLEVVRAIQQISRDMHMITYYLRPMKMVAIQLITDLP-GND-MDLKRHLEDLRDHLLMLEEQAMRMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLSSVFGMNFKFMPELNWRYSYASFWVLVALLALFIFTLYKRHKWL 180
            +D IVDDVFP+++ F   L +LQ  +       +L   + +Q + R+++ + ++L  +  V  +L+ +LP G D +D+++H+EDL+DH+  L+EQ   M  W++SLN D +NEQQ RMNQV+Y+LTMVT+ F+P QF++ V+GMNF+ +PEL WRYSY  FW++V +L       +KR  WL
Sbjct:  688 VDGIVDDVFPVLKAFHYQLRQLQTLVLGRKQT-TLATAKELQHLHRELNNLVFWLHSLSSVINRLLEELPQGTDALDIRKHMEDLKDHVQTLQEQTNSMMQWAKSLNDDLLNEQQFRMNQVMYMLTMVTTTFVPLQFITGVYGMNFETLPELTWRYSYLVFWIIVLMLLTIALWFFKRRGWL 868          
BLAST of mRNA_P-canaliculata_contig9987.24102.1 vs. uniprot
Match: I2CPD3_NANGC (Magnesium and cobalt transport protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPD3_NANGC)

HSP 1 Score: 137 bits (344), Expect = 1.450e-35
Identity = 70/182 (38.46%), Postives = 118/182 (64.84%), Query Frame = 0
Query:    1 MDSIVDDVFPIMQHFQKWLVELQGKLHSSDDCPSLEVVRAIQQISRDMHMITYYLRPMKMVAIQLITDLPGN--DMDLKRHLEDLRDHLLMLEEQAMRMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLSSVFGMNFKFMPELNWRYSYASFWVLVALLALFIFTLYKRHKWL 180
            +D+IVD++FPI++  ++ L  L   +   +   SL+ +  IQ + R+++++  +L  +  V  +L  +L  +  D DL++HL DL DH+  L+EQ   M  W++SLN +++NEQQ+RMNQV+Y+LTMVT+  +PAQFL+ VFGMNF++ P LN  + +  FWV+ +     I  +++  +WL
Sbjct:  202 VDAIVDELFPILRLIRRKLKSLHADVTRGNKRISLKTIHLIQHLIREINLLLLWLSSLGTVVARLPAELLFHRPDYDLEKHLGDLVDHVAALKEQTHSMIGWAKSLNDEYLNEQQYRMNQVIYLLTMVTTLMLPAQFLTGVFGMNFEYFPLLNEPWGFPVFWVMTSSAIGLILYIFRAKRWL 383          
BLAST of mRNA_P-canaliculata_contig9987.24102.1 vs. uniprot
Match: A0A4D9CQ61_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CQ61_9STRA)

HSP 1 Score: 137 bits (344), Expect = 4.310e-34
Identity = 70/182 (38.46%), Postives = 118/182 (64.84%), Query Frame = 0
Query:    1 MDSIVDDVFPIMQHFQKWLVELQGKLHSSDDCPSLEVVRAIQQISRDMHMITYYLRPMKMVAIQLITDLPGN--DMDLKRHLEDLRDHLLMLEEQAMRMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLSSVFGMNFKFMPELNWRYSYASFWVLVALLALFIFTLYKRHKWL 180
            +D+IVD++FPI++  ++ L  L   +   +   SL+ +  IQ + R+++++  +L  +  V  +L  +L  +  D DL++HL DL DH+  L+EQ   M  W++SLN +++NEQQ+RMNQV+Y+LTMVT+  +PAQFL+ VFGMNF++ P LN  + +  FWV+ +     I  +++  +WL
Sbjct:  609 VDAIVDELFPILRLIRRKLKSLHADVTRGNKRISLKTIHLIQHLIREINLLLLWLSSLGTVVARLPAELLFHRPDYDLEKHLGDLVDHVAALKEQTHSMIGWAKSLNDEYLNEQQYRMNQVIYLLTMVTTLMLPAQFLTGVFGMNFEYFPLLNEPWGFPVFWVMTSSAIGLILYIFRAKRWL 790          
BLAST of mRNA_P-canaliculata_contig9987.24102.1 vs. uniprot
Match: A0A7S4C8W9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4C8W9_9EUGL)

HSP 1 Score: 123 bits (309), Expect = 1.750e-30
Identity = 65/188 (34.57%), Postives = 110/188 (58.51%), Query Frame = 0
Query:    1 MDSIVDDVFPIMQHFQKWLVELQGKLHS-------SDDCPSLEVVRAIQQISRDMHMITYYLRPMKMVAIQLITDLPGNDM-DLKRHLEDLRDHLLMLEEQAMRMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLSSVFGMNFKFMPELNWRYSYASFWVLVALLALFIFTLYKRHKWL 180
            MD  VD +FPIM  F+  L E Q  L         + +  ++ ++R +Q  S++M+ + + LRP+    + L      N + +L+ + +DLRDH+  + +    M TW+R+L  D+   QQ  MN+ +Y+LT++T+ F+PA FL+ +FGMNF++MP LNW Y + +FW ++  + + I  L K+  WL
Sbjct:  191 MDKEVDHLFPIMNKFRMQLEECQRVLEDRRPSGTGNPNASNVAILRVLQCTSQEMNNLVFVLRPLASAVMALTEYARYNGLTELQWYFDDLRDHVSTILDYVASMQTWARNLKDDYSYIQQDNMNRTMYVLTLITALFVPANFLTGLFGMNFEYMPWLNWEYGFWAFWGVIVCVNVVIVYLIKKLSWL 378          
BLAST of mRNA_P-canaliculata_contig9987.24102.1 vs. uniprot
Match: A0A1M6ETC4_9FLAO (Magnesium transport protein CorA n=1 Tax=Pseudozobellia thermophila TaxID=192903 RepID=A0A1M6ETC4_9FLAO)

HSP 1 Score: 104 bits (259), Expect = 2.450e-23
Identity = 54/181 (29.83%), Postives = 107/181 (59.12%), Query Frame = 0
Query:    1 MDSIVDDVFPIMQHFQKWLVELQGKLHSSDDCPSLEVVRAIQQISRDMHMITYYLRPMKMVAIQLI-TDLPGNDMDLKRHLEDLRDHLLMLEEQAMRMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLSSVFGMNFKFMPELNWRYSYASFWVLVALLALFIFTLYKRHKWL 180
            +D+IVD+ F +++H  + +  L+  ++++   P+ EV + IQ + +++  +  ++ P++ +  +LI ++ P    D K  L D+ DH + + E        S SL + +++   ++MN+V+ +LT++ S F+P  F++ ++GMNF  MPEL+W+Y Y   W  + LL + +   +KR KWL
Sbjct:  190 LDAIVDNYFVVLEHLNERIEHLEELVYAN---PTNEVAQEIQILKKEVLKVRRWISPVRELVSRLIDSEHPLISKDTKVFLRDVLDHSIEINESLQIYREMSMSLMEMYMSNMSNKMNEVMKVLTIMASIFIPLTFIAGIYGMNFDHMPELHWKYGYPMAWGFMILLFIALLIYFKRKKWL 367          
BLAST of mRNA_P-canaliculata_contig9987.24102.1 vs. uniprot
Match: A0A6N4X317_9BACT (Magnesium transport protein CorA n=2 Tax=Lentimonas TaxID=417293 RepID=A0A6N4X317_9BACT)

HSP 1 Score: 103 bits (256), Expect = 9.390e-23
Identity = 57/181 (31.49%), Postives = 103/181 (56.91%), Query Frame = 0
Query:    1 MDSIVDDVFPIMQHFQKWLVELQGKLHSSDDCPSLEVVRAIQQISRDMHMITYYLRPMKMVAIQLI-TDLPGNDMDLKRHLEDLRDHLLMLEEQAMRMSTWSRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLSSVFGMNFKFMPELNWRYSYASFWVLVALLALFIFTLYKRHKWL 180
            +DSIVD +FPI + +   L EL+ ++    + P+ E  +++  +  D+      L  ++ V   L  T+ P    DLK  L D++DH + L +        + SL   +     ++MN+++ +LT+++S F+P  FL+ V+GMNFK++PELNW+YSYA+FW++  +    +   ++R  W+
Sbjct:  217 LDSIVDHLFPIQESYTNDLEELEDRIL---EAPTAECQQSLFSMKHDLSRQRRALWALREVIDGLYRTESPLIGHDLKPFLRDVQDHTIQLIDLISNARDTAASLGDLYQTSVSNKMNEIMKVLTLMSSFFIPMTFLAGVYGMNFKYIPELNWKYSYATFWLICLISCTSLLIFFRRKGWI 394          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9987.24102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9B2_ECTSI5.070e-10487.78Magnesium and cobalt transport protein CorA n=1 Ta... [more]
A0A6H5L3P2_9PHAE4.200e-10287.78EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A835YKG6_9STRA2.210e-6760.92Cora-like Mg2+ transporter protein-domain-containi... [more]
A0A835Z9I1_9STRA3.900e-5355.29Cora-like Mg2+ transporter protein-domain-containi... [more]
A0A0D2VNK3_CAPO39.110e-4242.86Uncharacterized protein n=1 Tax=Capsaspora owczarz... [more]
I2CPD3_NANGC1.450e-3538.46Magnesium and cobalt transport protein (Fragment) ... [more]
A0A4D9CQ61_9STRA4.310e-3438.46Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S4C8W9_9EUGL1.750e-3034.57Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A1M6ETC4_9FLAO2.450e-2329.83Magnesium transport protein CorA n=1 Tax=Pseudozob... [more]
A0A6N4X317_9BACT9.390e-2331.49Magnesium transport protein CorA n=2 Tax=Lentimona... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002523Mg2+ transporter protein, CorA-like/Zinc transport protein ZntBPFAMPF01544CorAcoord: 1..174
e-value: 1.4E-30
score: 106.7
NoneNo IPR availableGENE3D1.20.58.340coord: 108..180
e-value: 2.2E-22
score: 80.9
NoneNo IPR availableGENE3D1.20.58.340coord: 1..99
e-value: 9.5E-9
score: 37.1
NoneNo IPR availablePANTHERPTHR46494:SF1coord: 1..180
NoneNo IPR availablePANTHERPTHR46494FAMILY NOT NAMEDcoord: 1..180
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 143..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..142
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 175..180
NoneNo IPR availableSUPERFAMILY143865CorA soluble domain-likecoord: 1..94
NoneNo IPR availableSUPERFAMILY144083Magnesium transport protein CorA, transmembrane regioncoord: 115..177
NoneNo IPR availableTMHMMTMhelixcoord: 156..174
NoneNo IPR availableTMHMMTMhelixcoord: 119..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9987contigP-canaliculata_contig9987:3613..8395 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9987.24102.1mRNA_P-canaliculata_contig9987.24102.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9987 95..10697 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9987.24102.1 ID=prot_P-canaliculata_contig9987.24102.1|Name=mRNA_P-canaliculata_contig9987.24102.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=181bp
MDSIVDDVFPIMQHFQKWLVELQGKLHSSDDCPSLEVVRAIQQISRDMHM
ITYYLRPMKMVAIQLITDLPGNDMDLKRHLEDLRDHLLMLEEQAMRMSTW
SRSLNKDWVNEQQHRMNQVVYILTMVTSAFMPAQFLSSVFGMNFKFMPEL
NWRYSYASFWVLVALLALFIFTLYKRHKWL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002523MgTranspt_CorA/ZnTranspt_ZntB