prot_P-canaliculata_contig99627.24076.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig99627.24076.1
Unique Nameprot_P-canaliculata_contig99627.24076.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length116
Homology
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BLAST of mRNA_P-canaliculata_contig99627.24076.1 vs. uniprot
Match: UPI0013EA2E4C (hypothetical protein n=1 Tax=unclassified Paludisphaera TaxID=2624067 RepID=UPI0013EA2E4C)

HSP 1 Score: 78.2 bits (191), Expect = 2.610e-16
Identity = 36/88 (40.91%), Postives = 55/88 (62.50%), Query Frame = 0 
Query:    4 IKLKIHVVFYKDSLGDWIAHCLEMDLCGHGASQVSAVKMLNDAIAMQIEFSLAGDNPENIFSPADAKFFQMFAEGDDKLVGNLEVTIE 91
            ++L + +VFY++    W+AHCLE DL G G ++  A+  L DA  +Q E S   DNP N FSPA+ ++F+M+A G D     ++V+ E
Sbjct:    7 LRLSLRIVFYRED-ESWVAHCLETDLVGVGETKREAMATLWDATTLQFEASREWDNPANFFSPAEGRYFEMYARGRDVATAEMDVSAE 93
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99627.24076.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI0013EA2E4C2.610e-1640.91hypothetical protein n=1 Tax=unclassified Paludisp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig99627contigP-canaliculata_contig99627:492..839 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig99627.24076.1mRNA_P-canaliculata_contig99627.24076.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig99627 492..860 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig99627.24076.1 ID=prot_P-canaliculata_contig99627.24076.1|Name=mRNA_P-canaliculata_contig99627.24076.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=116bp
MPEIKLKIHVVFYKDSLGDWIAHCLEMDLCGHGASQVSAVKMLNDAIAMQ
IEFSLAGDNPENIFSPADAKFFQMFAEGDDKLVGNLEVTIEEEYDSFKFQ
GSESRQYSGGTTLAF*
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