mRNA_P-canaliculata_contig99527.24062.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig99527.24062.1
Unique NamemRNA_P-canaliculata_contig99527.24062.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig99527.24062.1 vs. uniprot
Match: A0A518EKI0_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EKI0_9BACT)

HSP 1 Score: 214 bits (546), Expect = 1.400e-60
Identity = 147/368 (39.95%), Postives = 194/368 (52.72%), Query Frame = 1
Query:    1 SESAVLSLGVVGHGSTAPPLLAILTDSKEGRDLMGKERVSTRAQAFAAFGLGLLANNVDSPDLHQRVALGLMDALDSKVMREDVHVAALIALGLTPVPMTPHVPAPDLRKHRNIESAVSRSGQLAWLARRLTGPQSES----LSSAARTHGLVALGRLARDSWSGSRAKAMETLLEAATSRDADKHVRAGAWIGLGRVASGSSQPGDVAALKALAKGMLEGQPVERRFAAISLAQASSR-----LP------------ADGSPLLGYATARRALQLRLASAPTQDEPWIAMALGIQAHALHHAGVAGTSATAGALLDRLRSERGTSQIGAFAVAVALSHVGVETSPADAAKALLMEKFERTKDPAARG 1041
            SE+A LSLG++G  +   PLL +L  S+EG  L+GK  V  R  AFAAFGLGL+A+  D P L QR+A  LM+A+ +     ++  AA +A+GL PVP    VP    R   +    V+R  Q+ WL  RL   +S      L   AR HG+ ALGRL  D+    R + + TLL  ATS D+  H+R  AWIGLG V +  S   D   ++ L + +  G  +E+ FA I+LA A+SR     LP            A G    G  T RRAL  RLA       PW ++ALGIQ   L  AG +     A  L DR+R+ER  + IGA+ +A AL+H G +      A   +   F RTKDP ARG
Sbjct:  141 SETAALSLGILGEDAALQPLLDLLASSEEGGRLVGKTVVPVRTSAFAAFGLGLMAHERDEPALRQRIAAALMEAMAADHRSNEIPTAAALAIGLCPVPDKLTVPDRATRASTHAHDVVAREAQVRWLVERLDPERSRGRGDLLPRLARVHGITALGRLGSDAPPHVRERVIRTLLGVATSGDSSVHLRTAAWIGLGEVLTAGSSSLDREGMRTLMEALKTGNVLEQHFAGIALALATSREGSDPLPTEAAADDGTVDAAKGDRWAGLETGRRALLQRLARGRADSLPWFSLALGIQNWHLQRAGQSNHPVAALTLRDRVRNERSAAFIGAYGIACALAHEGSDEESRSRAGDQIHGAFRRTKDPLARG 508          
BLAST of mRNA_P-canaliculata_contig99527.24062.1 vs. uniprot
Match: A0A518F0D5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518F0D5_9BACT)

HSP 1 Score: 177 bits (448), Expect = 2.850e-46
Identity = 125/357 (35.01%), Postives = 184/357 (51.54%), Query Frame = 1
Query:    1 SESAVLSLGVVGHGSTAPPLLAILTDSKEGRDLMGKERVSTRAQAFAAFGLGLLANNVDSPDLHQRVALGLMDALDSKVMREDVHVAALIALGLTPVPMTPHVPAPDLRKHRNIESAVSRSGQLAWLARRLTGPQSESL--SSAARTHGLVALGRLARDSWSGSRAKAMETLLEAATSRDADKHVRAGAWIGLGRVASGSSQPGDVAALKALAKGMLEGQPVERRFAAISLAQASSRLPADGSPLLGYATARRALQLRLASAPTQDEPWIAMALGIQAHALHHA--GVAGTSATAGALLDR------LRSERGTSQIGAFAVAVALSHVGVETSPADAAKALLMEKFERTKDPAARG 1041
            SE+A L+LG+ G G++   L  +L  ++ G  L+G+  V  R +AFAAFGLG+LA +       Q VA  L+D L +     +V  AA++ALG   +P+   +P   LR H ++E+ VS +G   WL  RL   + +S   S   R   L  L + A D  +  R      L   A+ R     VR+ A + LG +A       D A+++ L + M  GQP+ERRFAA+SLAQAS+R      P    + A + L+ +       + PW A+ALG+QA  LH A  G  G  A A  LL R      L ++R  + IGA+A+  AL H G + +    A  +++E F R  +P A+G
Sbjct:  214 SETAALALGIFGEGTSFETLAELLDGTEAGAALLGRGEVPDRTRAFAAFGLGVLAFDTADVARQQEVAARLLDTLQTPSTSAEVPAAAMLALGQCKLPLAVTLPPAALRSHPDVEALVSSAGMARWLLTRLGTSERDSTITSPKERAFCLTTLAKFASDRDAALRDDVQRRLRTEASDRRRSSDVRSAALVALGELARSGKGEEDEASIRFLERMMATGQPMERRFAAMSLAQASARAGFGDDPFQSASAAAQLLRTQSRKGSCLERPWAALALGVQAFQLHQASAGAPGVPAPARVLLRRKELLAELANQRNVTTIGAYALGAALLHKGADPAARGKAGEVMLEAFRRIGEPEAKG 570          
BLAST of mRNA_P-canaliculata_contig99527.24062.1 vs. uniprot
Match: A0A523PGH1_9BACT (HEAT repeat domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PGH1_9BACT)

HSP 1 Score: 130 bits (327), Expect = 5.740e-30
Identity = 109/352 (30.97%), Postives = 171/352 (48.58%), Query Frame = 1
Query:    4 ESAVLSLGVVGHGSTAPPLLAILTDSKEGRDLMGKERVSTRAQAFAAFGLGLLANNVDSPDLHQRVALGLMDALDSKVMR-EDVHVAALIALGLTPVPMTPHVPAPDLRKHRNIESAVSRSGQLAWLARRLTGPQSESLSSAARTHGLVALGRLARDSWSGSRAK----AMETLLEAATSRDADKHV-RAGAWIGLGRVASGSSQPGDVAALKALAKGMLEGQPVERRFAAISLAQASSRLPADGSPLLGYATARRALQLRLASAPTQDEPWIAMALGIQAHALHHAGVAGTSATAGALLDRLRSERGTSQIGAFAVAVALSHVGVETSPADA-AKALLMEKFERTKDPAAR 1038
            ++A ++LGV+G  S  P L  +  D+K GR+++G + V  R +AFAA+GLGL+       D+ +R+   L+  L++  M  ED+ VAA++A+GL P+ +     A    +    +   S   Q+ +L R  T  +     +  R H    L RL     +G  A+      E L+++      +  V R  A + LG V      P D     AL +    G P+++R+A ++LAQ  SR     +P  G  +AR+ L   LA A    +PW  +ALG+    LH AG   +S  + AL   L+S +  S +GA+ VA  L          DA A+AL++ K    KD +AR
Sbjct:  118 DTAAVALGVLGSESLYPLLRDVALDTKAGREIVGNDVVGERQRAFAAYGLGLIGQATADADVRRRIVADLVVLLETPGMATEDLKVAAMVAMGLVPLEVVEGTAACYCGECEVADPHTSLQAQVTYLMRYFTAKKE--FDTLVRAHTATTLARLIEAQPAGMPAELKMGVAEVLVDSLEKSAREPEVIRESAVLALGLVGDADDDPVDGWIRWALNRAAGHGDPMQKRYALVALAQVGSRPGRGDAPYAGTPSARKDLLHHLAHAKKSVKPWAGLALGVMGFHLHEAGQPLSSDASLALRTALKSSKSASDLGAYGVACGLRR--------DAKAQALMLAKISAVKDESAR 459          
BLAST of mRNA_P-canaliculata_contig99527.24062.1 vs. uniprot
Match: A0A2E5X2T0_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X2T0_9BACT)

HSP 1 Score: 109 bits (272), Expect = 9.280e-23
Identity = 105/358 (29.33%), Postives = 167/358 (46.65%), Query Frame = 1
Query:    4 ESAVLSLGVVGHGSTAPPLLAILTDSKEGRDLMGKER-VSTRAQAFAAFGLGLLANNVDSPDLHQRVALGLMDALDSKVMR--EDVHVAALIALGLTPVPMTPHV---PAPDLRKHRN-----IESAVSRSGQLAWLARRLTGPQSESLSSAARTHGLVALGRLARDSWSGSRAKAMETLLEAATSR-DADKHVRAGAWIGLGRVASGSSQPGDVAALKALAKGMLEGQPVERRFAAISLAQASSRLPADGSPLLGYATARRALQLRLASAPTQDEPWIAMALGIQAHALHHAGVAGTSATAGALLDRLRSERGTSQIGAFAVAVALSHVGVETSPADAAKALLMEKFERTKDPAARG 1041
            E+A ++LG++ +  +   L  + TD+ EGR + G E  ++ R +AFA FGLGL+ N  + P++ +R+   L   L+ +      D+ VAALI+LGL P+    H+   PA +L K  +      + A SR  QL +L   L   +   L    R H   AL RL   +    R K+ E +L     R    K +R  A + LG++        D    +AL   M +     + F+ IS+AQ +   P +G    G +  RR L   L+   ++ +PW A+A+G+        G   ++ T  AL    R E   +  GA+A+       GV       +K +L+EK ++  D  ARG
Sbjct:   33 ETAAVALGILANPESIDLLEQLATDAPEGRKVTGDESGINYRTRAFATFGLGLIGNRTEDPEVRKRLVTTLHGILEDREDHPTRDIRVAALISLGLVPIEPI-HIALKPASELAKGEDPYVLGTDPARSREDQLHYLINYLRSDRKHYLI---RAHAPSALSRLLVGAPDELRVKSAEAILINCGKRAKGQKELRQSAVLALGKIGDLDDDQIDKDIRQALYDSMGDADLQVKNFSTISVAQLAGN-PTEGDIDAGLSDIRRHLMTTLSRGKSRVKPWAALAIGVMEEKRDGLGHPMSADTLEALRTYFRKEGSPADAGAYAI-------GVGICKDQESKPILLEKLDKFTDDEARG 378          
BLAST of mRNA_P-canaliculata_contig99527.24062.1 vs. uniprot
Match: A0A2E5X634_9BACT (Uncharacterized protein n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X634_9BACT)

HSP 1 Score: 107 bits (267), Expect = 5.860e-22
Identity = 94/324 (29.01%), Postives = 151/324 (46.60%), Query Frame = 1
Query:    4 ESAVLSLGVVGHGSTAPPLLAILTDSKEGR---DLMGKERVSTRAQAFAAFGLGLLANNVDSPDLHQRVALGLMDALD-SKVMREDVHVAALIALGLTPVPMTPHVPAPDLRKHRNIESAVSRSGQLAWLARRLTGPQSESLSSAARTHGLVALGRLARDSWSGS----RAKAMETLLEA-ATSRDADKHVRAGAWIGLGRVASGSSQPGDVAALKALAKGMLEGQPVERRFAAISLAQASSRLPADGSPLLGYATARRALQLRLASAPTQDEPWIAMALGIQAHALHHAGVAGTSATAGALLDRLRSERGTSQIGAFAVAVAL 948
             +A LS+GV+ +   AP L ++L D+ E R   +L   E +S   +A AA+GL  +       +L + +   L+  L+  +    D+ VAA+ A+GLTP+P+     A         E   SR  Q+ WL R L   + E+  + AR H   A+ RL +D+   +    +    ET++++ A S    + V     +GLG +      P DV    +L   + +   + RRFA ISLA+  +R         G A  R+ L  +LA      +PW  +ALG+  H L   GV   +  A AL   ++  +    +GA+A+A  L
Sbjct:  125 RTAALSMGVLAYEPAAPLLRSVLLDTPEARQSLELEEGEAISADLRASAAYGLAFIGRQTSDRELRKSIVEDLVTILELEEQSTPDLKVAAVTAMGLTPLPVVDGADACYCGTCEVDEPGTSRQAQVTWLMR-LFNDKKET-PALARAHTATAMARLLQDAPDNTPKELKIGVAETMIDSLARSARETEEVHQACVLGLGLLGDADDDPVDVWIRSSLRNQLRDSDEMSRRFALISLAKVGARPGTGDGAWAGTAGVRKELTHQLARGKKHMKPWAGVALGVFGHDLMELGVKPDAGVATALRSMIKRAKKPETLGAYALAAGL 446          
BLAST of mRNA_P-canaliculata_contig99527.24062.1 vs. uniprot
Match: A0A2E6D9Z7_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E6D9Z7_9BACT)

HSP 1 Score: 99.4 bits (246), Expect = 2.780e-19
Identity = 92/296 (31.08%), Postives = 140/296 (47.30%), Query Frame = 1
Query:    1 SESAVLSLGVVGHGSTAPPLLAILTDSKEGRDLMGKERVSTRAQAFAAFGLGLLANNVDSPDLHQRVALGLMDALDSK-VMREDVHVAALIALGLTPVPMTPHVP------APDLRKHRNIESAVSRSGQLAWLARRLTGPQSESLSSAAR-----THGLVALGRLARDSWSGSRAKAMETLLEAATSR-DADKHVRAGAWIGLGRVASGSSQPGDVA---ALKALAKGMLEGQPVERRFAAISLAQASSRLPADG-SPLLGYATARRALQLRLASAPTQDEPWIAMALGIQAHAL 837
            +E+A ++LG++ +  +   L  + TD    R  +GK  V  R++A+A +GLGLLA    + +L Q +A  L+D L S    R D+ VAA+ ALGLTP+   P         A   RKH      +SR  QL +L      P +E  +   R     +H   A+ RL   +    R K    L+E+     D ++ +   A + LG++ +      D       + L + + EG P  RRFA ISL Q S   P +G + L G   AR+ L  +L+   T  +PW  +ALG+    L
Sbjct:   55 AETAAVALGILANDKSFEILFQLATDDPAARRFIGKTEVPVRSRAYACYGLGLLAYRTSNNELRQDIAETLVDLLASPHFSRRDIKVAAMTALGLTPLESNPDAALEGEEEAGSNRKH-----VLSRERQLDFLLD-YYNPANERANGTTRHWFVRSHAPNAMVRLLPGAAPEYREKVASLLIESVGRHSDENREIVMSATLALGQIGTAEDDGRDGLNNRIREELIRILKEGDPQSRRFAMISLGQ-SGGTPGEGENALAGGEVARKELLRQLSKGKTMLKPWAGLALGVMGRQL 343          
BLAST of mRNA_P-canaliculata_contig99527.24062.1 vs. uniprot
Match: A0A800KKL5_9BACT (HEAT repeat domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800KKL5_9BACT)

HSP 1 Score: 97.8 bits (242), Expect = 1.160e-18
Identity = 95/330 (28.79%), Postives = 151/330 (45.76%), Query Frame = 1
Query:    1 SESAVLSLGVVGHGSTAPPLLAILTDSKEGRDLMGKERVSTRAQAFAAFGLGLLANNVDSPDLHQRVALGLMDALDSK-VMREDVHVAALIALGLTPVPMTPHVPAP-DLRKHRNIESAVSRSGQLAWLARRLTGPQSESLSSAAR-----THGLVALGRLARDSWSGSRAKAMETLLEAATSRDAD-KHVRAGAWIGLGRVASGSSQPGDVAALKALAKGML-----EGQPVERRFAAISLAQASSRLPADGSPLLGYAT-ARRALQLRLASAPTQDEPWIAMALGIQAHALHHAGVAGTSATAGALLDRLRSERGTSQIGAFAVAVAL 948
            +E+A ++LG++ +  +   L  + TD    R  +GK  V  R +A+A +GLGLL     + +L Q +A  L+D L S    R D+ VAA+ ALGLTP+          D   + N +  +SR  QL +L      P +E  +   R      H   A+ RL   +  G +AK    L+ +      + + +   A + LG++ +      D   L    +G L     EG P  RRFA ISL Q S   P +G   L  AT AR+ L  +L+   T  +PW  +ALG+    L       + + + AL       +  ++IGA+ + + +
Sbjct:  210 AETAAVALGILANDISFEILFQLATDDPAARRFIGKTEVPIRTRAYACYGLGLLGYRTSNNELRQDIAETLVDLLTSPHFSRRDIKVAAMTALGLTPLESNVDAALEGDEEDNSNRKWVLSRERQLDFLLD-YYDPANERANGTTRHWYVRAHAPTAMARLLPGAAPGYKAKVAGLLIGSVDRYSKENREILMSATLALGQIGTAEDDGRD--GLNTQIRGELIRILKEGDPQSRRFAMISLGQ-SGGTPGEGENALAGATVARKELLRQLSKGKTMLKPWAGLALGVMGRQLLDHNETMSESASNALRAAAADCKRPAEIGAYLIGIGI 535          
BLAST of mRNA_P-canaliculata_contig99527.24062.1 vs. uniprot
Match: A0A2D6QEW2_9ARCH (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A2D6QEW2_9ARCH)

HSP 1 Score: 97.4 bits (241), Expect = 1.490e-18
Identity = 86/321 (26.79%), Postives = 143/321 (44.55%), Query Frame = 1
Query:    7 SAVLSLGVVGHGSTAPPLLAILTDSKEGRDLMGKERVSTRAQAFAAFGLGLLANNVDSPDLHQRVALGLMDALDSKVM-REDVHVAALIALGLTPVPMTPHVPAPDLRKHRNIESAVSRSGQLAWLARRLTGPQSESLSSAARTHGLVALGRLARDSWSGSRAKAMETLLEAAT------SRDADKHVRAGAWIGLGRVASGSSQPGDVAALKALAKGMLEGQPVERRFAAISLAQASSRLPADGSPLLGYATARRALQLRLASAPTQDEPWIAMALGIQAHALHHAGVAGTSATAGALLDRLRSERGTSQIGAFAVAVAL 948
            +A ++LG++ +  +   L  +  D + GR + G+ +V+   +AFA +GLGL+  +    ++ +R+   L+  L+ +     D+ VAA+ A+GL P+ +            +  +   S   Q+ +L R  T        +  R H    LGRL      G  A+  E + +         +R  D  VR  A + LG +        DV    AL + +  G P+E+RFA ISLA++ +R      P  G A+ R+ L   L+    +  PW A+A GI  + L   G         AL   L   +   ++GA A+AV L
Sbjct:  168 TAPVALGILANKDSYEALAGLARDDEMGRKIYGR-KVNDPMRAFATYGLGLIGTHTTDTNMRRRIVRDLIACLEDEGSDNSDLKVAAMTAMGLVPLEVVEDDMVCFCGTCKVADPDTSLGSQVTYLLRYFTSDGE--YDATVRAHTATTLGRLIEAQPEGMSARLKEVVTQFLVDSLGKYARQPDD-VRRSAVLALGLIGDADRDKADVWIRNALTRSVRRGDPIEKRFALISLARSGARKGTGEDPFSGTASTRKELLAALSKGKKEIRPWAALATGILGYHLRDEGGQLDPGVDNALRIALGRTKKPDEVGALALAVGL 484          
BLAST of mRNA_P-canaliculata_contig99527.24062.1 vs. uniprot
Match: A0A2D5AWB0_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AWB0_9BACT)

HSP 1 Score: 93.6 bits (231), Expect = 2.970e-17
Identity = 104/354 (29.38%), Postives = 152/354 (42.94%), Query Frame = 1
Query:    1 SESAVLSLGVVGHGSTAPPLLAILTDSKEGRDLMGKERVSTRAQAFAAFGLGLLANNVDSPDLHQRVALGLMDALDSKVMR---EDVHVAALIALGLTPVPMTPHVPAPDLRKHRNIESAVSRSGQLAWLARRLTGPQSESLSSAARTHGLVALGRL---ARDSWSGSRAKAMETLLEAATSRDADKHVRAGAWIGLGRVASGSSQPGDVAALKALAKGMLEGQPVE-RRFAAISLAQASSRLPADGSPLLGYATARRALQLRLASAPTQDEPWIAMALGIQAHALHHAGVAGTSATAGALLDRLRSERGTSQIGAFAVAVALSHVGVETSPADAAKALLMEKFERTKDPAARG 1041
            +E+A +SLG++    +   L  +L D    R L+GK  V  R +AFAAFGLGL+ N V+   L   +   L DAL S ++     DV VA L ALGL  VP++  V A  +       +A  R  Q+ WL   L   +   L    R H   A  RL   A  SW   R      + + + +    + V+  + + LGRV   + +P + A   AL +   E + VE RRF  +++AQ  SR   +       +  R  L  RL         W A+ALG+   +   +       T   L+  L   R    +GA A+A  +           AA   L++K     D  ARG
Sbjct:  193 AETAAISLGILADRGSVEMLTNLLLDRPAARKLLGKSEVPWRTRAFAAFGLGLIGNQVEEEALRVAIVNTLCDALSSGLLELAIPDVAVACLSALGL--VPLSTAVTASGV-------AACGRVRQIDWL---LAFGRRTDLDDHVRAHLPTAAARLLIGAPASWGLKRRLGESWIEDLSGAPKVSRAVKQSSVLALGRVGFPNDEPFECAIRAALLRASRESRNVEVRRFVFVAMAQIGSRAADNDVEQKIASEIRDHLTDRLQRGVGDVRSWAALALGVLGRSPSESASQVELRTDRLLVAALGEARAPRDVGACAIACGMRQQ-------KAAGLALLKKLAEVSDDEARG 527          
BLAST of mRNA_P-canaliculata_contig99527.24062.1 vs. uniprot
Match: A0A518BKP9_9BACT (PBS lyase HEAT-like repeat protein n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BKP9_9BACT)

HSP 1 Score: 91.3 bits (225), Expect = 1.790e-16
Identity = 103/355 (29.01%), Postives = 162/355 (45.63%), Query Frame = 1
Query:    1 SESAVLSLGVVGHGSTAPPLLAILTDSKEGRDLMGKERVSTRAQAFAAFGLGLLANNVDSPDLHQRVALGLMDALDSK--VMREDVHVAALIALGLTPVPMTPHVPAPDLRKHRNIESAVSRSGQLAWLARRLTGPQSESLSSAARTHGLVALGRLARD-SWSGSRAKAMETLLEAATSRDADK---HVRAGAWIGLGRVASGSSQPGDVAALKALAKGMLEGQPVERRFAAISLAQASSRLPADGSPLLGYATARRALQL--RLASAPTQDEPWIAMALGIQAHALHHAGVAGTSATAGALLDRLRSERGTSQIGAFAVAVALSHVGVETSPADAAKALLMEKFERTKDPAARG 1041
            SE+A LSLG++   ++   L A+  DSK G+D +G   V  R+QAFAA+GLGLL N    P +  RV   L D L     + R+D+ VA +I+LGLTP+   P   A D     + +   S   Q+ +L   L     E+ +   R H   A+ RL    +    R + ++ +L    +R   K    VR    + LG +        DV     L K +   Q   R+F  +S+A+ ++R P  G+  L         +L   L ++  +D+ W  MALG+  + L        ++ +  + D L   +    IGA +VA      G+   P   A+  L++    T+DP A+G
Sbjct:  208 SETAALSLGILASDNSIDLLEALARDSKLGQDAVGSTEVDPRSQAFAAYGLGLLGNRTGDPAVRSRVVAILTDLLPKAETMSRQDLAVACVISLGLTPLDPAPA--ATDADAEVSKDPTASLQAQIDFL---LEFMLDENKNYMPRAHVPTAVARLMTGLNDEVYRQRIVDAILLPVDARKGKKFVQEVRQSCALALGLIGDADDDAIDVEIRNVLLKDVQGYQSQTRKFGLMSMAKVAAR-PGSGAKDLDKNRRELTDELVKNLRNSGGEDQ-WAIMALGVYGYTLGKNEEVPPASLSLQIRDSLGKAKSPDDIGAASVAA-----GLFGDPE--AQETLLKLLGSTRDPVAQG 548          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99527.24062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A518EKI0_9BACT1.400e-6039.95Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A518F0D5_9BACT2.850e-4635.01Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A523PGH1_9BACT5.740e-3030.97HEAT repeat domain-containing protein n=1 Tax=Plan... [more]
A0A2E5X2T0_9BACT9.280e-2329.33Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2E5X634_9BACT5.860e-2229.01Uncharacterized protein n=2 Tax=Planctomycetes bac... [more]
A0A2E6D9Z7_9BACT2.780e-1931.08Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A800KKL5_9BACT1.160e-1828.79HEAT repeat domain-containing protein n=1 Tax=Plan... [more]
A0A2D6QEW2_9ARCH1.490e-1826.79Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A2D5AWB0_9BACT2.970e-1729.38Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A518BKP9_9BACT1.790e-1629.01PBS lyase HEAT-like repeat protein n=1 Tax=Plancto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig99527contigP-canaliculata_contig99527:2..1042 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons1
Model size1041
Cds size1041
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817354.5483217-CDS-P-canaliculata_contig99527:1..10421622817354.5483217-CDS-P-canaliculata_contig99527:1..1042Pelvetia canaliculata dioeciousCDSP-canaliculata_contig99527 2..1042 +
1693495242.898445-CDS-P-canaliculata_contig99527:1..10421693495242.898445-CDS-P-canaliculata_contig99527:1..1042Pelvetia canaliculata dioeciousCDSP-canaliculata_contig99527 2..1042 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig99527.24062.1prot_P-canaliculata_contig99527.24062.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig99527 2..1042 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig99527.24062.1

>prot_P-canaliculata_contig99527.24062.1 ID=prot_P-canaliculata_contig99527.24062.1|Name=mRNA_P-canaliculata_contig99527.24062.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=347bp
SESAVLSLGVVGHGSTAPPLLAILTDSKEGRDLMGKERVSTRAQAFAAFG
LGLLANNVDSPDLHQRVALGLMDALDSKVMREDVHVAALIALGLTPVPMT
PHVPAPDLRKHRNIESAVSRSGQLAWLARRLTGPQSESLSSAARTHGLVA
LGRLARDSWSGSRAKAMETLLEAATSRDADKHVRAGAWIGLGRVASGSSQ
PGDVAALKALAKGMLEGQPVERRFAAISLAQASSRLPADGSPLLGYATAR
RALQLRLASAPTQDEPWIAMALGIQAHALHHAGVAGTSATAGALLDRLRS
ERGTSQIGAFAVAVALSHVGVETSPADAAKALLMEKFERTKDPAARG
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mRNA from alignment at P-canaliculata_contig99527:2..1042+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig99527.24062.1 ID=mRNA_P-canaliculata_contig99527.24062.1|Name=mRNA_P-canaliculata_contig99527.24062.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=1041bp|location=Sequence derived from alignment at P-canaliculata_contig99527:2..1042+ (Pelvetia canaliculata dioecious)
TCGGAATCGGCGGTCCTGTCCCTTGGCGTCGTCGGCCACGGGAGCACGGC ACCGCCGCTGCTGGCGATCCTCACGGACAGCAAGGAGGGTCGCGATCTCA TGGGCAAAGAGCGGGTCAGTACCCGCGCCCAAGCCTTCGCGGCGTTTGGA CTCGGGCTCCTCGCGAACAACGTCGATTCCCCCGACCTACACCAGCGCGT CGCCTTAGGACTCATGGACGCCCTCGACTCTAAGGTGATGCGCGAAGACG TCCACGTGGCCGCGCTGATCGCCCTCGGGCTGACGCCGGTGCCGATGACG CCCCACGTTCCGGCCCCGGATCTGCGCAAGCACAGGAACATCGAGAGCGC CGTGTCCCGCTCTGGCCAGCTCGCGTGGCTAGCGCGGCGACTGACGGGCC CCCAGTCGGAGTCACTATCCTCCGCGGCCCGGACCCACGGGCTCGTAGCC CTCGGGCGGCTGGCCCGCGACTCATGGAGCGGATCTCGCGCCAAGGCGAT GGAGACCCTCCTCGAAGCCGCGACCTCGCGCGATGCGGATAAGCATGTCC GCGCCGGCGCTTGGATTGGGCTGGGCCGCGTGGCGTCCGGGTCCAGCCAA CCAGGCGACGTCGCAGCTCTCAAAGCCCTGGCTAAGGGCATGCTCGAAGG CCAGCCCGTGGAGCGCCGCTTCGCAGCGATCTCCCTCGCACAAGCCTCGT CCCGCCTTCCCGCGGACGGGAGCCCCCTCTTGGGCTACGCGACGGCCCGC CGGGCCCTGCAGCTGCGCCTCGCCTCCGCCCCAACCCAGGACGAGCCGTG GATCGCCATGGCCCTTGGCATCCAAGCCCACGCCCTGCACCACGCGGGGG TAGCCGGCACTAGCGCCACGGCCGGCGCCCTGCTGGACCGCTTACGCAGC GAACGGGGCACCTCGCAGATCGGCGCCTTTGCCGTCGCGGTGGCCCTCTC CCACGTTGGGGTGGAGACGTCCCCAGCCGACGCTGCCAAGGCGCTACTCA TGGAGAAGTTCGAGCGCACCAAGGACCCCGCCGCGCGCGGC
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Coding sequence (CDS) from alignment at P-canaliculata_contig99527:2..1042+

>mRNA_P-canaliculata_contig99527.24062.1 ID=mRNA_P-canaliculata_contig99527.24062.1|Name=mRNA_P-canaliculata_contig99527.24062.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=2082bp|location=Sequence derived from alignment at P-canaliculata_contig99527:2..1042+ (Pelvetia canaliculata dioecious)
TCGGAATCGGCGGTCCTGTCCCTTGGCGTCGTCGGCCACGGGAGCACGGC
ACCGCCGCTGCTGGCGATCCTCACGGACAGCAAGGAGGGTCGCGATCTCA
TGGGCAAAGAGCGGGTCAGTACCCGCGCCCAAGCCTTCGCGGCGTTTGGA
CTCGGGCTCCTCGCGAACAACGTCGATTCCCCCGACCTACACCAGCGCGT
CGCCTTAGGACTCATGGACGCCCTCGACTCTAAGGTGATGCGCGAAGACG
TCCACGTGGCCGCGCTGATCGCCCTCGGGCTGACGCCGGTGCCGATGACG
CCCCACGTTCCGGCCCCGGATCTGCGCAAGCACAGGAACATCGAGAGCGC
CGTGTCCCGCTCTGGCCAGCTCGCGTGGCTAGCGCGGCGACTGACGGGCC
CCCAGTCGGAGTCACTATCCTCCGCGGCCCGGACCCACGGGCTCGTAGCC
CTCGGGCGGCTGGCCCGCGACTCATGGAGCGGATCTCGCGCCAAGGCGAT
GGAGACCCTCCTCGAAGCCGCGACCTCGCGCGATGCGGATAAGCATGTCC
GCGCCGGCGCTTGGATTGGGCTGGGCCGCGTGGCGTCCGGGTCCAGCCAA
CCAGGCGACGTCGCAGCTCTCAAAGCCCTGGCTAAGGGCATGCTCGAAGG
CCAGCCCGTGGAGCGCCGCTTCGCAGCGATCTCCCTCGCACAAGCCTCGT
CCCGCCTTCCCGCGGACGGGAGCCCCCTCTTGGGCTACGCGACGGCCCGC
CGGGCCCTGCAGCTGCGCCTCGCCTCCGCCCCAACCCAGGACGAGCCGTG
GATCGCCATGGCCCTTGGCATCCAAGCCCACGCCCTGCACCACGCGGGGG
TAGCCGGCACTAGCGCCACGGCCGGCGCCCTGCTGGACCGCTTACGCAGC
GAACGGGGCACCTCGCAGATCGGCGCCTTTGCCGTCGCGGTGGCCCTCTC
CCACGTTGGGGTGGAGACGTCCCCAGCCGACGCTGCCAAGGCGCTACTCA
TGGAGAAGTTCGAGCGCACCAAGGACCCCGCCGCGCGCGGCTCGGAATCG
GCGGTCCTGTCCCTTGGCGTCGTCGGCCACGGGAGCACGGCACCGCCGCT
GCTGGCGATCCTCACGGACAGCAAGGAGGGTCGCGATCTCATGGGCAAAG
AGCGGGTCAGTACCCGCGCCCAAGCCTTCGCGGCGTTTGGACTCGGGCTC
CTCGCGAACAACGTCGATTCCCCCGACCTACACCAGCGCGTCGCCTTAGG
ACTCATGGACGCCCTCGACTCTAAGGTGATGCGCGAAGACGTCCACGTGG
CCGCGCTGATCGCCCTCGGGCTGACGCCGGTGCCGATGACGCCCCACGTT
CCGGCCCCGGATCTGCGCAAGCACAGGAACATCGAGAGCGCCGTGTCCCG
CTCTGGCCAGCTCGCGTGGCTAGCGCGGCGACTGACGGGCCCCCAGTCGG
AGTCACTATCCTCCGCGGCCCGGACCCACGGGCTCGTAGCCCTCGGGCGG
CTGGCCCGCGACTCATGGAGCGGATCTCGCGCCAAGGCGATGGAGACCCT
CCTCGAAGCCGCGACCTCGCGCGATGCGGATAAGCATGTCCGCGCCGGCG
CTTGGATTGGGCTGGGCCGCGTGGCGTCCGGGTCCAGCCAACCAGGCGAC
GTCGCAGCTCTCAAAGCCCTGGCTAAGGGCATGCTCGAAGGCCAGCCCGT
GGAGCGCCGCTTCGCAGCGATCTCCCTCGCACAAGCCTCGTCCCGCCTTC
CCGCGGACGGGAGCCCCCTCTTGGGCTACGCGACGGCCCGCCGGGCCCTG
CAGCTGCGCCTCGCCTCCGCCCCAACCCAGGACGAGCCGTGGATCGCCAT
GGCCCTTGGCATCCAAGCCCACGCCCTGCACCACGCGGGGGTAGCCGGCA
CTAGCGCCACGGCCGGCGCCCTGCTGGACCGCTTACGCAGCGAACGGGGC
ACCTCGCAGATCGGCGCCTTTGCCGTCGCGGTGGCCCTCTCCCACGTTGG
GGTGGAGACGTCCCCAGCCGACGCTGCCAAGGCGCTACTCATGGAGAAGT
TCGAGCGCACCAAGGACCCCGCCGCGCGCGGC
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