prot_P-canaliculata_contig9937.24049.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9937.24049.1
Unique Nameprot_P-canaliculata_contig9937.24049.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length355
Homology
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BLAST of mRNA_P-canaliculata_contig9937.24049.1 vs. uniprot
Match: D7G3K8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3K8_ECTSI)

HSP 1 Score: 256 bits (653), Expect = 7.510e-75
Identity = 165/287 (57.49%), Postives = 196/287 (68.29%), Query Frame = 0 
Query:   61 GAGEMTVAAVRASLLRNRADE---GPKPQGEEWEDTVKRFIKHVESLPAGTTQEELSLIFAAALDPTLVRMRAANASLIGLAD--VSASRELSIHDDDXXXXXXXXXXXXGYGGAWSATRGSRGRGRFKVRLELDATDGDEQPPEGIAGLLRAVAEARAAVEATARAEACVAAAGDTLGGLQELKSDYKRSLPTGPREPIQLIIAEEQERVLGYKSAHEIIVRQRIEELCDAGSRVGEAYRTGEAESGWSSVKSQVDKFLRKFTKYSVSRLPS-LGSIPDLLGLGVA 341
            GAGEMTVAAVR SLL N ++E   GP PQ  EWE  VK+FI HVESLP GT QEELSL+FAAALDPTLVR+R AN  L+GLA+  +      +  DDD  XXXXXXXXXX   GA  +         FKVRLEL+A +    PP+GIAG+LRAVA A AAVEA AR EACV   GDTLGGL E+K DYKR LP GPREP+Q IIAEE+ RV GY  AHE ++R+  E + + G  VG AYR  E E+GWS V+ QVD FL +F  Y  S +P+ L +   +LG+ +A
Sbjct:  497 GAGEMTVAAVRESLLSNPSEERKPGPSPQ--EWEVAVKKFISHVESLPPGTEQEELSLMFAAALDPTLVRLRMANTKLVGLAEACLPQGEGEAPGDDDGEXXXXXXXXXXXXXGAKKSG--------FKVRLELEAPEEGAPPPDGIAGVLRAVAGAAAAVEAAARVEACVICGGDTLGGLGEIKRDYKRCLPPGPREPLQFIIAEEEARVQGYVGAHEQVLREAGETVHEVGPEVGRAYRAVEREAGWSGVRDQVDAFLIEFEDYCASLMPAPLSTSRSILGVDLA 773
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9937.24049.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3K8_ECTSI7.510e-7557.49Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9937contigP-canaliculata_contig9937:2241..3305 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9937.24049.1mRNA_P-canaliculata_contig9937.24049.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9937 1047..4116 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9937.24049.1 ID=prot_P-canaliculata_contig9937.24049.1|Name=mRNA_P-canaliculata_contig9937.24049.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=355bp
MSSYKRRSLRDDGGLEAEEEEGDEEGSRAGKKRGKRGVVPEAEDEADEDP
EGARRGAVGVGAGEMTVAAVRASLLRNRADEGPKPQGEEWEDTVKRFIKH
VESLPAGTTQEELSLIFAAALDPTLVRMRAANASLIGLADVSASRELSIH
DDDDDDDEDDEGGHDGYGGAWSATRGSRGRGRFKVRLELDATDGDEQPPE
GIAGLLRAVAEARAAVEATARAEACVAAAGDTLGGLQELKSDYKRSLPTG
PREPIQLIIAEEQERVLGYKSAHEIIVRQRIEELCDAGSRVGEAYRTGEA
ESGWSSVKSQVDKFLRKFTKYSVSRLPSLGSIPDLLGLGVASGDARGSAA
ASRV*
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