prot_P-canaliculata_contig9937.24050.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9937.24050.1
Unique Nameprot_P-canaliculata_contig9937.24050.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length449
Homology
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BLAST of mRNA_P-canaliculata_contig9937.24050.1 vs. uniprot
Match: D7G3K7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3K7_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 1.030e-20
Identity = 59/112 (52.68%), Postives = 78/112 (69.64%), Query Frame = 0 
Query:    1 MGLSLRDEASLFQLECDRSRARFGVILMSFRFDPPVAADVVEDLDVSPCTGTSAVPKSVAPLSAGSGGRDPEEQEAVALACGREQSRPGPEVEDPVYMNVAGNFACLLLDDD 112
            +GLSLR+ AS+FQLECDRSRAR+G+IL++FRFDPPVAADV+  LD     G +++P+ V    A  G  + E+  A       +Q+    EV +PVY+NV G+FACLLLDDD
Sbjct:  131 IGLSLREGASVFQLECDRSRARYGIILLAFRFDPPVAADVLGALDG---VGLASLPRGVT-TPADQGHDEGEKAPAWGAPEAGQQAEREVEVAEPVYINVEGHFACLLLDDD 238
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9937.24050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3K7_ECTSI1.030e-2052.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9937contigP-canaliculata_contig9937:6927..9518 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9937.24050.1mRNA_P-canaliculata_contig9937.24050.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9937 5965..9986 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9937.24050.1 ID=prot_P-canaliculata_contig9937.24050.1|Name=mRNA_P-canaliculata_contig9937.24050.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=449bp
MGLSLRDEASLFQLECDRSRARFGVILMSFRFDPPVAADVVEDLDVSPCT
GTSAVPKSVAPLSAGSGGRDPEEQEAVALACGREQSRPGPEVEDPVYMNV
AGNFACLLLDDDVLQPADFAKVEPREPSKPFVVAPSRRGPNDPADTEGLR
SAHRDPEYSRRSPKARDRGTREAHTNGSEPSPSNPSDSAHERVVAAQNAG
GASTSGSGSSNSSRSNNRSNNSSSNSSSGNGAPSKELRRHAGSFGGLAQQ
ITTLGRGGGGGFGKGTPPLGKRPRPPSTAASVERTPPADPSKQLEEMPQQ
RWMMGRLRQKQELRGAGGSVAGGSGSRDGSKSKRETSVTRPGGWKDGFRR
SSGLSGPRPRPFTIPVSSGRSWGRSSVLLGCETGGDGAVGAANDADGAEA
TFFVSRGNLRPALASDEEGDGAFMKIDSRYNVAIYGKGSGEGTSFWQP*
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