prot_P-canaliculata_contig99010.24019.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig99010.24019.1
Unique Nameprot_P-canaliculata_contig99010.24019.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length174
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig99010.24019.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 154..173
NoneNo IPR availablePFAMPF13646HEAT_2coord: 18..95
e-value: 2.1E-9
score: 37.7
coord: 101..147
e-value: 1.8E-6
score: 28.3
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 10..171
e-value: 4.8E-16
score: 60.7
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 16..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig99010contigP-canaliculata_contig99010:297..818 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig99010.24019.1mRNA_P-canaliculata_contig99010.24019.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig99010 297..818 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig99010.24019.1 ID=prot_P-canaliculata_contig99010.24019.1|Name=mRNA_P-canaliculata_contig99010.24019.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=174bp
ALEFLKVRWPRDRHPTLIKLVINCVSSDQKFNREAALKILADRDPDQSFP
YIFARVDDTSFTIRSLAYQMLRKVGDRRAIKPLAKRFASDDVDRISSLLR
SFGSDSEDAVAKYLSDEDPDIRLKACNLIGKIGTVKSLPALEAMQRRETT
MMLLAQTRSSINKIERRNQSQSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold