mRNA_P-canaliculata_contig9894.24008.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig9894.24008.1
Unique NamemRNA_P-canaliculata_contig9894.24008.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig9894.24008.1 vs. uniprot
Match: D7FM29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM29_ECTSI)

HSP 1 Score: 425 bits (1092), Expect = 3.300e-137
Identity = 208/279 (74.55%), Postives = 240/279 (86.02%), Query Frame = 3
Query:    3 MDASEVRIDDKSHRKRIIFMRHAESEWNEVFNRGYGPWFVVRLVHSLVREAMMLTTRDSVFFDSPLSNRGIEQTQELLRFLQKPSDNFSSPKVSEAVAVMRGGFTKSS---VLVTSNLRRAIATGLITLWDRLRKGEERYLVHSALQEMTFNVDGISMLDKGETPDEGLAKELGGQVTFDAEFNTGTKALGHTGMKRMKAFSEWASQRPEDVVVAIGHSLYIRSFFRNFLPEEVEHFAKEKKIVNCGVVSFTIVRGDYNGRAAYRIDPDSIVSVYGGFK 830
            +D+ +VR+D  S RKRIIF+RH ESEWNEVFNRG+GP F+VRLV + VRE MML+TRDSVFFDSPLSN GI+QTQEL+RFLQK  D+FS   V++AVA +RGG T+SS   V+VTSNLRRAIATGLITLW+RLR GEERYLVHSALQEMTFN+DGIS+L++GE PDEGLAKELGG V FDAEFN GTKALG+TGMKRMKA +EWASQRPED VV +GHSLY RSFFR FLP+   H AK+KK+VNCGVV+FT+  G Y GR AY+I+PDSIVSVYGGFK
Sbjct:  217 VDSGKVRVDSTSRRKRIIFIRHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLSTRDSVFFDSPLSNTGIQQTQELIRFLQKTPDSFSGSGVADAVATLRGGSTQSSQSSVVVTSNLRRAIATGLITLWERLRGGEERYLVHSALQEMTFNIDGISLLERGEKPDEGLAKELGGNVVFDAEFNVGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKMVNCGVVAFTLESGVYEGRQAYKIEPDSIVSVYGGFK 495          
BLAST of mRNA_P-canaliculata_contig9894.24008.1 vs. uniprot
Match: A0A835ZDW6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW6_9STRA)

HSP 1 Score: 357 bits (917), Expect = 1.680e-113
Identity = 171/275 (62.18%), Postives = 208/275 (75.64%), Query Frame = 3
Query:    6 DASEVRIDDKSHRKRIIFMRHAESEWNEVFNRGYGPWFVVRLVHSLVREAMMLTTRDSVFFDSPLSNRGIEQTQELLRFLQKPSDNFSSPKVSEAVAVMRGGFTKSSVLVTSNLRRAIATGLITLWDRLRKGEERYLVHSALQEMTFNVDGISMLDKGETPDEGLAKELGGQVTFDAEFNTGTKALGHTGMKRMKAFSEWASQRPEDVVVAIGHSLYIRSFFRNFLPEEVEHFAKEKKIVNCGVVSFTIVRGDYNGRAAYRIDPDSIVSVYGGFK 830
            D   V +D  +  KRI+F+RH ESEWNEVFNRG+GP F+VRLV +L+REA++LTTRDSVFFDSPLS+ GI+QTQEL+RFLQ+P  + + PKV E VA++ G   K SVL TSNLRRAIATGLI  WDRLR+  E +LV S LQE+TFNVDGIS+L+ GE PD  + + LG ++ FDAEFN GTK L   G  RM  F +WAS RPED VV  GHSL+ R FFRNFLP    H +K+KKIVNCGV++FT+ +G  NGR AY++DP SI  VYGGFK
Sbjct:   58 DPDAVVVDPNAPTKRIVFLRHGESEWNEVFNRGFGPSFLVRLVSALIREALLLTTRDSVFFDSPLSDTGIKQTQELVRFLQRPQGSVADPKVDEIVAILNGEAAKGSVLTTSNLRRAIATGLIVFWDRLRQTRENFLVLSCLQEVTFNVDGISLLENGEVPDGSVGRALGQEIAFDAEFNAGTKGLRSNGYARMGEFCKWASARPEDTVVCAGHSLWFRDFFRNFLPFAARHASKQKKIVNCGVIAFTLQQGTLNGRPAYKVDPASITVVYGGFK 332          
BLAST of mRNA_P-canaliculata_contig9894.24008.1 vs. uniprot
Match: A0A6H5KZS7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZS7_9PHAE)

HSP 1 Score: 336 bits (861), Expect = 8.130e-106
Identity = 177/295 (60.00%), Postives = 205/295 (69.49%), Query Frame = 3
Query:    3 MDASEVRIDDKSHRKRIIFMRHAESEWNEVFNRGYGPWFVVRLVHSLVREAMMLTTRDSVFFDSPLSNRGIEQTQELLRFLQKPSDNFSSPKVSEAVAVMRGGFTKSSVLVTSNLRRAIATGLITLWDRLRKGEERYLVHSALQ-------------------------------------------EMTFNVDGISMLDKGETPDEGLAKELGGQVTFDAEFNTGTKALGHTGMKRMKAFSEWASQRPEDVVVAIGHSLYIRSFFRNFLPEEVEHFAKEKKIVNCGVVSFTIVR 758
            +D+ +VR+D  S RKRIIF+RH ESEWNEVFNRG+GP F+VRLV + VRE MML+TRDSVFFDSPLSN GI+Q                   V++AVA +RGG T+SSV+VTSNLRRAIATGLITLW+RLR GEERY VHSALQ                                           EMTFN+DGIS+L++GE PDEGLAKELGG V FDAEFN GTKALG+TGMKRMKA +EWASQRPED VV +GHSLY RSFFR FLP+   H AK+KK+VNCGVV+FT+ R
Sbjct:   13 VDSGKVRVDSTSRRKRIIFIRHGESEWNEVFNRGFGPSFLVRLVSAFVREVMMLSTRDSVFFDSPLSNTGIQQ-------------------VADAVATLRGGSTQSSVVVTSNLRRAIATGLITLWERLRGGEERYFVHSALQARRHRRGSSVXXXXXXXMPPLPILSAGYVLCRHDAIYVRAVFQEMTFNIDGISLLERGEKPDEGLAKELGGNVVFDAEFNVGTKALGNTGMKRMKALAEWASQRPEDTVVCVGHSLYFRSFFRCFLPQSAVHDAKKKKMVNCGVVAFTLER 288          
BLAST of mRNA_P-canaliculata_contig9894.24008.1 vs. uniprot
Match: A0A7S1J5Y9_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J5Y9_9EUGL)

HSP 1 Score: 229 bits (583), Expect = 1.490e-64
Identity = 125/282 (44.33%), Postives = 175/282 (62.06%), Query Frame = 3
Query:    6 DASEVRIDDKSHRKRIIFMRHAESEWNEVFNRGYGPWFVVRLVHSLVREAMML-TTRDSVFFDSPLSNRGIEQTQELLRFLQKPSDNFSSPKVSEAVAVMRGGFTKSSVLVTSNLRRAIATGLITLWDRLRKGEERYLVHSALQEMTFNVDGISMLDKGETPDEGLAKELGGQVT------FDAEFNTGTKALGHTGMKRMKAFSEWASQRPEDVVVAIGHSLYIRSFFRNFLPEEVEHFAKEKKIVNCGVVSFTIVRGDYNGRAAYRIDPDSIVSVYGGFK 830
            D+  VR  +    +RIIF+RH ES+WN+VFNRG+GP F VRL  ++  E +++    DS+FFDSPLS  G  Q   L  FL+KP DN   P  +E    +  G T SSVLV+SNLRRA+ATG I  W R+R+ +E+  + S LQE++ NVD +++   G  P   + +EL G+         +  +N G KAL   G KRM AF+EW  +R E  V+A GHSL+ + FF  +LP   +H A++ K+VN GVV+FT+ +  ++GR  Y I P+SI  VYGGF+
Sbjct:   57 DSDVVRNMEPQASRRIIFVRHGESKWNDVFNRGFGPSFPVRLFRAIFEELLIIFQADDSIFFDSPLSPLGDSQVLRLYNFLEKP-DNL--PAGAEKDYKVLRGDTGSSVLVSSNLRRAVATGAIGFWGRIRRTKEKIYILSCLQEISRNVDALALAPTGAVPRIDMPRELDGKAGVLDRQYMEGTWNYGNKALSSNGGKRMNAFAEWVFKRDEGTVIAAGHSLWFKHFFNTYLPRSCDHPARKLKMVNSGVVAFTLNQVKFSGRMVYYIVPESIQVVYGGFE 335          
BLAST of mRNA_P-canaliculata_contig9894.24008.1 vs. uniprot
Match: A0A7S1X7Z0_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1X7Z0_9CHLO)

HSP 1 Score: 226 bits (575), Expect = 1.780e-63
Identity = 126/268 (47.01%), Postives = 170/268 (63.43%), Query Frame = 3
Query:   45 KRIIFMRHAESEWNEVFNRGYGPWFVVRLVHSLVREAMMLT-TRDSVFFDSPLSNRGIEQTQELLRFLQKPSDNFSSPKVSEAVAVMRG-GFTKSSVLVTSNLRRAIATGLITLWDRLRKGEERYLVHSALQEMTFNVDGISMLDKGETPD-EGLAKELGG----QVTFDAEFNTGTKALGHTGMKRMKAFSEWASQRPEDVVVAIGHSLYIRSFFRNFLPEEVEHFAKEKKIVNCGVVSFTIVRGDYNGRAAYRIDPDSIVSVYGGF 827
            KR+IF+RH ES+WNEVFNRG+GP F VRL+ ++ RE   L+ T DSVF DS LS  G+ Q +EL++FL+K S     P +    A+++G   T  SV+ +SNLRRA+AT  I L  RL++  E+  + S LQE++FN+D  ++      PD   +A E+      Q  FD   NTG K +  TG++RM AF E    R E  ++A GHSLY RSFF+ FLP   EH AK+KK+VN G V+F I R  + G+  YRI+PDS+  VYGGF
Sbjct:   70 KRVIFIRHGESDWNEVFNRGFGPSFFVRLLKAVFREVGELSITPDSVFIDSALSPLGMFQARELVQFLEKDSSTTDHPDLH---ALLKGDSATADSVIFSSNLRRALATAAIGLQQRLQRTGEKCHIASCLQEISFNLDAGALAPALGIPDLHAIAPEMWSTYDPQELFDPSLNTGDKPIFGTGLQRMNAFCELVFGREESTIIATGHSLYFRSFFQTFLPRGAEHVAKKKKMVNSGTVAFNISRAVHAGKQVYRIEPDSVTVVYGGF 334          
BLAST of mRNA_P-canaliculata_contig9894.24008.1 vs. uniprot
Match: C1N5E2_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N5E2_MICPC)

HSP 1 Score: 225 bits (573), Expect = 8.860e-63
Identity = 122/271 (45.02%), Postives = 164/271 (60.52%), Query Frame = 3
Query:   45 KRIIFMRHAESEWNEVFNRGYGPWFVVRLVHSLVREAMMLTTRDSVFFDSPLSNRGIEQTQELLRFLQKPSDNFSSPKVSEAVAVMRGGFTKSSVLVTSNLRRAIATGLITLWDRLRKGEERYLVHSALQEMTFNVDGISMLDKGET-PDEGLAKELGGQVTFD------AEFNTGTKALGHTGMKRMKAFSEWASQRPEDV--VVAIGHSLYIRSFFRNFLPEEVEHFAKEKKIVNCGVVSFTIVRG-DYNGRAAYRIDPDSIVSVYGGF 827
            KR+IF+RH ES WNEVFNRG+GP F +RL   L+ EA ++ +R S F D+PLS+RG  Q +EL  FL+           +   A +RG     S+LV SNLRRA+AT  I  WDR+ +  E+ +VHSALQEM  NVD  ++  +GE  P +G+  ++GG  T D      A  N G K +   G   +  F+ W  +  +D   V+  GHSL+ + FF+ FLP   +H AK+KKIVNCG V FT+  G D +GR AYRIDP S+  +YGGF
Sbjct:   99 KRVIFVRHGESTWNEVFNRGFGPGFPLRLAWGLLHEAAVIFSRGSFFVDAPLSHRGYRQARELRAFLKTYEPTGDGTTTNPDAAALRGDV--RSILVGSNLRRAVATIAIGFWDRIARTREKIIVHSALQEMARNVDAYAIARRGEAVPLDGVEAKIGGGETMDQIPSCDARNNEGNKKVDRCGNDALLEFAAWVVENTKDADCVIVGGHSLWFKEFFKAFLPRRSDHVAKKKKIVNCGCVGFTLQAGRDDDGRVAYRIDPKSVDVIYGGF 367          
BLAST of mRNA_P-canaliculata_contig9894.24008.1 vs. uniprot
Match: A0A7S4C2E3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C2E3_CHRCT)

HSP 1 Score: 220 bits (560), Expect = 4.530e-61
Identity = 117/261 (44.83%), Postives = 163/261 (62.45%), Query Frame = 3
Query:   48 RIIFMRHAESEWNEVFNRGYGPWFVVRLVHSLVREAMMLTTRDSVFFDSPLSNRGIEQTQELLRFLQKPSDNFSSPKVSEAVAVMRGGFTKSSVLVTSNLRRAIATGLITLWDRLRKGEERYLVHSALQEMTFNVDGISMLDKGETPDEGLAKELGGQVTFDAEFNTGTKALGHTGMKRMKAFSEWASQRPEDVVVAIGHSLYIRSFFRNFLPEEVEHFAKEKKIVNCGVVSFTIVRG-DYNGRAAYRIDPDSIVSVYGGF 827
            R+IF+RH ES WN VFNRG+GP F+ RL+ +L+ E  +L   DS F DSPLS  G+EQ   L  FL+KP  +   P   E    +  G ++S +LV+S LRRA AT  I+L +R+ +  E  L+HS+ QE+T NVD  S+  +G  P      EL   +  D  FN G K+L  TG++R+  F+ WA+ RPE  ++  GHSL+ R+FF+ FLP++ EH +K+ KIVNCG V FT+  G    G   +RIDP+S+  +YGGF
Sbjct:   99 RVIFVRHGESVWNYVFNRGFGPSFIYRLISTLLYELYLLPLFDSAFLDSPLSQLGLEQCAGLQGFLRKPCID---PAAREDFENLVNGESRS-LLVSSQLRRACATLAISLDERISRSHEPILLHSSCQEITRNVDSQSIATRGGAPALYGCDELERPLRLDGTFNRGNKSLAFTGIRRLNDFARWAADRPEQCIIVAGHSLWFRTFFQLFLPKQFEHISKKSKIVNCGAVGFTLQTGLTPEGALRHRIDPESLRVIYGGF 355          
BLAST of mRNA_P-canaliculata_contig9894.24008.1 vs. uniprot
Match: A0A7S0X839_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0X839_9CHLO)

HSP 1 Score: 214 bits (546), Expect = 6.740e-59
Identity = 120/279 (43.01%), Postives = 163/279 (58.42%), Query Frame = 3
Query:   45 KRIIFMRHAESEWNEVFNRGYGPWFVVRLVHSLVREAMMLTTRDSVFFDSPLSNRGIEQTQELLRFLQKPSDNFSSP-KVSEAVAVMRGGFTKSSVLVTSNLRRAIATGLITLWDRLRKGEERYLVHSALQEMTFNVDGISMLDKGET-PDEGLAKELGGQ---------------VTFDAEFNTGTKALGHTGMKRMKAFSEWASQRPEDVVVAIGHSLYIRSFFRNFLPEEVEHFAKEKKIVNCGVVSFTIVRGDYNGRA-AYRIDPDSIVSVYGGF 827
            KR+IF+RH ES WN+VFNRG+GP F VRLVH LV+EA +L +R S F DSPLS  G +Q ++L  FL++ +   + P     A A    G T +S++V SNLRRA+AT  I  +DRL + +E+  V S LQEM  NVD  ++    E  P +G+ + + G                +  ++ FN G K +   GM  M  F+EWA  +  D ++A GHSL+ + FF+ FLP+   H  K+KKI NCGVV FTI    +      +RIDPDSI  VY GF
Sbjct:   94 KRVIFVRHGESTWNDVFNRGFGPMFPVRLVHGLVQEAGVLISRSSYFVDSPLSKLGYKQAKDLRVFLKEQAAASTHPGDAGAADAAALAGVTGTSIVVASNLRRAVATTAIGFYDRLARTQEKVYVLSCLQEMARNVDAYALAGAREAVPLDGIEEHIAGYGLEASGLRTGDSGSVIGLNSHFNAGNKPIKRNGMNSMTEFAEWAVAQDADTIIAGGHSLWFKEFFKAFLPKSSLHKCKKKKIANCGVVGFTIQHAKHPTHGDMFRIDPDSIDVVYLGF 372          
BLAST of mRNA_P-canaliculata_contig9894.24008.1 vs. uniprot
Match: A0A7S0T501_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T501_9RHOD)

HSP 1 Score: 210 bits (534), Expect = 2.160e-58
Identity = 125/272 (45.96%), Postives = 165/272 (60.66%), Query Frame = 3
Query:   45 KRIIFMRHAESEWNEVFNRGYGPW-FVVRLVHSLVREAMMLTTRDSVFFDSPLSNRGIEQTQELLRFLQKPSDNFSSPKVSEAVAVMRG---GFTK-SSVLVTSNLRRAIATGLITLWDRLRKGEERYLVHSALQEMTFNVDGISMLDKGE-TPDEG-LAKELGGQV---TFDAEFNTGTKALGHTGMKRMKAFSEWASQRPEDVVV-AIGHSLYIRSFFRNFLPEEVEHFAKEKKIVNCGVVSFTIVRGDYNGRAAYRIDPDSIVSVYGGF 827
            K  IF+RH ES+WNEVFNRG+ P  FV RL+ SL  E  M+ T DS+FFDS LS+ GI Q  E++ FL+  S        S+   V+RG   G ++ SSV+V SNLRR++ T L+TL  RL++  ER  + + LQE+TFNVDGI++    E TP  G +   L   V   + D   N GTK++   GM RM  F EWA  + E VVV A GHSLY+R   RNFLP + +H  K KK+ NCG + F++     +    YRIDP S+  +YGGF
Sbjct:   13 KTFIFIRHGESDWNEVFNRGFNPASFVPRLIRSLFHELSMIPTTDSLFFDSSLSSTGITQAMEMVAFLESDS--------SDRTRVLRGDTDGSSQLSSVIVCSNLRRSLQTALLTLQARLKRTGERVRMMTCLQEVTFNVDGIALSKSREITPSMGEVGVHLPSDVLERSVDPTLNHGTKSIQSNGMIRMLEFLEWAFAQDEPVVVIAGGHSLYLRYMLRNFLPADSDHIGKSKKLSNCGALQFSMTSAQLDAAPMYRIDPRSLQVLYGGF 276          
BLAST of mRNA_P-canaliculata_contig9894.24008.1 vs. uniprot
Match: A0A7S0HZQ7_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HZQ7_9EUKA)

HSP 1 Score: 211 bits (538), Expect = 5.500e-58
Identity = 118/269 (43.87%), Postives = 166/269 (61.71%), Query Frame = 3
Query:   48 RIIFMRHAESEWNEVFNRGYGPWFVVRLVHSLVREAMMLTTRDSVFFDSPLSNRGIEQTQELLRFLQKPSDNFSSPKVSEAVAVMRGGFTKSSVLVTSNLRRAIATGLITLWDRLRKGEERYLVHSALQEMTFNVDGISMLDKGETPDEGLAKELGGQVTFDAEFNTGTKALGHTGMKRMKAFSEWASQRPEDVVVAIGHSLYIRSFFRNFLPEEVEHFAKEKKIVNCGVVSFTIV----RGDYNGRAA-----YRIDPDSIVSVYGGF 827
            RIIF+RH ES WN VFNRG+GP F+VRLV +++ E  ++   DS F DSPLS+ G EQ   L  FL+ P      P       V+  G  +S V+V+S LRRA AT  I L DRL++  E  L+HS+ QE++ N D +S+ + G+ P    + EL  ++ +D   N G+K+LG  GM R++ F+ WA++R E  ++  GHSL+ + FF+ +LP+  +H  K+KKIVNCG V FT+     RG   GRA+     +RIDP SI  +YGGF
Sbjct:   89 RIIFIRHGESMWNLVFNRGFGPSFLVRLVKAVLYELYLIPFDDSCFLDSPLSDLGFEQCHSLQAFLRNPC---LDPAAQADFDVLTAGEGRS-VIVSSQLRRAAATAAIGLADRLKRTNEPILMHSSCQEISRNFDTLSITEAGKGPVLRGSVELERKLHYDGTANKGSKSLGFRGMHRIEDFAAWAAKRNESTIIVAGHSLWFKEFFKLYLPKAADHTCKKKKIVNCGAVGFTLQTASPRGVTLGRASDSSLRHRIDPTSISVIYGGF 353          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9894.24008.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM29_ECTSI3.300e-13774.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZDW6_9STRA1.680e-11362.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KZS7_9PHAE8.130e-10660.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S1J5Y9_9EUGL1.490e-6444.33Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S1X7Z0_9CHLO1.780e-6347.01Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
C1N5E2_MICPC8.860e-6345.02Predicted protein n=1 Tax=Micromonas pusilla (stra... [more]
A0A7S4C2E3_CHRCT4.530e-6144.83Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0X839_9CHLO6.740e-5943.01Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A7S0T501_9RHOD2.160e-5845.96Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A7S0HZQ7_9EUKA5.500e-5843.87Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9894contigP-canaliculata_contig9894:3195..8393 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score428.3
Seed ortholog evalue2.7e-117
Seed eggNOG ortholog2880.D7FM29
EggNOG OGs2ASAB@1,2RZPE@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHistidine phosphatase superfamily
Ec32 orthologEc-01_010450.1
Exons8
Model size2448
Cds size831
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9894.24008.1prot_P-canaliculata_contig9894.24008.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig9894 3197..6778 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817350.7598183-UTR-P-canaliculata_contig9894:3194..31961622817350.7598183-UTR-P-canaliculata_contig9894:3194..3196Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9894 3195..3196 +
1693495240.445109-UTR-P-canaliculata_contig9894:3194..31961693495240.445109-UTR-P-canaliculata_contig9894:3194..3196Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9894 3195..3196 +
1622817350.8659947-UTR-P-canaliculata_contig9894:6778..83931622817350.8659947-UTR-P-canaliculata_contig9894:6778..8393Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9894 6779..8393 +
1693495240.5548582-UTR-P-canaliculata_contig9894:6778..83931693495240.5548582-UTR-P-canaliculata_contig9894:6778..8393Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9894 6779..8393 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817350.771231-CDS-P-canaliculata_contig9894:3196..32831622817350.771231-CDS-P-canaliculata_contig9894:3196..3283Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 3197..3283 +
1693495240.4585078-CDS-P-canaliculata_contig9894:3196..32831693495240.4585078-CDS-P-canaliculata_contig9894:3196..3283Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 3197..3283 +
1622817350.7821274-CDS-P-canaliculata_contig9894:4048..41801622817350.7821274-CDS-P-canaliculata_contig9894:4048..4180Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 4049..4180 +
1693495240.4728525-CDS-P-canaliculata_contig9894:4048..41801693495240.4728525-CDS-P-canaliculata_contig9894:4048..4180Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 4049..4180 +
1622817350.7927694-CDS-P-canaliculata_contig9894:4395..44521622817350.7927694-CDS-P-canaliculata_contig9894:4395..4452Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 4396..4452 +
1693495240.4895608-CDS-P-canaliculata_contig9894:4395..44521693495240.4895608-CDS-P-canaliculata_contig9894:4395..4452Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 4396..4452 +
1622817350.8071053-CDS-P-canaliculata_contig9894:4718..48741622817350.8071053-CDS-P-canaliculata_contig9894:4718..4874Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 4719..4874 +
1693495240.4995832-CDS-P-canaliculata_contig9894:4718..48741693495240.4995832-CDS-P-canaliculata_contig9894:4718..4874Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 4719..4874 +
1622817350.8178282-CDS-P-canaliculata_contig9894:5040..51191622817350.8178282-CDS-P-canaliculata_contig9894:5040..5119Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 5041..5119 +
1693495240.510457-CDS-P-canaliculata_contig9894:5040..51191693495240.510457-CDS-P-canaliculata_contig9894:5040..5119Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 5041..5119 +
1622817350.8285878-CDS-P-canaliculata_contig9894:5491..56521622817350.8285878-CDS-P-canaliculata_contig9894:5491..5652Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 5492..5652 +
1693495240.5219114-CDS-P-canaliculata_contig9894:5491..56521693495240.5219114-CDS-P-canaliculata_contig9894:5491..5652Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 5492..5652 +
1622817350.841431-CDS-P-canaliculata_contig9894:6081..61641622817350.841431-CDS-P-canaliculata_contig9894:6081..6164Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 6082..6164 +
1693495240.531624-CDS-P-canaliculata_contig9894:6081..61641693495240.531624-CDS-P-canaliculata_contig9894:6081..6164Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 6082..6164 +
1622817350.854255-CDS-P-canaliculata_contig9894:6702..67781622817350.854255-CDS-P-canaliculata_contig9894:6702..6778Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 6703..6778 +
1693495240.5433514-CDS-P-canaliculata_contig9894:6702..67781693495240.5433514-CDS-P-canaliculata_contig9894:6702..6778Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9894 6703..6778 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig9894.24008.1

>prot_P-canaliculata_contig9894.24008.1 ID=prot_P-canaliculata_contig9894.24008.1|Name=mRNA_P-canaliculata_contig9894.24008.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=277bp
MDASEVRIDDKSHRKRIIFMRHAESEWNEVFNRGYGPWFVVRLVHSLVRE
AMMLTTRDSVFFDSPLSNRGIEQTQELLRFLQKPSDNFSSPKVSEAVAVM
RGGFTKSSVLVTSNLRRAIATGLITLWDRLRKGEERYLVHSALQEMTFNV
DGISMLDKGETPDEGLAKELGGQVTFDAEFNTGTKALGHTGMKRMKAFSE
WASQRPEDVVVAIGHSLYIRSFFRNFLPEEVEHFAKEKKIVNCGVVSFTI
VRGDYNGRAAYRIDPDSIVSVYGGFK*
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mRNA from alignment at P-canaliculata_contig9894:3195..8393+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig9894.24008.1 ID=mRNA_P-canaliculata_contig9894.24008.1|Name=mRNA_P-canaliculata_contig9894.24008.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=5199bp|location=Sequence derived from alignment at P-canaliculata_contig9894:3195..8393+ (Pelvetia canaliculata dioecious)
AGATGGACGCTAGCGAGGTGCGCATCGACGATAAATCCCATCGGAAAAGG ATCATTTTCATGCGGCATGCAGAATCTGAATGGAACGAGGTGCGGTTATT ATACACACACAGCGAACCAGTTCCTCGACGCACACGACTAGGCAACAATA TTTACCGAACAGAGTCACGGGACATGGCCCTTCCGTGATATGTCTTATTC TGGCCGAACTCTCCGCCACGCCTCTAATGAGCCTCTGCATGGTGCACGAA AGGGCAGCTTAGCCGCAAAACTACATTTAGCAAGGGCGGCGAATGTAGCA CGAGGTCGTGCCCGCGAGATTAGGATCGGTGCGATGTCATTTACCCGCCC GCTTCTCTTCTCACCGAAATGCGACGGTGCTTGAAACCTCATAGACGCTG ACGAGAATACACGGTCGCACGCAGTAGAAGTAGATCCCAATGCAACGGCG TGGGCGTGTTGGGGGGGGGAGTCTGCAGAGAGCGCTGGTTCCCGGCAGCG TATGTCTCTTGGTAGCGAGGAGAGCCCTGGACTTAAGGGACCTGTGCGGC TGGACAAATTATTTGTGGTAGTGAAGCGGAGAGTGAAAAATCAAGCGCCC TTCACAGCCATGTTGTTGGGAAAAGTTCTGCGTGTTCTTTGGGGAAGTTC TGCGTGTTCTTTGGGGAAGTTCTGCAGGAAGACCAGTGTCGCCGCCCCCC GACGAGGTGGAGGTGGTGCCCGAAAGCCTTGGAGCTATTCCTACAACAGC AGCAGCAGCAGCAAGCACGACCGACTTTTACTCTAATGCCCGATAAAGCA TGTCGTAAATGACCATCGTATTTTGTTTTGACAAACGCGAAACACCTCCA CCAGGTGTTCAACCGCGGATACGGGCCTTGGTTCGTGGTTCGGCTGGTGC ATTCCCTGGTGCGCGAGGCGATGATGTTGACGACCCGGGACAGCGTCTTC TTCGACTCTCCCCTCAGCAATAGGGGGATTGAACAGGTTCGTCCACCGTA CTCCTCCCTCTAGCACGGTCGATCAAACCATTTTGATATCCCGTGATTTT GTTTGCGTTACTTTGCGGGTCGAACGGTCGATCGCTTTTCCCGTCGTCTT TTCAGAGGATCCTTTCGTATAAGCGATGAAGGCTGACGCTGCTTTCTCCT TCTTCCTCGTGTCCCCGTGGGCTACATCCCTCCATCCCTCCTCAAAAACA GACCCAGGAGCTCCTCAGGTTCCTGCAGAAGCCCTCCGACAACTTCTCGT CCCCAAAGGTGAGAAATCGATAACAAATTCCCCCCTCCCCCCTCCCCTTC GCCTTCGCCCATTTCACGACATAGCTTGAGAGTGCTTGACAAAAGGATCC GCATTTTCTCATGTTAGGGTTTCCTCAAGAGTTTTCTTGTCTTGTGCATG TGGATCATCCGCTTCGTGTTTCGTCCCCGGCGAGGTTGACGTCGCCGGCC GGCGTCTCCCCACGCAGCCCCATCCCCCGATCCCTGCCTGCGTGGCCGGC GTCTCCACTGCATTGCCTCAACAGGTCTCGGAGGCGGTGGCTGTCATGCG AGGCGGCTTCACCAAGTCTTCCGTGCTCGTCACCTCCAACCTCCGACGGG CGATCGCGACGGGGCTGATCACGTTGTGGGATCGTCTCCGAAAGGGGGAA GAGCGCTACCTGGTTCACAGCGCACTGCAGGTCGAGAGAGCACTCATCTG CCCGGGTGGGGGTGCTGGGAGCACGGGAGCACTGCGTCCTGGTGTTTTGA TTGATATATGTACCGCGACGTCCTGAACCCTGTGCGATGTGAGCCGTCGC TTGGTTGTTGAGTACCCTTTTTTGTGTGTGCGCTGTGCGGTCGCAGGAGA TGACTTTCAACGTGGACGGTATATCTATGCTGGATAAGGGGGAGACGCCC GACGAGGGTCTTGCCAAGGAGCTCGGTGAGCCAATCGTCACTCCTGTCCG TTCGCGCGCTGTCAGGGAGGATGGAGCTTTGTCAGGGCGGTCTCTTATTT ACCTGCTTAGCTCTCTACCCCGCTTCAACATGCTAAAGAACGAAATCCTT GCATCTGTACGCCGCGAGCTTACATTTCATTCTGTTCCTGATGTACGTCG TTTGAGCTCCTCCCGGTGCTTCGCCCCTGTCCAAGGCGTTTATTCTTTCA GACATGTGAGGCGCGTACAGCAAATGTTAAACCACGACACTAACCTTCCT CCTCCTTGCCCCCCCCCCTCCCCCCCCCCGTGCTTGTGTTTAATAAACAA CTGATTATGGGAAACTTCCTCGAAAAATCGACGCGGTGGTCGCGTAGGCG GGCAGGTGACGTTTGACGCGGAGTTTAACACAGGCACCAAGGCGTTGGGT CACACGGGGATGAAGCGCATGAAAGCATTCTCGGAGTGGGCGAGCCAGCG GCCGGAGGACGTCGTGGTCGCCATAGGTCACTCTCTGTACATTCGCTCAT TCTTCAGGGTGAGGAAAGTAACTATAGATGCCGCCATACGCACTGTTGTG TTGGAGTTTTTGTTGCGTTTTTTAAAAGGCGTCGTTAGAGTCAATTTATG CTGCTGCGATTGCTTTCGCGGCACCTCGCGTTGCTGCTGCTGTTTCATTT TTATTTTTATTTTCCCGTCGATGCAGGCGATAGCACGGTACATCATGGAG ACGCGTCACTCTCGGCAATACCTCAATGCGTCCCGCCTCTCTCTAGATGG CAGCGTGTTTGGCCCTAGACGGGGGCGCGCACCAAACTCTGTCAACCCCA TCTCCCTCTCTTTCTCTCTCCTTTAACCCCCGCCTTCGCGTTCCCTGTCT CTCTATCCCTCCTTTCGCACCGCTCTCGGTGCCGCCGACGTGAAAACCAA CACGAATGAAATAAACACCCTTGCAACCTTGCAATAGAACTTCTTGCCCG AGGAAGTCGAACACTTCGCAAAGGAAAAAAAGATCGTCAACTGCGGTGTC GTGTCCTTCACCATCGTCAGGTCAGAATCAGCGATTGTACCGCCTACTTG GCTCTCGATCCCCCGTCCCTGGTAAAGCTGGGGACGGCTGGTTCATCCTG GTGGCCAGCTTGCAAGCCTCTTTTGTCGGTTGTACGCGGGAAAATGCGGG GACCCTAGGCGTCAAGGGGGGGAAAGTTTGTCTGTTGCGCGCGCGCGTCG CTTTCGCGCGCTTGGGCAGCTTTGGCGCGATTTCTCGCGTATGGTGTTGA TCACAGCCCGCGGCAACAGATTGCTATGGCTCGTTAACAAGGGATGTAGG ATTCAATCCTGTATTCGCGTGCATGTCTTGGGCGTAACCCAGATACTTGT TTTTTGCAAAAAACAGCGGAGCCATGGCTAGGGAACGCCATCTCCGGGGC TTACAAAGTCATCGTCGTCTGTCGGATTGCCGTTGTATCGTTATTTTCAA GGTTTGTATCCTAGTGCGGCAGACATGTGACTCTTTTGTTTAGCTTTCCT TCCCTGCTCACGAAATGCCCGATGATCGTATGTACTCAAACCACGTATCT GGCGACAGGGGTGACTACAACGGCCGGGCAGCGTACCGGATCGACCCAGA CAGCATCGTCAGCGTGTACGGCGGCTTCAAGTGAATAATACTGTAGAGGT GCCCTTGTCGCTGGCGGAATTAGCTTGCAGGGTAGGTCACAGGCATCGGG AGGTGTATTGATGTGGCGCTCCATGCGTAGGCAGCCAGGTTCAGACATAT AGAAAAGCAGCCATGACTGTTTCCGCTCGTCGACGTTGATTGGGGAGATC GGGAGACCGAGGGCATCATTCAAGCAGCGCTCCCTTCGAGGTCGCAGCGA TTTTTCCCGCTGGGCCTCTTGAGAGATGTGGGAACTAAATGGGTTAAAGA GTTATTCTGCGATAATGTCCCGGCAGCTTTTTAGTGTTGGCTTGCTGATG ACGTTGAACCGGAAGAGAAACTCGACCTTTCGCGGGGAACGGGAGAGGGG AGCGATAACCTCCACACACCCTATTTCAAGGAAAATATAAACAGGGGTGA TTTTTGTCTTATTCCCGCCCTCTGATGGAGCGTTTAGGGCTTTTGTAGGA AGGCGAACCTCGAGGGGAACCTACCTTAAGAACGAATGGAATCATGGGAC GATCGCTTGGTTTAACAAGACGACGTTTTTCAGGCGGTGCACCGCTGGTT ATACCAAGCATAGAGACTTGAGACTTTTGATGAAAACGCGCGACGATGAT CGAGGCTCCCCTTCGCACGTACTTTGTTTGCTACGCGTGTCTTCGGGTGC GTCTTTCGCTCGACATATCTCTGGCGATGAATGTAACGAACACTAGCCTG AGCTATGCGTTAGACCTGCAGGCTATTATAGTACTAATAGCTCTTGATCT CAGTACTGTAGTACCAGTATTAATCTCGACACATGGGCACGACGCCACTT ATATAGTAGCTCTAATAAATGTTGACACACATATAATAGCTGGGCAAATG TGGCGGTCGCCAAGGCGGAAAAAGAGCGGCGAGAAATATATCCTGGTTGG AGACGGTGGGTTATGGGGGATTTTTCTACGCAGGGCTTCTGACGGGTGAA CAATCTCGATTAAATGGTTCGTACCGTAGCTTGCTGGAGTTTTATCTACC TCGTCACCTAGTCGAACTCGAGCTGATTATGATTCGACATTTGTCAACGA CAGTCGAAAGGAGTACTTTTGACGGGGGGGGGGGAGCTAGGTATTCTAAT AAGCCCTTTCTACGAGTCAGAGCTGCTTGATATTTTTTGTTCGTTTTTGT TTTCGGTCGTAACGATGGGAAAAAATTGAACCTCTTCCGTAGACTCCTCC TACGTGATGGTATAATCTTGCTGAGAATCTGCTCACCGATCGCCTTTTTC AGAGCACTAACGTTAGCGGTCGGAATAGAGATTATACCGCGGTCTAGTCT GTAGTGCTACTATATTAATAGCCACCGGCCATGACATGGTCGTCGCGCCC TAAGACGTCCCGGTAGTGAGCAAGCATAATGAACAGTTTGTTGTTGCAGA AGGAATGTGTTCACGGTAAAAAGTCCCTACAGGGACTTGTTGGAAAACGT AAATATACCTCTCTTCACCAATTATAGAACGTTCCTTGTGTTCTAGACTA AAAGCCTCTATTGCTACAAGGTTCAATGGCACTATTATCTTGTAATATTA TTAACCATTTAATCATGTACTACATCGATATGCAGGCGCCCCGAAAGCC
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Coding sequence (CDS) from alignment at P-canaliculata_contig9894:3195..8393+

>mRNA_P-canaliculata_contig9894.24008.1 ID=mRNA_P-canaliculata_contig9894.24008.1|Name=mRNA_P-canaliculata_contig9894.24008.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1662bp|location=Sequence derived from alignment at P-canaliculata_contig9894:3195..8393+ (Pelvetia canaliculata dioecious)
ATGGACGCTAGCGAGGTGCGCATCGACGATAAATCCCATCGGAAAAGGAT
CATTTTCATGCGGCATGCAGAATCTGAATGGAACGAGATGGACGCTAGCG
AGGTGCGCATCGACGATAAATCCCATCGGAAAAGGATCATTTTCATGCGG
CATGCAGAATCTGAATGGAACGAGGTGTTCAACCGCGGATACGGGCCTTG
GTTCGTGGTTCGGCTGGTGCATTCCCTGGTGCGCGAGGCGATGATGTTGA
CGACCCGGGACAGCGTCTTCTTCGACTCTCCCCTCAGCAATAGGGGGATT
GAACAGGTGTTCAACCGCGGATACGGGCCTTGGTTCGTGGTTCGGCTGGT
GCATTCCCTGGTGCGCGAGGCGATGATGTTGACGACCCGGGACAGCGTCT
TCTTCGACTCTCCCCTCAGCAATAGGGGGATTGAACAGACCCAGGAGCTC
CTCAGGTTCCTGCAGAAGCCCTCCGACAACTTCTCGTCCCCAAAGACCCA
GGAGCTCCTCAGGTTCCTGCAGAAGCCCTCCGACAACTTCTCGTCCCCAA
AGGTCTCGGAGGCGGTGGCTGTCATGCGAGGCGGCTTCACCAAGTCTTCC
GTGCTCGTCACCTCCAACCTCCGACGGGCGATCGCGACGGGGCTGATCAC
GTTGTGGGATCGTCTCCGAAAGGGGGAAGAGCGCTACCTGGTTCACAGCG
CACTGCAGGTCTCGGAGGCGGTGGCTGTCATGCGAGGCGGCTTCACCAAG
TCTTCCGTGCTCGTCACCTCCAACCTCCGACGGGCGATCGCGACGGGGCT
GATCACGTTGTGGGATCGTCTCCGAAAGGGGGAAGAGCGCTACCTGGTTC
ACAGCGCACTGCAGGAGATGACTTTCAACGTGGACGGTATATCTATGCTG
GATAAGGGGGAGACGCCCGACGAGGGTCTTGCCAAGGAGCTCGGAGATGA
CTTTCAACGTGGACGGTATATCTATGCTGGATAAGGGGGAGACGCCCGAC
GAGGGTCTTGCCAAGGAGCTCGGCGGGCAGGTGACGTTTGACGCGGAGTT
TAACACAGGCACCAAGGCGTTGGGTCACACGGGGATGAAGCGCATGAAAG
CATTCTCGGAGTGGGCGAGCCAGCGGCCGGAGGACGTCGTGGTCGCCATA
GGTCACTCTCTGTACATTCGCTCATTCTTCAGGGCGGGCAGGTGACGTTT
GACGCGGAGTTTAACACAGGCACCAAGGCGTTGGGTCACACGGGGATGAA
GCGCATGAAAGCATTCTCGGAGTGGGCGAGCCAGCGGCCGGAGGACGTCG
TGGTCGCCATAGGTCACTCTCTGTACATTCGCTCATTCTTCAGGAACTTC
TTGCCCGAGGAAGTCGAACACTTCGCAAAGGAAAAAAAGATCGTCAACTG
CGGTGTCGTGTCCTTCACCATCGTCAGAACTTCTTGCCCGAGGAAGTCGA
ACACTTCGCAAAGGAAAAAAAGATCGTCAACTGCGGTGTCGTGTCCTTCA
CCATCGTCAGGGGTGACTACAACGGCCGGGCAGCGTACCGGATCGACCCA
GACAGCATCGTCAGCGTGTACGGCGGCTTCAAGTGAGGGTGACTACAACG
GCCGGGCAGCGTACCGGATCGACCCAGACAGCATCGTCAGCGTGTACGGC
GGCTTCAAGTGA
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