prot_P-canaliculata_contig989.24006.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig989.24006.1
Unique Nameprot_P-canaliculata_contig989.24006.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length2881
Homology
BLAST of mRNA_P-canaliculata_contig989.24006.1 vs. uniprot
Match: D8LKF7_ECTSI (TFIIS central domain-containing protein (Fragment) n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKF7_ECTSI)

HSP 1 Score: 1023 bits (2644), Expect = 0.000e+0
Identity = 875/1680 (52.08%), Postives = 1005/1680 (59.82%), Query Frame = 0
Query:  964 GSYQRLVMDLTAAGQGDLGWHSWRARASRAATVPRVTPGSSGVDSSPAPKVTLAEARALLNAASSGGDGRAGTSAA-VAPLRGDALRLATASRELAALRAAVEAKDAAIKLALGGRRGRGVGGGDRGWGSEFAAAPPTKWREAVALGRRGEGATAGPRR----EWEAWVASVTGLVEGMAGLLXXXXXVAPSLESSLERHLEMRIKAGRWLVVAGRYVFFTAIGMNGQRSLPTLSSLETLLDTAP----SKTPPYTPAEDA--VASEEGREGGKVGG----RSERAVVVSLLGRVTDLRDAAVAWATEASALLSRLGGEARGGARAVAGVKD-SARCIEALLAQDVVHAIQMPEEKALRKALLEQGQWKPKVISLLSAPLTQAPAALGASRESDPGAWLARARDLLQRAPPPMPTPTLAGSAHMALLKWAITVMEMADAVRAAAAGSKAAPNFGNRPKLVEMEPLADQGRALLASXXXXXXXXXXXTAAGSETADLLAAVGIAAPQGVAP--AAIPSQHLHLRLSDGPLFAVTAVSAVVRGVYACRRWVEGAKALTSRRG-----LDGASAATLVRELQANRQLPYAV-----GGTLRTTLAHELSLKAPDNPELAHHLGRHGGALSWGGSSTIFVNCDEDDE-MAGALDINDMDWVGEG-LGGMSGTIDVV-----TVSPVKTPKHATVDLAA-----SPAAPAPATGFM-----RNG-TASVVAPAVTPALTRTSALSRAAAAKPPPPLFAGSSAGRTRGSRNQRASPFNLKACSACKKDRASPIKCRSGAGGQQPGKLI-ANAAIAAAAI--GAKNPSRAAASSSFKSQGPRRVPGPETASSLLDRMLGSAALPPRAPAPVVPSVVPAPRVAPGGPLAGGVGIKRPRCLAPGCMNAVARDAPFCSDDCVVNAQRQAVQALVSSRASAARGASRSXXXXXXXXXXXXXXXXXTTNNGSAGGDAATVGDGXXXXXXXXXXXXXXXXXXXXXXXXXXAPGAWTPQDEEEFAKGLEAVRGRSAQNATQRFRNKVMDRFRELFAEGINELGVDSMDVAVFSGVLAWDLEHELNAFSRSDRGVYKEKAQSLRFNIKFAKNPELFKDLLTGGTSMKTLCGMTTDELASSHLKEERKRIRDESYAGHLRQEDEGNEIVYKDGALQKIAKVKSEAKKQGLAVTAASITGGNTASXXXXXXXXXXXXXXXXTGAKKARRSGTXXXXXXXXXXXGVGGGAGVVVKMDEEVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEEXXXXXXXXXXXXEGVQVGVGGTSERLGAPDLKRRLSGSSDVGVDGEEVGGGIETAKRIK-MLSVGSPIIDDVPKFEFPSSPLPTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------KRDQDGVNGRAG-DEDRSSADKLESGSPVDDTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGVGSRMANPPPEKIEGMTHIIPKPGRGGRPVKGGNFAINEPGREPFYVYAYHAGTPDQCADLQRLLPRNVDVDGRVAIGNLNGTMKSRQEGSVRVLVLRPGGGGPNNPNVCSRFCNDFATYKNQGRAGYCFKQFDKKHVEFLYLLPPALAHQVPLLAQYPAAYGHLVCLVVTI 2578
            GS + LV  + AAG   LGWHSWR  A+RAA      PGS   + SP  K TLA+  ALL+A  S G+G  G+ A  VA L G AL  A AS E AALR AV AKDAA  +A   R     G G  GWG  F A P T W+EAVA+   G     G RR    EWE W  S +GLVEGM G+L      APSL S+LE  L+ RI+AGRWLV +G  +F T     G R +PTL S ETL+ T P    S T PY P +DA  V  +   +G  V      R   AV   +L  + +LR  A +W TEA  LL+  GG       A   + D SA+ +EALLA+DVV A+Q+PEEK LR AL   GQW PKV+++L+ P+        A    D G WLA AR LL +AP  +P     GS+H+ALL+W I V E A  + AA  G   + N  +RP   +MEPLA++G+ LL                G+  A LL+AVGIA P GV P  AA P   L LRL DGPL A++ V AV RGV ACR+WV GA AL S  G     LDGAS+A LV+ELQANRQLPYAV     GG LR TLAHELSLKAP++PELAHHLG   G  S+GG +   V+ ++D E MAGA+D++D+ W     L      IDVV     T +P   P  A   LA      S A PA + G       RNG T S  A  +     +T++++RA     PPPLF   +A  TRGSRNQR SPFNLKACSACKK R S + C  G  G++PG    A  A AAAA+   A                  R P  E+ASSLLDRMLG+AALPP  PAPVV + VPAPRVAPG P  GG G+KR R L  GC   V RD  FCSDDCVV+AQRQAV ALV+            XXXXXXXXXXXXXXXXX      A G     G          XXXXXXXXXXXXXXXXXX+ G  T +DE+ FAKGLEAVR RSAQ A QRFR+KVMDRFRELFA+G+ ELGVD+ D AV  G+LAWDLEHELNAFSR++RGVYKEKAQSLRFNIKFAKNPELFKDLL+GGTSMKTLCGM+TDELASSHLKEERKRIRDESYAGHLRQEDEGNEIVYKDGALQKI KVK+EA KQ L                               G  K++                  GG+            XXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXXXXXXXXXXX          SE L     KRRLS SSD+        G    AKR+K +L+VGSPII DVPK EFPS+PLP  XXXXXXXXXX                                              XXXXX              +      +  A  D D   ++   S +  D   XXXXXXXXXXXXXXXXXXXX           XXXXX          PPPE +EGMT + PKPG+ GR  K  NF INEPGREPFYV+A+H G P+ C DLQ  LPRN+DVDGRV++ NLNGTMKSR  GS+RVLVLRPGGGGP+NPNV +RFC +FA YKNQGRAGYCFKQFDKKHVEFLYL+PPALA QVPLLAQ PAA GHLVCLV+T+
Sbjct:   81 GSGRELVAQIVAAGVRSLGWHSWRVLAARAAF--NALPGS---NPSPPAKPTLADGHALLDAVISPGNGSGGSGAKPVAVLEGAALATAAASAEFAALREAVAAKDAAATMAWKWRDAATSGSGGGGWGRAFPAPPSTTWKEAVAVAAGG-----GQRRHVVAEWETWRKSASGLVEGMEGVLAGVVDAAPSLRSALEVQLQARIEAGRWLVASGGVLFPT-----GGR-IPTLDSTETLVQTPPPPSFSATAPYKPGDDALPVGDDPASDGASVAAAANQRQSAAVFADVLAGLQELRGEASSWLTEARGLLAGAGGXXXXXXXAAVAMTDGSAKAVEALLARDVVRAMQLPEEKLLRDALQSHGQWDPKVLAILTVPVA-------AGGGVDSGGWLAPARTLLAQAPTTLPP----GSSHLALLRWTIAVGETAQVMLAATTGGAMSFNE-SRPAFTDMEPLAERGKTLLLG--------------GTGVATLLSAVGIAPPAGVVPLLAAAPPAPLSLRLGDGPLTALSTVEAVTRGVDACRQWVAGATALASPGGXXXXXLDGASSARLVQELQANRQLPYAVDGAGFGGGLRATLAHELSLKAPEHPELAHHLGSSVG--SFGGVANGIVDDEDDAEGMAGAIDMSDVGWASSSDLDSAMAAIDVVGAATTTEAPPPAPAPAVYPLAREQHRHSGATPAGSRGXXXXXXXRNGGTISARAAGL-----QTASVARAV----PPPLFTNPAAPTTRGSRNQRTSPFNLKACSACKKGRIS-VDC--GPDGERPGSPHNARTAAAAAAVRDAAXXXXXXXXXXXXXXXXXXRSPAAESASSLLDRMLGTAALPPPPPAPVVKAAVPAPRVAPGAPAIGGAGLKRTRKLTAGCDKPVGRDVAFCSDDCVVSAQRQAVHALVAYHQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVGANGEEG---------VXXXXXXXXXXXXXXXXXXSSGGCTAKDEQAFAKGLEAVRARSAQTAGQRFRHKVMDRFRELFADGMAELGVDAADAAVLCGMLAWDLEHELNAFSRTNRGVYKEKAQSLRFNIKFAKNPELFKDLLSGGTSMKTLCGMSTDELASSHLKEERKRIRDESYAGHLRQEDEGNEIVYKDGALQKIDKVKAEATKQML------------------------------EGGSKSK------------------GGSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSELL-----KRRLSASSDLXXXXXXXXG--SAAKRMKRLLAVGSPIIGDVPKLEFPSAPLPXXXXXXXXXXXXPPGPGDDSDDPDDGGLRTTDVGRGIGGGDGVESDGDEGSGNTAKRKXXXXXXXXXXXXXXXXXLPRLSSPPASPNADIDMDNGLSEPRFSATNEDXXXXXXXXXXXXXXXXXXXXXXXAKEVKPSRHSAXXXXXXXXXXXXPVTPPPE-VEGMTRVAPKPGKAGRAAKSENFVINEPGREPFYVHAFHGGGPEHCVDLQGRLPRNLDVDGRVSMTNLNGTMKSRAAGSIRVLVLRPGGGGPHNPNVLNRFCQEFAAYKNQGRAGYCFKQFDKKHVEFLYLVPPALAPQVPLLAQNPAAQGHLVCLVITV 1639          
BLAST of mRNA_P-canaliculata_contig989.24006.1 vs. uniprot
Match: D8LKF5_ECTSI (PHD-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF5_ECTSI)

HSP 1 Score: 816 bits (2107), Expect = 1.280e-264
Identity = 475/736 (64.54%), Postives = 555/736 (75.41%), Query Frame = 0
Query:   15 LPSSDEDFWAAVGAQQVIEGSSIL-SWKQAGT-PATERPGGIGGSTR--TKNKGRGGAAAAYGNDA----LWCALCDDKTEGRWLTRCKGAGGN-GSRQQQTCSIWVHPACAWQNEGYAMRCIAGSTG--SSESETRVPTVFFACLQHDKPATYCSCKREEGDNKEEAEDYIECESCNEWYHFSCEGLDEADPPDVYNCKRCRQLTAKGQKVSAQERRRNKAKTNEYMSQMLANKVMNIQQWMKEVKTLAGVSRLNAPANPAERAEEQAAVQGRYATLKELLARREELEAPLEDEESEEXEMPTSARGRGKXXXXXXXXXXXXXXXXXXXXXXXXXGTADESKIIAGMEGVYAVTSATLEEVDDEAEAMETAVDTWFDEHTEPYYKKSDGGGRLGYWNTSVAALEGEVAELEALVETARSARAVSPAAVAVADDALAAARWALRAVRLFAGGGGGSGSWGLPMLAEVSTLLDTAEEAMTTSADRRGRANSAWEHLDEIRSMATQWIRRAKTCLRSDGAAAGVTLAVMRRHLSSGDAIPVVMPEYQELERVAFEWEAWEARALRRVAALEAVPLEELADTTTI--------SGETDAEGSQLLREAEAFAYGVKTSARDALVRALGRRGWAQRACAVVSSSSAGIARPGVALAKSLMTEAGKLGLLKSYSGSGAGLIGRVRGLAEGEGPVKRARELLVAPANGGLGEHSLELELSEAEGVLDALRSSPVVYPEEETL 731
            L SSDEDFWAAV AQ   EGSS   +W+Q G  P T    G  G  R  T+ K +G AAAA   +     + CALC+DK+EGRW+TRCKG+GG  G+RQQQTC+IWVHPACAWQNEGYAMR IAGS+   +   + R+PTVFFAC  HDKPATYCSCKREEG++++  EDYIECESCNEWYHFSCEGLDE +PP+ Y+CKRCRQL AKGQKV AQERRRNKAKTNEY+S+MLANKVM IQQW+KEVK LA  +                    RYA++K+LLARREELEAPLE      X           XXXXXXXXXXXXXXXXXXXXXXXX G  ++ K++ GM GVYA  SA LE V +E++  E AVD WFDEH EPYYKKSDGG RLGYW TSV+ LE EV +LE LV +ARSARA  PAAVA A+DALAAARW L+AV L  GG G +G+ GLP  +EVS LLD A EAM TSADRRGRAN+AW+H+++IRSMATQWIRRAKTCLR+DGAAAGVTLAVMRRHLSSGDA+PV MPEY ELERVA EWEAWE+RALR  A LEAVPLE+LA T T+        +G+ D + S LL+EA AF++G+KTSA+DAL RALGR+GWAQRA AV+S  + GIARP VAL +SLMTEAGKLGLL++  G+ + L+ +V+ LAEGEGP  RAR+LL     GGL E S + EL  AEGVL  LR++PVVYPEEE++
Sbjct:    2 LTSSDEDFWAAVAAQVAKEGSSTTPAWRQVGVAPPTSPSSGDSGHGRAGTRGKAKGPAAAASAAEVEAAGVCCALCEDKSEGRWVTRCKGSGGGTGTRQQQTCNIWVHPACAWQNEGYAMRSIAGSSRLTADGEKRRLPTVFFACPLHDKPATYCSCKREEGEDEDGEEDYIECESCNEWYHFSCEGLDEDNPPERYSCKRCRQLAAKGQKVPAQERRRNKAKTNEYLSEMLANKVMQIQQWVKEVKVLAATNTAXXXXXXXXXXXXXXXXXARYASVKDLLARREELEAPLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDEEDGKVVHGMGGVYAEASALLESVAEESDRAEGAVDEWFDEHPEPYYKKSDGGARLGYWKTSVSPLEAEVGQLEQLVASARSARAGPPAAVAAAEDALAAARWVLKAVVLLTGGAGXAGAAGLPAFSEVSALLDNAGEAMATSADRRGRANTAWQHVNDIRSMATQWIRRAKTCLRADGAAAGVTLAVMRRHLSSGDAVPVDMPEYHELERVATEWEAWESRALRCAATLEAVPLEDLAGTLTVCSPTPPGENGKADEDASGLLQEAAAFSHGIKTSAKDALTRALGRKGWAQRAVAVISCEAVGIARPSVALTQSLMTEAGKLGLLRAAGGAVSPLVTKVKALAEGEGPATRARDLLKPVEEGGLSEASSDAELCGAEGVLGNLRATPVVYPEEESV 737          
BLAST of mRNA_P-canaliculata_contig989.24006.1 vs. uniprot
Match: A0A6H5KV96_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV96_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 5.790e-59
Identity = 160/272 (58.82%), Postives = 179/272 (65.81%), Query Frame = 0
Query:  240 MNIQQWMKEVKTLAGVSRLNAPANPAERAEEQAAVQGRYATLKELLARREELEAPLEDEESEEXEMPTSARGRGKXXXXXXXXXXXXXXXXXXXXXXXXXGTADESKIIAGMEGVYAVTSATLEEVDDEAEAMETAVDTWFDEHTEPYYKKSDGGGRLGYWNTSVAALEGEVAELEALVETARSARAVSPAAVAVADDALAAARWALRAVRLFAGGGGGSGSW---------GLPMLAEVSTLLDTAEEAMTTSADRRGRANSAWEHLDEIR 502
            M IQQW+KEVK LA  +   A                 YA+LKELLARREELEAPL       X           XXXXXXXXXXXXXXXXXXXXXXXX G  ++ K++ GM GVYA  SA LE V +E++  E AVD WFDEH EPYYKKSDGG RLGYW TSV  LE EV +LE LV TARSARA  PAAVA A+DALAAARW L+AV L  GG GG             GLP  +EVS LLD A EAM TSADRRGRAN+AW+H+++IR
Sbjct:    1 MQIQQWVKEVKVLAATNTAGAXXXXXXXXXXXXXXXXXYASLKELLARREELEAPLXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGDEEDGKVVHGMGGVYAEASALLESVAEESDRAEGAVDEWFDEHPEPYYKKSDGGARLGYWKTSVGTLEAEVGQLEKLVATARSARAGPPAAVAAAEDALAAARWVLKAVVLLTGGAGGGAPXXXXXXXXXXGLPAFSEVSALLDNAGEAMATSADRRGRANTAWQHVNDIR 271          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig989.24006.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LKF7_ECTSI0.000e+052.08TFIIS central domain-containing protein (Fragment)... [more]
D8LKF5_ECTSI1.280e-26464.54PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KV96_9PHAE5.790e-5958.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 404..424
NoneNo IPR availableCOILSCoilCoilcoord: 281..301
NoneNo IPR availableGENE3D2.60.120.650coord: 152..296
e-value: 5.4E-12
score: 47.4
NoneNo IPR availablePANTHERPTHR23202WASP INTERACTING PROTEIN-RELATEDcoord: 1833..2819
coord: 256..1927
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1148..1167
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1168..1185
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1186..2880
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..1124
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 1125..1147
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 157..206
e-value: 6.5E-9
score: 45.6
coord: 78..152
e-value: 31.0
score: 0.3
IPR003618Transcription elongation factor S-II, central domainSMARTSM00510mid_6coord: 1941..2047
e-value: 2.8E-10
score: 50.1
IPR003618Transcription elongation factor S-II, central domainPFAMPF07500TFIIS_Mcoord: 1945..2052
e-value: 2.0E-19
score: 70.1
IPR003618Transcription elongation factor S-II, central domainPROSITEPS51321TFIIS_CENTRALcoord: 1947..2064
score: 17.516
IPR036575Transcription elongation factor S-II, central domain superfamilyGENE3D1.10.472.30coord: 1937..2048
e-value: 2.3E-14
score: 55.6
IPR036575Transcription elongation factor S-II, central domain superfamilySUPERFAMILY46942Elongation factor TFIIS domain 2coord: 1940..2039
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 158..205
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 155..208
score: 8.92
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 150..211

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig989contigP-canaliculata_contig989:889..26537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig989.24006.1mRNA_P-canaliculata_contig989.24006.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig989 763..26832 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig989.24006.1 ID=prot_P-canaliculata_contig989.24006.1|Name=mRNA_P-canaliculata_contig989.24006.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=2881bp
MASKNTPSRVRRIPLPSSDEDFWAAVGAQQVIEGSSILSWKQAGTPATER
PGGIGGSTRTKNKGRGGAAAAYGNDALWCALCDDKTEGRWLTRCKGAGGN
GSRQQQTCSIWVHPACAWQNEGYAMRCIAGSTGSSESETRVPTVFFACLQ
HDKPATYCSCKREEGDNKEEAEDYIECESCNEWYHFSCEGLDEADPPDVY
NCKRCRQLTAKGQKVSAQERRRNKAKTNEYMSQMLANKVMNIQQWMKEVK
TLAGVSRLNAPANPAERAEEQAAVQGRYATLKELLARREELEAPLEDEES
EEEEMPTSARGRGKKGAKGKAKKGNARSNSGGGDGGDGGGTADESKIIAG
MEGVYAVTSATLEEVDDEAEAMETAVDTWFDEHTEPYYKKSDGGGRLGYW
NTSVAALEGEVAELEALVETARSARAVSPAAVAVADDALAAARWALRAVR
LFAGGGGGSGSWGLPMLAEVSTLLDTAEEAMTTSADRRGRANSAWEHLDE
IRSMATQWIRRAKTCLRSDGAAAGVTLAVMRRHLSSGDAIPVVMPEYQEL
ERVAFEWEAWEARALRRVAALEAVPLEELADTTTISGETDAEGSQLLREA
EAFAYGVKTSARDALVRALGRRGWAQRACAVVSSSSAGIARPGVALAKSL
MTEAGKLGLLKSYSGSGAGLIGRVRGLAEGEGPVKRARELLVAPANGGLG
EHSLELELSEAEGVLDALRSSPVVYPEEETLALRLDALRWNEAAAKGLAE
FIPYPQLLHLHEQITTSAQLEAVVEGFKTCMPLYTKVSKVKRWQERAQKL
LEAVRGAVAAGAAATDGGGVGIAGEAGSLRQLVEACLSELQADLKVSDVP
EAVELSDFLQEVRAWEQEVARVSMSGMSSTAEELLRLASAGQRVITLPQV
VEALRWRAECLRVARGGHGVDAEGVAALVAAGDALSQWSKAAPAVASVES
SGGAENGGGGGVDGSYQRLVMDLTAAGQGDLGWHSWRARASRAATVPRVT
PGSSGVDSSPAPKVTLAEARALLNAASSGGDGRAGTSAAVAPLRGDALRL
ATASRELAALRAAVEAKDAAIKLALGGRRGRGVGGGDRGWGSEFAAAPPT
KWREAVALGRRGEGATAGPRREWEAWVASVTGLVEGMAGLLAGLVGVAPS
LESSLERHLEMRIKAGRWLVVAGRYVFFTAIGMNGQRSLPTLSSLETLLD
TAPSKTPPYTPAEDAVASEEGREGGKVGGRSERAVVVSLLGRVTDLRDAA
VAWATEASALLSRLGGEARGGARAVAGVKDSARCIEALLAQDVVHAIQMP
EEKALRKALLEQGQWKPKVISLLSAPLTQAPAALGASRESDPGAWLARAR
DLLQRAPPPMPTPTLAGSAHMALLKWAITVMEMADAVRAAAAGSKAAPNF
GNRPKLVEMEPLADQGRALLASSSSSTSTGGGATAAGSETADLLAAVGIA
APQGVAPAAIPSQHLHLRLSDGPLFAVTAVSAVVRGVYACRRWVEGAKAL
TSRRGLDGASAATLVRELQANRQLPYAVGGTLRTTLAHELSLKAPDNPEL
AHHLGRHGGALSWGGSSTIFVNCDEDDEMAGALDINDMDWVGEGLGGMSG
TIDVVTVSPVKTPKHATVDLAASPAAPAPATGFMRNGTASVVAPAVTPAL
TRTSALSRAAAAKPPPPLFAGSSAGRTRGSRNQRASPFNLKACSACKKDR
ASPIKCRSGAGGQQPGKLIANAAIAAAAIGAKNPSRAAASSSFKSQGPRR
VPGPETASSLLDRMLGSAALPPRAPAPVVPSVVPAPRVAPGGPLAGGVGI
KRPRCLAPGCMNAVARDAPFCSDDCVVNAQRQAVQALVSSRASAARGASR
SGAGTGAGAGGAAAAVASTTNNGSAGGDAATVGDGGAGGTGAGGGGGSTV
GAAGASASSASAPGAWTPQDEEEFAKGLEAVRGRSAQNATQRFRNKVMDR
FRELFAEGINELGVDSMDVAVFSGVLAWDLEHELNAFSRSDRGVYKEKAQ
SLRFNIKFAKNPELFKDLLTGGTSMKTLCGMTTDELASSHLKEERKRIRD
ESYAGHLRQEDEGNEIVYKDGALQKIAKVKSEAKKQGLAVTAASITGGNT
ASITGSNTAITGTDTALTTGAKKARRSGTGSSPSTGSGSSGVGGGAGVVV
KMDEEVEGGSGGGQGSEGGGGAGKKPGVGASVEGGGGEEEGDEEGEEEEE
EDEGVQVGVGGTSERLGAPDLKRRLSGSSDVGVDGEEVGGGIETAKRIKM
LSVGSPIIDDVPKFEFPSSPLPTIPSAPNLDVPPVPSPPGPEDDSDDDDM
SDLRGRPAEVDSDESDSTGRVGHGDSGDSVGSVGSKRDQDGVNGRAGDED
RSSADKLESGSPVDDTDMDLDDDDDDEPPSMSSSFDWSKSSGAAAAGAGE
GEGASGVGSRMANPPPEKIEGMTHIIPKPGRGGRPVKGGNFAINEPGREP
FYVYAYHAGTPDQCADLQRLLPRNVDVDGRVAIGNLNGTMKSRQEGSVRV
LVLRPGGGGPNNPNVCSRFCNDFATYKNQGRAGYCFKQFDKKHVEFLYLL
PPALAHQVPLLAQYPAAYGHLVCLVVTIHGSGREPSGAPATGANRPTAVP
AAQAQALPPPPTPHLHQHFKQQQQQQQHQQQPQYLQHPPHGTFPPTASTA
PPAQQVIQPRPQQRQQHPAPPGPPPRTRLVGGSALPPPPPPPPHSPALPG
TPTASVTQMMWNAPPHVDQAVGPAGPPAAAPEVAPAPLQHAVAPAPSQGH
LQSRPPPPPPPPPPRAAQAAFGVEGATQAYQAPPPPPKQQHPSRQQHPQE
QQQQQVQQQVHQQHPLARPIAERIVAMGPQELEAMRMLPDARTQYPFIFD
GHPGFGAFRDTLATLVMPRLQQGAGDSAGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR003618TFIIS_cen_dom
IPR036575TFIIS_cen_dom_sf
IPR019786Zinc_finger_PHD-type_CS
IPR019787Znf_PHD-finger
IPR011011Znf_FYVE_PHD