prot_P-canaliculata_contig985.23960.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig985.23960.1
Unique Nameprot_P-canaliculata_contig985.23960.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length353
Homology
BLAST of mRNA_P-canaliculata_contig985.23960.1 vs. uniprot
Match: D8LNE9_ECTSI (Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNE9_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 2.890e-134
Identity = 207/331 (62.54%), Postives = 251/331 (75.83%), Query Frame = 0
Query:   24 LFLLGSLRGGSSFLSPFAPIARKASLLRKT------NAEASDVDSMTPAQEKAPSDSPPAGLAMEEEESDSGMAKSPAGLTLEGVYRKLKLETQGLDDGIVGLESKDTDYGVEIVKSKLIRKPTLGIQLEEVARGGDGRGLVLVAGVEPRGNAEASGQIFVGDTLCWVGVEPTRMTRVEALDWDLTVSALSSLADVREITVVCKRLVKRKTINVKFELPDGDKTYDIKTGSNLRGEMIRLDVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEIQEGAELLTPADREEDMLISKGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTEWREQ 348
            L L   LR G+SFL P   I R +    ++       A  +D D+   A      +      A  E+E D G+A+SP+GLTL+GVY++L LETQ   DG+VGLESKDTDY +E+VK ++ RKP+LG+QLEEVARGGDGRGLVLVAG+EP GNAEASG+I VGDTLC  G+E   M+RVEALDWD TVS L S A+  EI +V KRLVKR++INV+FELP G + ++IK GSNLRGEMIRLDVPVYDP+T R+DQPYATGNCAGEG CGTCFVE+Q+GA+LLT  D+EE ML+S+GNLP+RWRLSCK IVG+EN  GTVR+KAVPQ EWR Q
Sbjct:   11 LLLALQLRNGASFLLPSPAITRCSGFASRSASCGVMRASEADGDAEETASLNVEDE------AKVEDEGDDGLARSPSGLTLDGVYKRLTLETQSRADGVVGLESKDTDYAIEVVKVQMQRKPSLGMQLEEVARGGDGRGLVLVAGLEPGGNAEASGKICVGDTLCSAGIEGD-MSRVEALDWDQTVSVLGSFAEESEIVLVIKRLVKRESINVQFELPSGSRDHEIKAGSNLRGEMIRLDVPVYDPRTKRFDQPYATGNCAGEGTCGTCFVEVQQGADLLTSPDQEELMLLSRGNLPVRWRLSCKVIVGKENKAGTVRLKAVPQAEWRSQ 334          
BLAST of mRNA_P-canaliculata_contig985.23960.1 vs. uniprot
Match: A0A836CRA8_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CRA8_9STRA)

HSP 1 Score: 248 bits (632), Expect = 3.330e-77
Identity = 136/262 (51.91%), Postives = 173/262 (66.03%), Query Frame = 0
Query:   96 GLTLEGVYRKLKLETQGLDDGIVGLESKDTDYGVEIVKSKLIRKPTLGIQLEEVARGGDGRGLVLVAGVEPRGNAEASGQIFVGDTLCWVGVEPTR-MTRVEALDWDLTVSALSSLADVREITVVCKRLVKRKTINVKFELPD-----------GDKTYDIKTGSNLRGEMIRLDVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEIQEGAELLTPADREEDMLISKGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTEW 345
            G++LEG+Y++LK+E   LD+GI+GLES+D  +G+EIV                       RGLVL+  V   GNA  SG I  GDTL +VG E  R MTRVE  D+D TV+AL   AD+ EIT+V KRLV+RKT+ V FE P            G +   +  GSNLR EMIR D+PVYD KT R+DQPYATGNC GEGICGTCFVE+QEGAELL+P D  E+M++   NLP RWRLSC+T+VG +N  G VR++++PQ+ +
Sbjct:   41 GVSLEGIYKRLKIEILDLDEGIIGLESRDPAFGIEIV-----------------------RGLVLIGDVG--GNAAESGLINTGDTLTYVGNEAARDMTRVEGQDYDTTVAALGKYADLAEITLVLKRLVQRKTLEVTFETPTAYAEDGTAVEWGGQGVQMLAGSNLRSEMIRRDIPVYDAKTRRFDQPYATGNCGGEGICGTCFVEVQEGAELLSPPDGLENMVMR--NLPRRWRLSCRTVVGGKNEAGQVRLRSIPQSAY 275          
BLAST of mRNA_P-canaliculata_contig985.23960.1 vs. uniprot
Match: A0A7S4DIM7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIM7_HETAK)

HSP 1 Score: 241 bits (614), Expect = 4.210e-74
Identity = 127/262 (48.47%), Postives = 172/262 (65.65%), Query Frame = 0
Query:   84 EESDSGMAKSPAGLTLEGVYRKLKLETQGLDDGIVGLESKDTDYGVEIVKSKLIRKPTLGIQLEEVARGGDGRGLVLVAGVEPRGNAEASGQIFVGDTLCWVGVEPTRMTRVEALDWDLTVSALSSLADVREITVVCKRLVKRKTINVKFELPDGDKT-YDIKTGSNLRGEMIRLDVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEIQEGAELLTPADREEDMLISKGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTE 344
            E ++ G+ ++  GLTLE +    K+    LD+G+ GL+++D +YG+EI K+++ R+  LG+ L E+  G DGRGLVLV  V   GNA  +GQ  VGD L WVG EP  MTRVE LD+D T++AL   AD   +T+V KRLV+R+ + V    PDG +   ++  GS LRGEM+R  + VYDP   R+DQPY TGNC GEG+CGTC V + EG ELL+  DR E M++ K   P R+RLSC+TIVG  N  G V +K++P  E
Sbjct:   54 EGAEDGVTRNADGLTLEEIAGLFKMSVFDLDEGLYGLDTRDVNYGIEIAKARVSREGGLGLGLSEMMAGRDGRGLVLVEDVAEGGNAATTGQFRVGDALSWVGEEPGDMTRVEGLDFDGTLAALGKYADREAVTLVAKRLVRRQPLEVTLIQPDGSEAKLEMLAGSVLRGEMLRQGLQVYDPSQKRFDQPYVTGNCGGEGLCGTCLVAVLEGKELLSLPDRVEAMVLEKR--PARYRLSCRTIVGVTNQPGKVVLKSMPTLE 313          
BLAST of mRNA_P-canaliculata_contig985.23960.1 vs. uniprot
Match: A0A4D9CWU2_9STRA (PDZ domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWU2_9STRA)

HSP 1 Score: 209 bits (533), Expect = 2.490e-62
Identity = 122/275 (44.36%), Postives = 159/275 (57.82%), Query Frame = 0
Query:   86 SDSGMAKSPAGLTLEGVYRKLKLETQGLDDGIVGLESKDTDYGVEIVKSKL-IRKPTLGIQLEEVARGGDGRGLVLVAGVEPRGNAEAS----GQIFVGDTLCWVGVEPTRMTRVEALDWDLTVSALSSLADVRE--ITVVCKRLVKRKTINVKFELPDGD-----------KTYDIKTGSNLRGEMIRLDVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEIQEGAELLTPADREEDMLISKGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQ 342
            S++  +  P  LTLE +  K+K E   LD G  GLESKD  Y VEI K  + + +  +G+ LEE+ RG DGRG VLV+ + P GNA  +    G+I VGD +C++G EP  M R E LD++ T+ AL    +     IT+V KRLV R +++V      G            +T  +  GS LR E++R  +PVY   TLR+DQPY TGNC GEGICGTC V++ EG ELL   D  E M+  K      WRLSC+ IVG  N  GTVR K +PQ
Sbjct:    4 SETTNSNVPPPLTLEEISNKIKFEITDLDAGAYGLESKDVAYAVEIAKVDIPLGEGGIGLGLEELRRGQDGRGCVLVSSLPPEGNAAQAAGDDGKIRVGDMICYLGQEPRGMVRTEGLDFEQTMGALRRFLETGAPAITLVLKRLVFRASLDVSLSYTPGPDEESQGRKAWTQTLPMLAGSQLRKELLRAGLPVYSQDTLRFDQPYVTGNCGGEGICGTCLVQVLEGKELLNEKDEVEAMVTRKWGAA-NWRLSCRVIVGATNTPGTVRFKLMPQ 277          
BLAST of mRNA_P-canaliculata_contig985.23960.1 vs. uniprot
Match: A0A7S2V297_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V297_9STRA)

HSP 1 Score: 199 bits (505), Expect = 3.120e-59
Identity = 109/206 (52.91%), Postives = 143/206 (69.42%), Query Frame = 0
Query:  156 RGLVLVAGVEPRGNAEASGQIFVGDTLCWVGVEPTRMTR----VEALDWDLTVS---ALSSLADVREITVVCKRLVKRKTINVKFELPDG-DKTYDIKTGSNLRGEMIRLDVP--VYDPKTLRYDQPYATGNCAGEGICGTCFVEIQEGAELLTPADREEDMLISKGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTEWREQRSK 351
            RGLVLV  + P GNA  S +I VGDTLC    +PT   R    +EA+D D T+    ALS  +  +++ ++ KRLVKR+ +NVK  LPDG +KT  + +GSNLRGEMIR  +P  +YDP+T RYDQP+ TGNC GEGICGTC +E+ +G E+L+ AD  E+ML+   N P+RWRLSC+T VG +N  G+V+V+AVPQ E RE R K
Sbjct:    1 RGLVLVKDLAPGGNAALSAKIRVGDTLCRAA-DPTVGARSVVSLEAVDLDGTLQNLGALSFASRQKQLVLIFKRLVKREMVNVKIALPDGGEKTLQMLSGSNLRGEMIRQGLPEYIYDPETKRYDQPFITGNCGGEGICGTCLIEVMDGPEMLSEADNLENMLLE--NQPIRWRLSCRTFVGPDNKSGSVKVRAVPQKEMRESRKK 203          
BLAST of mRNA_P-canaliculata_contig985.23960.1 vs. uniprot
Match: A0A7R9YBT6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBT6_9STRA)

HSP 1 Score: 189 bits (479), Expect = 7.640e-54
Identity = 105/255 (41.18%), Postives = 154/255 (60.39%), Query Frame = 0
Query:   97 LTLEGVYRKLKLETQGLDDGIVGLESKDTDYGVEIVKSKLIRKPTLGIQLEEVARGGD---GRGLVLVAGVEPRGNAEASG-QIFVGDTLCWVGVEPTRMTRVEALDWDLTVSALSSL-ADVREITVVCKRLVKRKTINVKFELPDGDKT-YDIKTGSNLRGEMIRLDVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEIQEGAELLTPADREEDMLISKGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTEW 345
            L++E +  +L ++   +DDG  GL  +D  YG+++VK+ + RKP+LGI L E+    D    R LVLV G+E  GNA A G  + VGD +  +          E  D+D  +  +  +     E+T+V  RLV+R  + + +ELP+GD++      GSNLRG  ++  V +YD +T R+D PYATG+CAGEG+CGTC V +  G +LL+PADR E  LI KG  P+ WR +C+  VG +N EGTV V+  PQ+ +
Sbjct:   58 LSVEDIADRLAIQVFDMDDGKFGLSCRDPAYGLKVVKTSVKRKPSLGIVLNEMVDASDPSADRALVLVGGLE--GNAAAEGVDLEVGDVITAIADGSGGYISTEGRDYDFLIDTIVGVDPGAEELTLVVNRLVERAMVTINYELPNGDRSSVQAPAGSNLRGIFLQEGVRLYDERTRRFDMPYATGDCAGEGLCGTCLVNVWSGEDLLSPADRNE-ALICKGR-PMGWRAACRVFVGADNQEGTVEVRLQPQSRF 308          
BLAST of mRNA_P-canaliculata_contig985.23960.1 vs. uniprot
Match: A0A7S3P6U2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P6U2_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.220e-49
Identity = 105/260 (40.38%), Postives = 156/260 (60.00%), Query Frame = 0
Query:  102 VYRKLKLETQGLDDGIVGLESKDTDYGVEIVKSKL---IRKPTLGIQLEEVARGGDGRGLVLVAGVEPRGNAEASGQIFVGDTLCWVGVEPTRMT-RVEALDWDLTVSALSSLADVRE--------ITVVCKRLVKRKTINVKFELPDGD-KTYDIKTGSNLRGEMIRLDVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEIQEGAELLTPADREEDMLISKGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTEWREQ 348
            + R+LKLE   L++GI G +S+D  YG+E++++++      P+LG+ L E+A   DGRGLVLV+ V        S  I VGD +  V      +  R   L++D TV A+    DV+E        + +   RLVKR TI V+   P  +  T +   G NLR  ++R D+ +Y+ KT R+D PYATG+CAGEG+CGTC V + EG +LL P D  E+ LI++G  PL WR SC+T+VG  N  GT++V+  PQ+++ ++
Sbjct:  125 IARRLKLEIFDLEEGIFGFDSQDPVYGLEVIQTEIPLSSENPSLGLVLTEMAGNKDGRGLVLVSEVTGNAKNARSSPILVGDVITGVRTSDGSLRERTTGLNYDRTVEAVG---DVKEAALKGDGTLHLELNRLVKRATIQVQVVQPGKNVTTIEALAGENLRRLLLRKDIRLYNRKTKRFDMPYATGDCAGEGLCGTCLVAVNEGMDLLNPKDGAEE-LITRGR-PLSWRASCRTVVGSNNEGGTIQVRVQPQSDFEDE 379          
BLAST of mRNA_P-canaliculata_contig985.23960.1 vs. uniprot
Match: B7G5I1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G5I1_PHATC)

HSP 1 Score: 165 bits (417), Expect = 9.700e-45
Identity = 105/257 (40.86%), Postives = 152/257 (59.14%), Query Frame = 0
Query:  104 RKLKLETQGLDDGIVGLESKDTDYGVEIVKSKL-IRKPTLGIQLEEVARGGDGRGLVLVAGVEPRGNA-EASGQ-IFVGDTLCWVGV-EPTRMTRVEALDWDLTVSALSSLADVRE---ITVVCKRLVKRKTINVKFELPDGD---KTYDIKTGSNLRGEMIRLDVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEIQEGAELLTPADREEDMLISKGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTEWREQRS 350
            +K KLE   LD+G+ G +SKD  YG+E+V + + +    LG+ L E+A   DGRGLV+V+ +   GNA +A+ Q I VGDT+  V   +     RV A ++D TV A+    +      IT+   RL+KR  + V+ E+ DG    +  +   G NLR   +R  + +YD +T R+DQP+ TGNC G+G+CGTC V + +G +LL P D  E + I+KG  P  WR SC+T VG  NV GT+R+   PQ+E  E+ S
Sbjct:   54 QKFKLEIFDLDEGLFGFDSKDNRYGLEVVHTNIDVGNDGLGLVLTEMAGSPDGRGLVMVSKIT--GNAAKANPQAIHVGDTITGVMANDGVLKERVTAFNYDKTVEAIGRAKESSTDGTITLELNRLIKR--LPVRVEIDDGSGHVQVIEALAGENLRRMFMRKQLKLYDERTRRFDQPFNTGNCGGDGVCGTCLVNVLQGMDLLNPKDSHE-VFITKGRPP-SWRASCRTTVGFNNVGGTLRISLHPQSELPEELS 304          
BLAST of mRNA_P-canaliculata_contig985.23960.1 vs. uniprot
Match: A0A383VEF3_TETOB (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VEF3_TETOB)

HSP 1 Score: 71.2 bits (173), Expect = 2.450e-11
Identity = 47/124 (37.90%), Postives = 64/124 (51.61%), Query Frame = 0
Query:  219 VCKRLVKRKTINVKFELPDGDKTYDIKTGSNLRGEMIRLDVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEIQEGAELLTPADREEDMLISKGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQ 342
            VC +     TI VKF + +G +   I+    + GE  +L   + D K   Y        C G G CGTC V++QEGAELL+     ED  ++K   P  WRL+C+TIVG     GTV ++  PQ
Sbjct:   33 VCVQASSEPTITVKF-VEEGQQPVTIEC---ISGEE-QLRAAMLDNKVDLYTTWGKLWQCGGGGQCGTCIVQVQEGAELLSERTATEDKKLNKK--PETWRLACQTIVGDGTNSGTVVIQTKPQ 149          
BLAST of mRNA_P-canaliculata_contig985.23960.1 vs. uniprot
Match: A0A7S0DWC5_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0DWC5_9CRYP)

HSP 1 Score: 67.4 bits (163), Expect = 7.530e-9
Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 0
Query:  236 PDGDK-TYDIKTGSNLRGEMIRLDVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEIQEGAELLTPADREEDMLISKGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQT 343
            PDG + TY+ + G+NLR  +I   V VY+    R+       NC G+ +CGTC V++ +GAE       +E+  + K  LP  +RLSC       NV G VRVK  P T
Sbjct:  248 PDGQEVTYEARAGANLRDSLIENGVQVYNVAQGRFT------NCNGKQLCGTCVVDVLQGAEYTNSKSIDEENFLRK--LPGSYRLSCCV-----NVYGNVRVKTRPPT 343          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig985.23960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNE9_ECTSI2.890e-13462.54Ferredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8L... [more]
A0A836CRA8_9STRA3.330e-7751.912Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S4DIM7_HETAK4.210e-7448.47Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A4D9CWU2_9STRA2.490e-6244.36PDZ domain-containing protein n=3 Tax=Monodopsidac... [more]
A0A7S2V297_9STRA3.120e-5952.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9YBT6_9STRA7.640e-5441.18Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3P6U2_9STRA1.220e-4940.38Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
B7G5I1_PHATC9.700e-4540.86Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A383VEF3_TETOB2.450e-1137.902Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S0DWC5_9CRYP7.530e-938.53Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 276..326
e-value: 4.4E-6
score: 26.6
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 224..351
e-value: 1.1E-15
score: 59.2
NoneNo IPR availablePANTHERPTHR23426FERREDOXIN/ADRENODOXINcoord: 221..346
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 131..188
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 238..332

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig985contigP-canaliculata_contig985:22848..27256 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig985.23960.1mRNA_P-canaliculata_contig985.23960.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig985 21312..27415 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig985.23960.1 ID=prot_P-canaliculata_contig985.23960.1|Name=mRNA_P-canaliculata_contig985.23960.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=353bp
MLQPSHPTGRTSASLSTWRQLIPLFLLGSLRGGSSFLSPFAPIARKASLL
RKTNAEASDVDSMTPAQEKAPSDSPPAGLAMEEEESDSGMAKSPAGLTLE
GVYRKLKLETQGLDDGIVGLESKDTDYGVEIVKSKLIRKPTLGIQLEEVA
RGGDGRGLVLVAGVEPRGNAEASGQIFVGDTLCWVGVEPTRMTRVEALDW
DLTVSALSSLADVREITVVCKRLVKRKTINVKFELPDGDKTYDIKTGSNL
RGEMIRLDVPVYDPKTLRYDQPYATGNCAGEGICGTCFVEIQEGAELLTP
ADREEDMLISKGNLPLRWRLSCKTIVGRENVEGTVRVKAVPQTEWREQRS
KK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
IPR036034PDZ_sf
IPR0360102Fe-2S_ferredoxin-like_sf