prot_P-canaliculata_contig9849.23955.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9849.23955.1
Unique Nameprot_P-canaliculata_contig9849.23955.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length34
Homology
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BLAST of mRNA_P-canaliculata_contig9849.23955.1 vs. uniprot
Match: A0A6H5J855_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J855_9PHAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.300e-8
Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = 0 
Query:    1 VIEEGKHDELLERKGAYANLMTTQVQSFSTIAN 33
            VIEEGKHDELLER+GAY NLM+TQV+SFSTI +
Sbjct:  181 VIEEGKHDELLEREGAYYNLMSTQVRSFSTIGD 213
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9849.23955.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5J855_9PHAE1.300e-881.82ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9849contigP-canaliculata_contig9849:11355..11456 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9849.23955.1mRNA_P-canaliculata_contig9849.23955.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9849 11355..11456 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9849.23955.1 ID=prot_P-canaliculata_contig9849.23955.1|Name=mRNA_P-canaliculata_contig9849.23955.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=34bp
VIEEGKHDELLERKGAYANLMTTQVQSFSTIAN*
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