mRNA_P-canaliculata_contig9847.23952.1 (mRNA) Pelvetia canaliculata dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-canaliculata_contig9847.23952.1
Unique NamemRNA_P-canaliculata_contig9847.23952.1
TypemRNA
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Homology
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: D7FQ79_ECTSI (Possible haloacid dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ79_ECTSI)

HSP 1 Score: 437 bits (1125), Expect = 3.430e-150
Identity = 210/276 (76.09%), Postives = 242/276 (87.68%), Query Frame = 1
Query:    1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGEDTDGFLEAMSLKYSSVREATFLLCHGPDTIVDDTGTTRTGTRNSGSLEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGVDAKAGRPPFELSPKTLDKLFVRENVTPTFTMPLFAL 828
            DG  ALPGAVECLEELR +GKRLV+LSNTSKRE FTM RLPKFGFRR+LFDGGVTSGEEGYQHL ++GLVGGKA+LLGWNGED+DG L A+SL YSS +EATFLLCHGPD IVDDTG TRT TRN+G +EPYEA+ + A++RD+PMYNVNPD +VNNPQGG W+MPG+++K+YE MGGRV YFGKPHKEH++ AV+KMGL  D VVHVGDSLAHDI GA++AGLDSVFIAGGI GEELG+DAKA +  F LSP  L++ F RENVTPT+TMPLFAL
Sbjct:   38 DGRDALPGAVECLEELRSQGKRLVILSNTSKREDFTMARLPKFGFRRELFDGGVTSGEEGYQHLVQNGLVGGKAVLLGWNGEDSDGLLAALSLDYSSPKEATFLLCHGPDNIVDDTGATRTDTRNTGKVEPYEAVFQAAIERDLPMYNVNPDITVNNPQGGLWHMPGLLAKRYEAMGGRVTYFGKPHKEHYDTAVEKMGLGNDRVVHVGDSLAHDIVGASSAGLDSVFIAGGICGEELGIDAKADKSTFNLSPDALERAFSRENVTPTWTMPLFAL 313          
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A8J9WZI5_PHATR (Hypothetical protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9WZI5_PHATR)

HSP 1 Score: 198 bits (503), Expect = 9.520e-57
Identity = 123/290 (42.41%), Postives = 161/290 (55.52%), Query Frame = 1
Query:    1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGEDTDGFLEAMSLKYSSV------REATFLLCHG--------PDTIVDDTGTTRTGTRNSGSLEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGVDAKAGRPPFELSPKTLDKLFVRENVTPTFTMPLFAL 828
            +GE  L GA EC+E L R+GK+L++LSN+S     T  RLPK GF RD F G VTSGEE   H  +    G K + L W    T   +  +  KY +V       EA F+L HG        PD    +T         +G+LE  + +L+  +DR IPM   NPDF    P G    MPG I+++YE++GG V  FGKPHKEHFEA V+ +GL K+ VVHVGDS+ HDI GA A G+ S+ + GG+  EELG++   G  P       L++LF     TPT  +PL  L
Sbjct:   14 NGEHGLEGAPECVEALARQGKKLIILSNSSSLAKDTSARLPKLGFDRDAFVGAVTSGEEA-SHYIQETYAGKKCLFLTWKSPKTPSPVSVLQ-KYGNVSISDNVEEADFILLHGCEVMRGPGPDGEASETDLGH--FMETGNLEIVDKILKPCLDRMIPMVCANPDFIYVKPDGDVASMPGKIAERYEQLGGSVTSFGKPHKEHFEACVRDLGLPKEKVVHVGDSIYHDIAGANATGISSILVVGGVHREELGIEV--GSLPER---DALEQLFHTHGETPTHVVPLLKL 294          
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A7S2V2E7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2E7_9STRA)

HSP 1 Score: 187 bits (476), Expect = 4.310e-53
Identity = 106/265 (40.00%), Postives = 158/265 (59.62%), Query Frame = 1
Query:   67 LVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNG-EDTDG-FLEAMSLKYSSVRE-ATFLLCHGPDTIVDDTGTTRTGTRNSGSLEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLEKDN---------VVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGV-DAKAGRPPFELSPKTLDKLFVRENVTPTFTMPLF 822
            +++LSN+SKR  FT+ RL KFGF    F G VTSGEE  Q++ R+GLVG KA++  W      D  F + +  +++S  E A ++LCHG   I    G T T  +  G ++ YE LL+ A ++ + M   NPDF+V  P G   YMPG+++++Y+E+GG +  FGKP   HF+A ++ +G ++D          ++HVGDSL HDI GAA AG+DS+FI GGI   +L + DA       E++P +L  L  +    P+++  LF
Sbjct:    1 MIILSNSSKRSNFTIDRLGKFGFDSSAFSGAVTSGEEALQYIQRNGLVGQKALVFSWEDFRQADAPFFDQVQPEFASPAEGARYILCHGSQVISTALGDTSTRLQQEGIVDDYEDLLKDAAEKGLLMVVANPDFTVKKPDGSTAYMPGLLARRYQELGGPLVTFGKPGVSHFQACIRMLGQQQDGEGQPILPDRIIHVGDSLHHDIQGAADAGIDSLFIGGGIHSADLQLSDAPHELSSAEINPSSLVTLCSKYTSEPSWSSTLF 265          
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A7S0EVJ0_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EVJ0_9CRYP)

HSP 1 Score: 186 bits (472), Expect = 3.410e-51
Identity = 109/282 (38.65%), Postives = 159/282 (56.38%), Query Frame = 1
Query:    1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGE--DTDGFLEAMSLKYSSVREATFLLCHGPDTIVDDTGTT--RTGTRNSGSLE-PYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLE--KDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGVDA-KAGRPPFELSPKTLDKLFVRENVTPTFTMPLF 822
            +G + LPGA+EC   L + GK++ +LSNTS+R     K+L   GF  +  +  +TSGEE ++H+  S + G   + L W  E  D D FL+ +++  S V  A F+LCHG + +V D  T+   T     G +   Y  LL+ A+ R + M   N D+S   P G   +MPG+I ++Y+ MGG+V +FGKPH EHF+A +K  G +     VVHVGDSL HDI GA  A +DSVFI GG+  +++G+     G    E   + +DKL   E   P + +  F
Sbjct:   96 NGAIPLPGALECFNALNKAGKKIAILSNTSRRSKDAFKKLRALGFELESEESVITSGEECWKHMKES-MDGKSCVYLTWKREIEDADKFLDGLNISTSDVSSADFILCHGSEIVVGDPSTSPGETDFIKHGDVSLSYNQLLKAALKRGLQMLVANADYSAVLPDGSLGHMPGLIGQQYQLMGGKVKWFGKPHPEHFQACLKTFGKDVLPTRVVHVGDSLDHDIQGAMDANIDSVFILGGVHAQDVGLRVGNDGSLSGETDEEKVDKLLTDEGYYPKWILEQF 376          
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A1Z5JT37_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JT37_FISSO)

HSP 1 Score: 182 bits (462), Expect = 1.650e-50
Identity = 113/276 (40.94%), Postives = 161/276 (58.33%), Query Frame = 1
Query:    1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGE-DTDGFLEAMSLKY-SSVREATFLLCHGPDTIVDDTGTTRTGTRNSGSLEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGVDAKAGRPPFELSPKTLDKLFVRENVTPTFTMPLF 822
            DG   L GA + +  L+ +GK+L++LSN+SK   FT+++LP+FG     F   VTSG+E   ++ R       A+ L W+ + D D FL+A  +   + V +A F+L HG   +   T         +G L   E LL+  V+  +PM   NPDF +    G   YMPG I+++YEE+GG+V  FGKP+KEHF+A ++++ L  + VVHVGDSL HDI GA AAGLDS+F+AGG+   EL  D   G  P   S ++  +LF R    PT  +PLF
Sbjct:   36 DGTKGLVGAADAVRSLKARGKKLIILSNSSKLTDFTLQKLPQFGLEPSDFVHAVTSGQEACAYV-RQHHFQQPALFLTWSSQSDADVFLQACGIPVVTRVEDAKFILLHGARRLYG-TDLDLEQCYMTGDLTVVEPLLKKCVEHQLPMICANPDFVMVRTDGRLVYMPGTIAQRYEELGGKVTSFGKPNKEHFQACLRELELPAEKVVHVGDSLHHDIMGANAAGLDSIFVAGGVHRHEL--DNLPGEVP---SRESCLELFERHGQFPTHVVPLF 304          
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A0G4G895_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G895_9ALVE)

HSP 1 Score: 187 bits (475), Expect = 1.950e-50
Identity = 105/240 (43.75%), Postives = 145/240 (60.42%), Query Frame = 1
Query:    1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGEDTDGFLEAMSLKYSSVREATFLLCHGPDTIVDDTGTTRTGT---RNSGSLEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEE 711
            +G   LPGA++CLE L++ GK++V+LSN+S++    +  L K GF  D+F G VTSGEE   +L R    G  A  + W G ++D F+EA  +K   + EA  L+  G + I + +    T     R +G L+ +   L+  V+R IP+   NPDF V  P G   +MPGVI+  YE++GG+V  FGKP K HFEA+V+ + L  + VVHVGDSL HDI GA  AGL S+FIA GI   E
Sbjct:   30 NGAYPLPGALDCLERLQKAGKKMVILSNSSRKAFDCINGLKKLGFDVDVFVGAVTSGEEASTYL-RDNFSGKIATWMRWEGRESDPFIEAAEVKIGPIEEAEVLVLQGVEIISEGSDRPLTSAPCFRRTGDLKDHMPFLKKGVERGIPLVCANPDFQVLEPSGSRAFMPGVIAAAYEKLGGKVLRFGKPGKTHFEASVRMLELPPERVVHVGDSLEHDIAGACGAGLASIFIAEGIHKHE 268          
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A7S0C8U6_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C8U6_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.790e-49
Identity = 109/295 (36.95%), Postives = 157/295 (53.22%), Query Frame = 1
Query:    1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGEDTDGFLEAMSLKYS----------SVREATFLLCHGPDTIVDDTGTTRTGTRNSGSLEPY---------EALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGVDAKAGRPPFELSPKTLDKLFVRENVTPTFTMPLFAL 828
            +G   LPGA EC+E+L  + K+ ++LSNTS     T+ +LPK GF    F+G VTSGEE   H++++     K +   W    T   L+ ++   S          S+ +A F++ HG   I    G+ + G     SL  +         + +L     R++PM   NPDF +  P G   +MPG I ++YE MGG+  YFGKPH  HFEA ++ +GL+++ V HVGDSL HD+ GA  +G+ S+F+ GGI  E+LG       P  E     L KLF +E  TPT  +PL  L
Sbjct:   35 NGSCGLPGAPECVEKLAAQNKKFIILSNTSSSSKATIAKLPKLGFDPINFEGAVTSGEEAGLHVSKA-YQSKKVLWFTWANGATPSPLDFLARCGSGDSRGIEVADSIEDADFIIAHGCGVI---RGSGKDGEAKETSLGSFHENGDFSVLDPVLEQCAKRNLPMVCANPDFIMVKPDGSKGHMPGKIGQRYESMGGKCEYFGKPHVPHFEACLRDLGLDRNRVAHVGDSLHHDVAGANNSGIASIFVTGGIHREDLGSPELGTLPTNE----ALQKLFKKEGQTPTHVIPLLRL 321          
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: L1JPQ0_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JPQ0_GUITC)

HSP 1 Score: 182 bits (461), Expect = 2.630e-48
Identity = 110/282 (39.01%), Postives = 165/282 (58.51%), Query Frame = 1
Query:    1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGE--DTDGFLEAMSLKYSSVREATFLLCHGPDTIVDDTGTT--RTGTRNSGS-LEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMG--LEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGVDA-KAGRPPFELSPKTLDKLFVRENVTPTFTMPLF 822
            +G + LPGA+EC E L++ GKR+ +LSNTS+R    +K+L   GF+ D  +  +TSGEE ++H+    + G   + L W  E  D D FL+ +++  S V  A F+LCHG + IV+++ ++   TG    G+ L  Y+ +L VA++R + M   N D+   N          +I ++Y+ MGG+V +FGKPH EHF+A +K  G  ++   VVHVGDSL HDI GAA A LDSVFI GG+  +E+G+   K G    E   + ++KL   E   P + +  F
Sbjct:   39 NGAIPLPGALECFESLKKAGKRIAILSNTSRRSKDALKKLRALGFQLDSEESVITSGEECWKHMNER-MNGKSCVYLTWKREVEDDDKFLDGLNISTSDVSTADFILCHGSEIIVENSSSSPVETGFIEHGNVLLAYQKVLAVALNRGLEMLVANADYRHANNSSNQ---TSLIGQQYQLMGGKVKWFGKPHSEHFQACLKTFGEDIKYTRVVHVGDSLDHDIQGAADANLDSVFILGGVHAQEVGLTTGKDGLTTGEQDEEKINKLLADEGCHPKWILEKF 316          
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A7S4N208_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N208_9STRA)

HSP 1 Score: 174 bits (442), Expect = 1.250e-47
Identity = 115/304 (37.83%), Postives = 164/304 (53.95%), Query Frame = 1
Query:   28 VECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGG------------KAMLLGWNGEDTDGFLEAMSL--------KYSSVREATFLLCHGPDTI----VD-DTGTTRTGT-RNSGSLEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEAAVKKMGLEKDN---VVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEEL-GVDAKAGRPPFELSP-------KTLDKLFVRENVTPTFTMPLFAL 828
            VEC+  L   GKRLV+LSNTS      +++L K GF    F+G VTSGEE  +H+  +   GG            KA    W+ ++ D     ++           SSV EA F+L HG   +    VD +   T  G+ + +G L   E  L+V ++RD+PM   NPDF V    G   +MPG I+++YEEMGG+V  FGKPH  HFEA ++++G  ++    VVHVGDSL HD+ GA AAG+D VF+ GGI  ++L G+     +   E++P       + L  LF RE + P   +P+F +
Sbjct:    1 VECVSYLASMGKRLVILSNTSSPADSALRKLSKMGFDPAHFEGAVTSGEEASRHVRETYGSGGGAEEKSKQRRNSKAFWFTWSADNPDATAHPLAFLGRCGHVTPASSVDEADFVLVHGTQVVRGPGVDGEASVTPLGSFKENGDLSLVEPYLQVCLNRDLPMVCCNPDFVVKLSSGDLAHMPGKIARRYEEMGGKVASFGKPHVSHFEACLRELGAAENGRSRVVHVGDSLHHDVAGANAAGIDCVFVTGGIHHDDLMGLGESMTKAEREMTPVGIMPEKEALAALFKREGIVPKLVVPMFQM 304          
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Match: A0A7S4D550_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D550_HETAK)

HSP 1 Score: 174 bits (442), Expect = 5.710e-47
Identity = 119/283 (42.05%), Postives = 162/283 (57.24%), Query Frame = 1
Query:    1 DGEVALPGAVECLEELRRKGKRLVVLSNTSKREAFTMKRLPKFGFRRDLFDGGVTSGEEGYQHL---ARSGL--VGGKAMLLGWNGEDTDGFLEAMSLKYSSVREATFLLCHGPDTIVDDTGTTRTGTRNSGSLEPYEALLRVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKPHKEHFEA---AVKKMGLEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGEELGVDAKAGRPPFELSPKTLDKLFVRENV-TPTFTMPLF 822
            +G  A  GA+E +E L ++GKRLV+LSN+SKR+   +K L K GF  D F G VTSG+  Y+ +   AR     +G + ++ G N +D   +L  M  + S++ EA FLL  G   I+D   TT+   R+  S     A+L  A  R +P+   NPD +   P  G   MPGVI K+YE+MGG VHY GKPH   +E    A+++ G  +D V  VGDSL HDI GA+ AG++S+FI GGI  EELG+       P   S K L+KL+ R     PT +MP F
Sbjct:   85 NGTHAYQGAIEAVERLAQRGKRLVILSNSSKRKKTGVKNLRKMGFNPDHFCGFVTSGDTVYEEMISRAREPFKSLGTRCVVFG-NADDDKAYLSEMQCELSTIEEADFLLARGNFVILDAVETTKCD-RSLESEARVAAVLAAAAARGLPLLVANPDIA--RPGCGS-PMPGVIGKQYEDMGGTVHYTGKPHSSVYELCFQALEEDGGNRDRVCAVGDSLDHDILGASRAGIESIFIIGGIHSEELGIKEGGRECP---SQKALEKLYARHGGGVPTHSMPAF 359          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9847.23952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ79_ECTSI3.430e-15076.09Possible haloacid dehalogenase-like hydrolase fami... [more]
A0A8J9WZI5_PHATR9.520e-5742.41Hypothetical protein n=2 Tax=Phaeodactylum tricorn... [more]
A0A7S2V2E7_9STRA4.310e-5340.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0EVJ0_9CRYP3.410e-5138.65Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A1Z5JT37_FISSO1.650e-5040.94Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A0G4G895_9ALVE1.950e-5043.75Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
A0A7S0C8U6_9STRA1.790e-4936.95Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
L1JPQ0_GUITC2.630e-4839.01Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S4N208_9STRA1.250e-4737.83Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S4D550_HETAK5.710e-4742.05Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9847contigP-canaliculata_contig9847:899..3829 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score386.0
Seed ortholog evalue1.3e-104
Seed eggNOG ortholog2880.D7FQ79
EggNOG free text desc.Haloacid dehalogenase-like hydrolase
EggNOG OGs2QU6A@2759,COG0647@1
Ec32 ortholog descriptionpossible haloacid dehalogenase-like hydrolase family protein
Ec32 orthologEc-01_007130.1
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size1302
Cds size723
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9847.23952.1prot_P-canaliculata_contig9847.23952.1Pelvetia canaliculata dioeciouspolypeptideP-canaliculata_contig9847 1007..3358 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817345.8354566-UTR-P-canaliculata_contig9847:898..10061622817345.8354566-UTR-P-canaliculata_contig9847:898..1006Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9847 899..1006 +
1693495237.0797737-UTR-P-canaliculata_contig9847:898..10061693495237.0797737-UTR-P-canaliculata_contig9847:898..1006Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9847 899..1006 +
1622817345.9224026-UTR-P-canaliculata_contig9847:3358..38291622817345.9224026-UTR-P-canaliculata_contig9847:3358..3829Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9847 3359..3829 +
1693495237.171438-UTR-P-canaliculata_contig9847:3358..38291693495237.171438-UTR-P-canaliculata_contig9847:3358..3829Pelvetia canaliculata dioeciousUTRP-canaliculata_contig9847 3359..3829 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817345.8488307-CDS-P-canaliculata_contig9847:1006..10721622817345.8488307-CDS-P-canaliculata_contig9847:1006..1072Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9847 1007..1072 +
1693495237.0961041-CDS-P-canaliculata_contig9847:1006..10721693495237.0961041-CDS-P-canaliculata_contig9847:1006..1072Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9847 1007..1072 +
1622817345.8612306-CDS-P-canaliculata_contig9847:1475..15681622817345.8612306-CDS-P-canaliculata_contig9847:1475..1568Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9847 1476..1568 +
1693495237.1072183-CDS-P-canaliculata_contig9847:1475..15681693495237.1072183-CDS-P-canaliculata_contig9847:1475..1568Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9847 1476..1568 +
1622817345.8720653-CDS-P-canaliculata_contig9847:1798..19421622817345.8720653-CDS-P-canaliculata_contig9847:1798..1942Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9847 1799..1942 +
1693495237.11997-CDS-P-canaliculata_contig9847:1798..19421693495237.11997-CDS-P-canaliculata_contig9847:1798..1942Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9847 1799..1942 +
1622817345.8837028-CDS-P-canaliculata_contig9847:2234..23871622817345.8837028-CDS-P-canaliculata_contig9847:2234..2387Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9847 2235..2387 +
1693495237.136096-CDS-P-canaliculata_contig9847:2234..23871693495237.136096-CDS-P-canaliculata_contig9847:2234..2387Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9847 2235..2387 +
1622817345.8997664-CDS-P-canaliculata_contig9847:2732..27891622817345.8997664-CDS-P-canaliculata_contig9847:2732..2789Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9847 2733..2789 +
1693495237.1472101-CDS-P-canaliculata_contig9847:2732..27891693495237.1472101-CDS-P-canaliculata_contig9847:2732..2789Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9847 2733..2789 +
1622817345.9113858-CDS-P-canaliculata_contig9847:3148..33581622817345.9113858-CDS-P-canaliculata_contig9847:3148..3358Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9847 3149..3358 +
1693495237.1575394-CDS-P-canaliculata_contig9847:3148..33581693495237.1575394-CDS-P-canaliculata_contig9847:3148..3358Pelvetia canaliculata dioeciousCDSP-canaliculata_contig9847 3149..3358 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-canaliculata_contig9847.23952.1

>prot_P-canaliculata_contig9847.23952.1 ID=prot_P-canaliculata_contig9847.23952.1|Name=mRNA_P-canaliculata_contig9847.23952.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=241bp
MKRLPKFGFRRDLFDGGVTSGEEGYQHLARSGLVGGKAMLLGWNGEDTDG
FLEAMSLKYSSVREATFLLCHGPDTIVDDTGTTRTGTRNSGSLEPYEALL
RVAVDRDIPMYNVNPDFSVNNPQGGHWYMPGVISKKYEEMGGRVHYFGKP
HKEHFEAAVKKMGLEKDNVVHVGDSLAHDIYGAAAAGLDSVFIAGGISGE
ELGVDAKAGRPPFELSPKTLDKLFVRENVTPTFTMPLFAL*
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mRNA from alignment at P-canaliculata_contig9847:899..3829+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-canaliculata_contig9847.23952.1 ID=mRNA_P-canaliculata_contig9847.23952.1|Name=mRNA_P-canaliculata_contig9847.23952.1|organism=Pelvetia canaliculata dioecious|type=mRNA|length=2931bp|location=Sequence derived from alignment at P-canaliculata_contig9847:899..3829+ (Pelvetia canaliculata dioecious)
GACGGGGAAGTTGCCTTACCTGGTGCCGTGGAGTGCCTGGAAGAGCTTCG AAGAAAAGGGAAGCGCTTGGTTGTCCTAAGCAACACGTCCAAGAGAGAGG CTTTCACGATGAAGAGACTCCCCAAGTTTGGGTTTCGAAGGGATTTGTTC GACGGTGGCGTAACCTCTGGAGAGGTGGGTACGCGCGCGAAATGGGCTAC ATATAGTTCGATGAAATGGTTAGACCTTGAGATTTTTTTTGAAATGAAAA CCGGCGAATCTTCTTGGCTTGCACGCCGCGCAAATCGGGTGACTGTATGC ATTCCGCCTTGGACACAAAAGTGCACCATAGATCGTATTGACCTCGAGGC AGCCGCGGACGGCGGATAGCCCAACACCGGTACTAACATACAATGAGAAA TCTAACGTTCAGAACGCTGGCAGTACTCTACCGATGACTGTCAGGTAGGA CGTCGAACGGCTCCTCTTGGCGATGCCTAGCGGCGCCCTCAGTGAATATT ATTTGGATACATTTAACAAATGCTGTCATATGGTCTTCCAACTCTTCCTT CTCATTTCCCTCTTTTTGTGTGAGCAGGAGGGCTATCAACATCTAGCGAG AAGTGGGCTAGTTGGAGGGAAGGCTATGCTACTAGGGTGGAACGGCGAAG ACACGGATGGTTTTTTGGAGGTGTGAAAGCGACTCTCCGGGGTAGCCGTC GCGACTCGGAACAGAACAGTACTATATACATAGGAGATGTTTTACCCTTA ACCATCATCCCTCCGTTTAGGGACTATGTCCGTGCAGACTGAGGTGCGAG GAGCTGTGGTCGTATTCGAGAAGGTAATCCGTCCAACGTACTCAATGTGA TAGTTTATCATCCCCCCTGATGAAGCGCCTTTCCGATATCTGTTTGGCAG GCGATGTCTCTTAAGTACTCCTCGGTCAGGGAGGCGACTTTCTTGCTCTG CCACGGGCCTGACACAATCGTGGACGATACCGGCACGACGCGAACTGGGA CGCGTAATTCAGGCAGCTTAGAGCCCTACGAAGCTCTACTTAGGGTAGGA ACATTTTAGAGCTAAACCTCACGCTACGATGCCGCGTAAGTCAGGCAGCT TAGTGCCCTACGAACCTCTGTTTCTTGTTAAAATATGTGGGAGCAACTGC CCACTTTATGCTAAGCGCTATTTCAGAGATAAAACTTCACGCTCCGATGT TATACGTGTTTGATTGCTTCAACCTTTATGAGATAGGACCACGATCCGAG GGAAGAAAAGTCTAAAGCATGCCGGAAACGCGAACTACTTTTTTTCTTGT TGGGTGCGGGGGGGTGGGGGGGGGGGCTGCTGCCAGGTAGCGGTGGATCG AGATATACCAATGTACAACGTGAACCCCGACTTCAGCGTGAACAACCCGC AAGGAGGTCATTGGTACATGCCTGGAGTTATCTCTAAGAAGTACGAAGAA ATGGGTGGACGAGTTCACTACTTTGGGAAGCCGCACAAGGTGTTCGCTAA TTACGACGTGAAAAGTGACGTTTGGAATTTTGTAACGAAGTCACGGTTAC CATTTGCGTGTACCTGCCAAAAGAATTCTAAGCATGACGCGGGTGGAGAC TTGTTGCGACTGACGCATTTAACTAAAGGCGTGGCGATCGCGCTACTTGG TTGAATCGTGCCTATTTATTTGAATCAAGCTCGAGTTGAACGTCGCAGCT TCGCACACGTTCTTTCCGCTATCTAAGGCATCGATGCTTGAACCACGCCC TCAATACCCACATGGCTCTACTCTAACCTTACCTGTACGCGTGATTGACG CGGTCTATTTTGCGCAACGTTTTCGCCTGGTCAGGAGCACTTCGAAGCAG CAGTGAAAAAGATGGGTCTGGAGAAGGATAATGTCGTGCACGTGAGTCAC AACTAACGGTATCTACTGTCATCGTGACCGGAGGCCTTGAACGTCACAAC CTTTTCTGATTCAGAAGTTGGTTTCGAAGGAGAAAATATGGATTCCTCCT CTGAGGGGATGCCGAGAAGATCCGAGTTTGTCGCCTAGAGTTTATGAAGC ACGCAAATGCAGTCGGCGGATGCCCCTTTGCGAGTTTTTTCGATTGGAAA GCGAAAATGTTACTCCGCAAAAACTGTCGAGCCTAGCAGTGGTGCTGTGG CGCTTCTGGAAGTAACCATTTCGTTGCCCATGTCACGACTATGCTTAGCA ACCTGCAAGTCTTTGGCTTACCGATTGAATATGCTGTGCCGATGCTCCAG GTAGGAGACAGTCTAGCACACGATATCTACGGAGCGGCGGCCGCGGGCTT GGATTCTGTGTTTATCGCTGGTGGTATCAGCGGCGAGGAACTAGGGGTTG ACGCGAAGGCAGGGAGGCCGCCGTTCGAACTGTCACCCAAGACTCTTGAC AAGCTGTTCGTGCGGGAGAATGTGACCCCTACTTTTACGATGCCGTTGTT TGCTCTCTGATACGATTGTGTTGCTATCAAACGTCTGGCCGCCGTGCAAT GCTCTGCGTGTCCACGTTTGGGAAAAACTATTTTTGGGATTTCAGCTTGA CTATTCGTAGCTTTATTTCTTTTAGAGGAACACGAATAATCAGTAGTAAA GTAGAAATATCAACACATTTTCTTTTTGGCCGCCCCGAAATCGCATCGCA CCAACAACCGCGAATCGAAGATTTTTGTCCATGGACCATATGCTTGATCG TGTACGAAGTATTCATCCATTCTTGTTGCTTGTATCTCACTTACGGCGGA TGGGCCACCAATCCCACCTACTCTTAGAGCTATACAATTTTGCGTTCCTG CTTGTGGTTACTTAGAATCTTCATTGATTGATTGACTTTTTTCTATTGAA TTCTCACATAAGCTGATGTCAAAAATCCAGCTCGTGGTCACAAGGTAGAA GAACACCATCCGAAAGGAAAATTCGTAGGAC
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Coding sequence (CDS) from alignment at P-canaliculata_contig9847:899..3829+

>mRNA_P-canaliculata_contig9847.23952.1 ID=mRNA_P-canaliculata_contig9847.23952.1|Name=mRNA_P-canaliculata_contig9847.23952.1|organism=Pelvetia canaliculata dioecious|type=CDS|length=1446bp|location=Sequence derived from alignment at P-canaliculata_contig9847:899..3829+ (Pelvetia canaliculata dioecious)
ATGAAGAGACTCCCCAAGTTTGGGTTTCGAAGGGATTTGTTCGACGGTGG
CGTAACCTCTGGAGAGATGAAGAGACTCCCCAAGTTTGGGTTTCGAAGGG
ATTTGTTCGACGGTGGCGTAACCTCTGGAGAGGAGGGCTATCAACATCTA
GCGAGAAGTGGGCTAGTTGGAGGGAAGGCTATGCTACTAGGGTGGAACGG
CGAAGACACGGATGGTTTTTTGGAGGAGGGCTATCAACATCTAGCGAGAA
GTGGGCTAGTTGGAGGGAAGGCTATGCTACTAGGGTGGAACGGCGAAGAC
ACGGATGGTTTTTTGGAGGCGATGTCTCTTAAGTACTCCTCGGTCAGGGA
GGCGACTTTCTTGCTCTGCCACGGGCCTGACACAATCGTGGACGATACCG
GCACGACGCGAACTGGGACGCGTAATTCAGGCAGCTTAGAGCCCTACGAA
GCTCTACTTAGGGCGATGTCTCTTAAGTACTCCTCGGTCAGGGAGGCGAC
TTTCTTGCTCTGCCACGGGCCTGACACAATCGTGGACGATACCGGCACGA
CGCGAACTGGGACGCGTAATTCAGGCAGCTTAGAGCCCTACGAAGCTCTA
CTTAGGGTAGCGGTGGATCGAGATATACCAATGTACAACGTGAACCCCGA
CTTCAGCGTGAACAACCCGCAAGGAGGTCATTGGTACATGCCTGGAGTTA
TCTCTAAGAAGTACGAAGAAATGGGTGGACGAGTTCACTACTTTGGGAAG
CCGCACAAGGTAGCGGTGGATCGAGATATACCAATGTACAACGTGAACCC
CGACTTCAGCGTGAACAACCCGCAAGGAGGTCATTGGTACATGCCTGGAG
TTATCTCTAAGAAGTACGAAGAAATGGGTGGACGAGTTCACTACTTTGGG
AAGCCGCACAAGGAGCACTTCGAAGCAGCAGTGAAAAAGATGGGTCTGGA
GAAGGATAATGTCGTGCACGAGCACTTCGAAGCAGCAGTGAAAAAGATGG
GTCTGGAGAAGGATAATGTCGTGCACGTAGGAGACAGTCTAGCACACGAT
ATCTACGGAGCGGCGGCCGCGGGCTTGGATTCTGTGTTTATCGCTGGTGG
TATCAGCGGCGAGGAACTAGGGGTTGACGCGAAGGCAGGGAGGCCGCCGT
TCGAACTGTCACCCAAGACTCTTGACAAGCTGTTCGTGCGGGAGAATGTG
ACCCCTACTTTTACGATGCCGTTGTTTGCTCTCTGAGTAGGAGACAGTCT
AGCACACGATATCTACGGAGCGGCGGCCGCGGGCTTGGATTCTGTGTTTA
TCGCTGGTGGTATCAGCGGCGAGGAACTAGGGGTTGACGCGAAGGCAGGG
AGGCCGCCGTTCGAACTGTCACCCAAGACTCTTGACAAGCTGTTCGTGCG
GGAGAATGTGACCCCTACTTTTACGATGCCGTTGTTTGCTCTCTGA
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