prot_P-canaliculata_contig98431.23946.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig98431.23946.1
Unique Nameprot_P-canaliculata_contig98431.23946.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length140
Homology
BLAST of mRNA_P-canaliculata_contig98431.23946.1 vs. uniprot
Match: A0A3M1MB92_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1MB92_9BACT)

HSP 1 Score: 55.8 bits (133), Expect = 5.710e-7
Identity = 50/148 (33.78%), Postives = 76/148 (51.35%), Query Frame = 0
Query:    3 ICGCFGSAGQT-PVNGTLTTGGQPIENVLVTFHPVADPDAKKLIASGVTNADGEFTLKGD-DGDKA-----KLSVGNYLVT---LTEGPVPDSIVASKDPLAAQTYALSLAHRPL-PVVYARHVDTPLKVEVFALGTEGKNEYALEME 139
            + GC GS+  T PV G +   GQP+E V V F+PV   DA    ASGVT+A+G+FTL  + +GD A     K+++  YLV    L E   PD   +      +   +   A++PL   +Y+    + L  EV     +G+N +  E++
Sbjct:   19 LAGCGGSSLPTVPVTGKVLVDGQPMEGVSVVFNPV---DASGRAASGVTDAEGKFTLTTEVNGDGALPGSYKVAISKYLVADDNLPEEVNPDDEASMDAIYGSLDTSKEQANKPLIDPMYSDPNGSGLTAEV---KKDGENYFEFEVK 160          
BLAST of mRNA_P-canaliculata_contig98431.23946.1 vs. uniprot
Match: UPI001E5C538D (hypothetical protein n=1 Tax=unclassified Blastopirellula TaxID=2647022 RepID=UPI001E5C538D)

HSP 1 Score: 52.0 bits (123), Expect = 1.210e-5
Identity = 43/129 (33.33%), Postives = 65/129 (50.39%), Query Frame = 0
Query:    1 LLICGCFGSAGQTPVNGTLTTGGQPIENVLVTFHPVADPDAKKLIASGVTNADGEFTLKG-DDGDKAKLSVGNYLVTLTEGPVPDSIVASKDPLAAQTYALSLAHRPLPVVYARHVDTPLKVEVFALGT 128
            L+ CG  G A   PV+GT+T GG+P  N++V+F P          + GVT+A G++TL+  DD  +    +G + V +    V     +  DP AAQ   L L         A+ +D  +++EV A GT
Sbjct:   23 LVGCGARG-APTAPVSGTVTVGGKPQANLVVSFMPQTGKLEAGKGSMGVTDAAGKYTLRTTDDEPRDGALIGKHKVVIR---VRMEERSEDDPAAAQKPPLQLP--------AKAIDGSMEIEVTADGT 139          
BLAST of mRNA_P-canaliculata_contig98431.23946.1 vs. uniprot
Match: A0A2Z3HDB3_9BACT (Uncharacterized protein n=1 Tax=Gemmata obscuriglobus TaxID=114 RepID=A0A2Z3HDB3_9BACT)

HSP 1 Score: 51.6 bits (122), Expect = 1.670e-5
Identity = 27/79 (34.18%), Postives = 41/79 (51.90%), Query Frame = 0
Query:    1 LLICGCFGSAGQTPVNGTLTTGGQPIENVLVTFHPVADPDAKKLIASGVTNADGEFTLKGDDGDKAKLSVGNYLVTLTE 79
            L +CGC G      V G +T GG+P++NV V + P    D     ++ VT+  G +TLK +DG       G++ V L +
Sbjct:   15 LFLCGCGGGPQFAEVEGAVTQGGKPLKNVRVEYWP----DGNGPKSTAVTDEQGHYTLKSEDGKTPGAVTGSHKVVLKD 89          
BLAST of mRNA_P-canaliculata_contig98431.23946.1 vs. uniprot
Match: A0A6P2DLG7_9BACT (Uncharacterized protein n=1 Tax=Gemmata massiliana TaxID=1210884 RepID=A0A6P2DLG7_9BACT)

HSP 1 Score: 50.4 bits (119), Expect = 4.520e-5
Identity = 28/79 (35.44%), Postives = 39/79 (49.37%), Query Frame = 0
Query:    1 LLICGCFGSAGQTPVNGTLTTGGQPIENVLVTFHPVADPDAKKLIASGVTNADGEFTLKGDDGDKAKLSVGNYLVTLTE 79
            L   GC G        GT+T GG P++NV V F P  D       ++GVT+  G +TLK +DG      VG + + L +
Sbjct:   15 LFASGCGGGPQFAEAEGTVTKGGAPLKNVRVEFWPQTDGPK----STGVTDEQGHYTLKSEDGRTVGAVVGAHTIVLKD 89          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98431.23946.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A3M1MB92_9BACT5.710e-733.78Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
UPI001E5C538D1.210e-533.33hypothetical protein n=1 Tax=unclassified Blastopi... [more]
A0A2Z3HDB3_9BACT1.670e-534.18Uncharacterized protein n=1 Tax=Gemmata obscuriglo... [more]
A0A6P2DLG7_9BACT4.520e-535.44Uncharacterized protein n=1 Tax=Gemmata massiliana... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig98431contigP-canaliculata_contig98431:432..851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig98431.23946.1mRNA_P-canaliculata_contig98431.23946.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig98431 432..851 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig98431.23946.1 ID=prot_P-canaliculata_contig98431.23946.1|Name=mRNA_P-canaliculata_contig98431.23946.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=140bp
LLICGCFGSAGQTPVNGTLTTGGQPIENVLVTFHPVADPDAKKLIASGVT
NADGEFTLKGDDGDKAKLSVGNYLVTLTEGPVPDSIVASKDPLAAQTYAL
SLAHRPLPVVYARHVDTPLKVEVFALGTEGKNEYALEME*
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