prot_P-canaliculata_contig98178.23917.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig98178.23917.1
Unique Nameprot_P-canaliculata_contig98178.23917.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length355
Homology
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BLAST of mRNA_P-canaliculata_contig98178.23917.1 vs. uniprot
Match: S0A401_9CAUD (Structural protein n=1 Tax=Cellulophaga phage phi14:2 TaxID=1327990 RepID=S0A401_9CAUD)

HSP 1 Score: 70.1 bits (170), Expect = 1.300e-9
Identity = 93/294 (31.63%), Postives = 126/294 (42.86%), Query Frame = 0 
Query:   85 MDTKEELLDRLAKAQEFTKMKAGLHSNSQEVPDMMDGEIPEGMGEFAEGGPIDVSGIASTGLGFVNDLTQNYDNVEGLEDMAKT-----DKVKSSGLSALKGASAGLALGPIGA---VAGGLIGGASGLLAANKKNNAIEEAKQNDVLKSANYYNNDFKFGGSILEDLTPRTPDAT-----------FAPITK--LNPKKPTNFQRGVANVKDALGTAGSFAKENYGSALSYAPILGNALQASKLKPNNTDRGTRLDNTYTPRLFDRESLYNKINN--NNVNSALTESSGGDLG 355
            M+TKEELL RLA AQEF K ++ +  N      M  GE   GMG+         S IA  G+   N       N  G   +  +     DK K   L A K     L  G IGA   + G +IG         K N  I +A  N+ LK  + Y+++F  GG  ++D+   T +A+           F PI+K       P   Q G+    + L        ENYG AL YAP   NA Q S+L+    +   RL N Y   L D  +L N +    +N  +A+T +S G  G
Sbjct:    1 METKEELLTRLANAQEFLKAQSAVGENDINQA-MFGGEQGIGMGDPN-------SMIAQQGMNLANGALDGAINAFGKTGIDTSGSQVYDKQKVDWLGAGKN----LLSGDIGAGFKLVGDIIG-------TGKANKDIAQANTNNALKVNSQYSSNFA-GGGFMDDIFKVTDEASDKLNDVGQTDIFNPISKPTYGGATPDVEQSGLDKRWNWLKEG---VNENYGDALRYAPAAMNAYQLSQLEKPEFESLDRLGNRYEKDLVDESALRNSVQQEADNTRNAVTNASAGSAG 271
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98178.23917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
S0A401_9CAUD1.300e-931.63Structural protein n=1 Tax=Cellulophaga phage phi1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig98178contigP-canaliculata_contig98178:1..1065 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig98178.23917.1mRNA_P-canaliculata_contig98178.23917.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig98178 1..1065 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig98178.23917.1 ID=prot_P-canaliculata_contig98178.23917.1|Name=mRNA_P-canaliculata_contig98178.23917.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=355bp
FNSFDAGGLHENNPFGGIPQGNGNTVEEGETSANIKGDKFIFSDRVDSNL
SKEFNLPSYVKNKSFSDASKSIEKKFKDREDKASMDTKEELLDRLAKAQE
FTKMKAGLHSNSQEVPDMMDGEIPEGMGEFAEGGPIDVSGIASTGLGFVN
DLTQNYDNVEGLEDMAKTDKVKSSGLSALKGASAGLALGPIGAVAGGLIG
GASGLLAANKKNNAIEEAKQNDVLKSANYYNNDFKFGGSILEDLTPRTPD
ATFAPITKLNPKKPTNFQRGVANVKDALGTAGSFAKENYGSALSYAPILG
NALQASKLKPNNTDRGTRLDNTYTPRLFDRESLYNKINNNNVNSALTESS
GGDLG
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