prot_P-canaliculata_contig9816.23915.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9816.23915.1
Unique Nameprot_P-canaliculata_contig9816.23915.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length435
Homology
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BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: D7FZX3_ECTSI (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX3_ECTSI)

HSP 1 Score: 821 bits (2120), Expect = 2.130e-298
Identity = 399/434 (91.94%), Postives = 413/434 (95.16%), Query Frame = 0 
Query:    1 MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTYGRS 434
            MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQ   KGF+GKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCP+TVTNVETVAVAPTILRRGASWFA FGRKNNHGTKLFAISGHVNNP+VVEEEMSIT+RELL+KHCGGVRGGWDNLQ VIPGGSSVPVLDI+DCADVMMDFDDLK+AGS LGTAAV VMDKSVDMIAAIRRLAHFYKHESCGQCTPCR       EGTGWLEQML+KMEKGEADTREIPMLEEI+R+IEGHTICALGDAAAWPVQGLIRRFQPVIE+RIAGGPEQY+SEK KYFQ+AWSGEPF NK WV Q GDG+ Y RS
Sbjct:   88 MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQ---KGFLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPTTVTNVETVAVAPTILRRGASWFASFGRKNNHGTKLFAISGHVNNPIVVEEEMSITLRELLDKHCGGVRGGWDNLQAVIPGGSSVPVLDINDCADVMMDFDDLKKAGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCR-------EGTGWLEQMLVKMEKGEADTREIPMLEEISRSIEGHTICALGDAAAWPVQGLIRRFQPVIEERIAGGPEQYQSEKGKYFQEAWSGEPFKNKAWVDQHGDGKAYSRS 511
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BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A835ZC73_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC73_9STRA)

HSP 1 Score: 737 bits (1903), Expect = 1.740e-265
Identity = 359/431 (83.29%), Postives = 382/431 (88.63%), Query Frame = 0 
Query:    1 MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTY 431
            MW GPDWIV EMK SGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY A   G +G NACGSGYDFD+YLHRGAGAYICGEETALIESLEGRQGKPR+KPPFPANVGVFGCP+TVTNVET+AVAPTILRRG +WFAGFGRKNN GTKLFAISGHVN+P VVEEEMSI +++LLE+HCGGVRGGWD LQ VIPGGSSVPVLDI+DC DV+MDFDDLK  GS LGTAAV VMDKSVDMIAAIRRLAHFYKHESCGQCTPCR       EGT WLEQ+L++ME GEAD REIPMLEEITR IEGHTICALGDAAAWPVQGLIRRFQ V+EDRI         +  +YFQ AWSG+PF N +W K  GDG+TY
Sbjct:   80 MWQGPDWIVNEMKASGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYLA---GKLGANACGSGYDFDIYLHRGAGAYICGEETALIESLEGRQGKPRMKPPFPANVGVFGCPTTVTNVETIAVAPTILRRGGAWFAGFGRKNNAGTKLFAISGHVNSPKVVEEEMSIPLKDLLERHCGGVRGGWDQLQAVIPGGSSVPVLDINDCKDVLMDFDDLKSRGSGLGTAAVTVMDKSVDMIAAIRRLAHFYKHESCGQCTPCR-------EGTNWLEQLLVRMESGEADKREIPMLEEITRQIEGHTICALGDAAAWPVQGLIRRFQHVVEDRIDNADT---FDPAQYFQHAWSGQPFTNADWTKAHGDGKTY 497
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BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A7S3MFV3_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFV3_9STRA)

HSP 1 Score: 727 bits (1876), Expect = 2.700e-261
Identity = 355/431 (82.37%), Postives = 385/431 (89.33%), Query Frame = 0 
Query:    1 MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTY 431
            M  GPDWIV E+K SGLRGRGGAGFPSGLKWSFMPK +DGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAG+AMRARA YIYIRGEYFNEAVV+ EAIHEAY A   GF+GKNACGSGYD+D+YLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPAN+G+FGCP+TVTNVETVAV+PTI RRGASWFAG GR NN GTKLF ISGHVNNP+VVEEEMSIT+RELLE+HCGGVRGGW NLQ VIPGGSSVPVLD +DC +VMMDFDDLK AGSALGTAAV VMDKSVDMIAAIRRL+HFY HESCGQCTPCR       EGTGW+E +L KME G+AD REIPMLEEI+RAIEGHTICALGDAAAWPVQGLIRRF+ V+EDRI   PE+Y +EK+KYFQ+AWSGE F N +W  Q GDG+ +
Sbjct:   85 MNQGPDWIVNELKASGLRGRGGAGFPSGLKWSFMPKKSDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGFAMRARAGYIYIRGEYFNEAVVLQEAIHEAYAA---GFLGKNACGSGYDYDLYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANIGLFGCPTTVTNVETVAVSPTIFRRGASWFAGMGRPNNTGTKLFGISGHVNNPIVVEEEMSITLRELLERHCGGVRGGWSNLQAVIPGGSSVPVLDENDCQNVMMDFDDLKAAGSALGTAAVTVMDKSVDMIAAIRRLSHFYTHESCGQCTPCR-------EGTGWMETILNKMEHGDADLREIPMLEEISRAIEGHTICALGDAAAWPVQGLIRRFKYVMEDRI-NHPEKYAAEKDKYFQRAWSGEQFKNLKWADQHGDGKNF 504
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BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A7S1TYU1_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYU1_9STRA)

HSP 1 Score: 723 bits (1865), Expect = 4.720e-260
Identity = 357/429 (83.22%), Postives = 380/429 (88.58%), Query Frame = 0 
Query:    3 MGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTY 431
            MGPDWIVQE+KDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLVVNADESEPGTCKDREIMRKDPHKL+EGCL+AGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY    KG IG+NACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRG+SWFAGFGRK N GTKLF ISGHVNNP VVEEEMSI +RELLE+HCGGVRGGW NLQ VIPGGSSVPVLD +DC  VMMDFDDLK  GS LGTAAV VMDKSVDM+AAIRRLAHFYKHESCGQCTPCR       EGTGWLE++L++ME G AD  EI MLEEI+R IEGHTICALGDAAAWPVQGLIRRFQ VIEDRI   PE + ++   +FQ+AWSGEPF N EW    G G+T+
Sbjct:   65 MGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKASDGRPSFLVVNADESEPGTCKDREIMRKDPHKLIEGCLIAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYA---KGMIGENACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGSSWFAGFGRKGNSGTKLFGISGHVNNPKVVEEEMSIDLRELLERHCGGVRGGWSNLQAVIPGGSSVPVLDENDCQSVMMDFDDLKAKGSGLGTAAVTVMDKSVDMVAAIRRLAHFYKHESCGQCTPCR-------EGTGWLEEVLVRMEAGNADHGEIAMLEEISRQIEGHTICALGDAAAWPVQGLIRRFQHVIEDRI-DNPEGFDADA--HFQRAWSGEPFANGEWANAHGMGKTF 480
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BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A7S2B9D4_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B9D4_9STRA)

HSP 1 Score: 723 bits (1867), Expect = 5.070e-260
Identity = 348/431 (80.74%), Postives = 387/431 (89.79%), Query Frame = 0 
Query:    1 MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTY 431
            MWMGPDW+VQE+KDSGLRGRGGAGFPSGLKWSFMPK TDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY A   GF+GKNACGSGYDFDVYLHRGAGAY+CGEETALIESLEG+QGKPRLKPPFPANVGVFGCPSTVTNVET+AVAPTI RRGA+WFA FGRKNN GTKLF ISGHVNNP+VVEEEMSI+++ELLEKHCGGVRGGW+NLQ VIPGGSSVPV++ +  +  +MDFDDLK  GSALGTAAV VMDKSVDM+AAIRRLAHFY+HESCGQCTPCR       EGTGWLE++L++MEKG+AD REIPMLEEITR IEGHTICALGDAAAWPVQGLI++F+P +E R+         + + +FQ+AWSG  F NK++ ++FGDG+TY
Sbjct:   84 MWMGPDWMVQEIKDSGLRGRGGAGFPSGLKWSFMPKATDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYAA---GFLGKNACGSGYDFDVYLHRGAGAYVCGEETALIESLEGKQGKPRLKPPFPANVGVFGCPSTVTNVETIAVAPTIFRRGANWFASFGRKNNTGTKLFGISGHVNNPIVVEEEMSISLQELLEKHCGGVRGGWNNLQAVIPGGSSVPVMNFEQSSVALMDFDDLKAHGSALGTAAVTVMDKSVDMVAAIRRLAHFYRHESCGQCTPCR-------EGTGWLEEILVRMEKGDADVREIPMLEEITRQIEGHTICALGDAAAWPVQGLIKQFKPEMEARLTDFDS---FDPDAHFQRAWSGSEFSNKDYAEKFGDGKTY 501
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BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A7S3K1X1_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1X1_9STRA)

HSP 1 Score: 723 bits (1865), Expect = 5.680e-260
Identity = 352/428 (82.24%), Postives = 382/428 (89.25%), Query Frame = 0 
Query:    1 MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDG 428
            MWMGPDWIVQE+KDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLV+NADESEPGTCKDREIMRKDPHKL+EG LLAGYAMRARA YIYIRGEYFNEAVV+DEAIHEAYQA   G +GKNACGSGYD+DVYLHRGAGAYICGEETALIESLEG+QGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRG SWFA FGR+ N GTKLFAISGHVNNP VVEEEMSI MREL+EKHCGGVRGGWDNLQ VIPGGSSVP+L +D+C++ +MDFDDLK  GS LGTAAV VMDKSVDMIAAIRRL+HFY HESCGQCTPCR       EGT WLEQML++MEKG+AD REI MLEEITR IEGHTICALGDAAAWPVQGLIRRF+ V+E+RI   P  +  + +  FQKAWSG+PF+N EW +Q+G G
Sbjct:   66 MWMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKKSDGRPSFLVINADESEPGTCKDREIMRKDPHKLIEGTLLAGYAMRARACYIYIRGEYFNEAVVLDEAIHEAYQA---GLLGKNACGSGYDYDVYLHRGAGAYICGEETALIESLEGKQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGGSWFASFGRERNSGTKLFAISGHVNNPCVVEEEMSIPMRELIEKHCGGVRGGWDNLQAVIPGGSSVPILPLDECSEALMDFDDLKSRGSGLGTAAVTVMDKSVDMIAAIRRLSHFYSHESCGQCTPCR-------EGTSWLEQMLMRMEKGQADKREIDMLEEITRQIEGHTICALGDAAAWPVQGLIRRFKNVMEERI-NDPTAF--DHQAAFQKAWSGKPFNNHEWTQQYGAG 480
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BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: F0Y5S2_AURAN (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial (Fragment) n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y5S2_AURAN)

HSP 1 Score: 721 bits (1860), Expect = 1.750e-259
Identity = 352/429 (82.05%), Postives = 382/429 (89.04%), Query Frame = 0 
Query:    1 MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGR 429
            MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLV+NADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARA YIYIRGEYFNEA+VMDEAIHEAY A   G IGKNACGSGYDFD+YLHRGAGAY+CGEETALIESLEG+QGKPRLKPPFPANVGVFGCP+TVTNVET+AVAPTILRRGASWF GFGRKNN GTKLFAISGHVNNP+VVEEEMSI  REL++KHCGGVRGGW+ LQ VIPGGSSVPVL I++C + +MDFDDLK  GS LGTAAV VMD +VDMIAAIRRLAHFY+HESCGQCTPCR       EGTGWLE +L +ME G+AD REI ML+EI+R IEGHTICALGDAAAWPVQGLIRRFQPVIE+RIA  P+ +  + E +FQ AWSGE F N EW K+FG G+
Sbjct:   35 MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKASDGRPSFLVINADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARACYIYIRGEYFNEAMVMDEAIHEAYTA---GLIGKNACGSGYDFDMYLHRGAGAYVCGEETALIESLEGKQGKPRLKPPFPANVGVFGCPTTVTNVETIAVAPTILRRGASWFTGFGRKNNAGTKLFAISGHVNNPIVVEEEMSIPFRELIDKHCGGVRGGWNKLQAVIPGGSSVPVLPIEECEEALMDFDDLKARGSGLGTAAVTVMDDTVDMIAAIRRLAHFYRHESCGQCTPCR-------EGTGWLETILERMEVGDADVREIGMLDEISRQIEGHTICALGDAAAWPVQGLIRRFQPVIEERIAD-PQGF--DFEAHFQHAWSGEKFKNAEWTKEFGGGK 450
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BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A7S3L3M6_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L3M6_9STRA)

HSP 1 Score: 718 bits (1854), Expect = 3.470e-258
Identity = 351/431 (81.44%), Postives = 379/431 (87.94%), Query Frame = 0 
Query:    1 MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTY 431
            MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAY A   G IGKNACGSGYDFD+YLHRGAGAYICGEETALIESLEG+QGKPRLKPPFPA VGVFGCPSTVTNVET+AV+PTILRRGASWFA FGR+NN GTKLFAISGHV +P VVEE MSI +R+L+EKHCGG+R GWD++Q  IPGGSSVPVL+   C + +MDFDDL+  GS LGTAAV + DKSVDM+AAIRRL+HFYKHESCGQCTPCR       EGTGWLE +LI+MEKG+AD REIPMLEEI+R IEGHTICALGDAAAWPVQGLIR F+  IEDRI   P  +  + E  FQKAWSG+PFDN EW KQ G G+TY
Sbjct:   73 MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYSA---GLIGKNACGSGYDFDIYLHRGAGAYICGEETALIESLEGKQGKPRLKPPFPAGVGVFGCPSTVTNVETIAVSPTILRRGASWFASFGRENNRGTKLFAISGHVKSPKVVEESMSIPLRDLIEKHCGGMRNGWDSVQACIPGGSSVPVLNKALCDEALMDFDDLRSKGSGLGTAAVTMFDKSVDMVAAIRRLSHFYKHESCGQCTPCR-------EGTGWLEDVLIRMEKGDADKREIPMLEEISRQIEGHTICALGDAAAWPVQGLIRHFKKDIEDRI-DNPASF--DHEAAFQKAWSGDPFDNAEWTKQHGGGKTY 490
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BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: A0A7S0XD10_9STRA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XD10_9STRA)

HSP 1 Score: 705 bits (1819), Expect = 8.220e-253
Identity = 338/431 (78.42%), Postives = 375/431 (87.01%), Query Frame = 0 
Query:    1 MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTY 431
            +W GPDW++ E+K+SGLRGRGGAGFPSGLK+SFMPK  DGRPSFLVVNADESEPGTCKDREIMRKDP KLVEGCLL G++MRARAAYIYIRGEYFNEAVV+ EAIHEAYQA   GF+GKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPR+KPPFPAN+G+FGCP+T+TNVETVAV PTI RRGASWFAG GR NN GTKLF ISGHVNNP+VVEEEMSIT+R+LLEKHCGGVRGGW N+Q  IPGGSSVPV+D +DC D +MDFD LK  G+ALGTAAV V DKSVDM+AAIRRL+HFY HESCGQCTPCR       EGTGWLE++L K+E GE D REIPMLEEITR IEGHTICALGDAAAWPVQGLIRRF+ V+EDR+   P+ +  EK  YFQK+WSG PF N  W K+ G+ RT+
Sbjct:   75 LWQGPDWLISELKNSGLRGRGGAGFPSGLKYSFMPKKNDGRPSFLVVNADESEPGTCKDREIMRKDPQKLVEGCLLVGFSMRARAAYIYIRGEYFNEAVVLQEAIHEAYQA---GFLGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRIKPPFPANIGLFGCPTTITNVETVAVTPTIFRRGASWFAGLGRPNNRGTKLFGISGHVNNPIVVEEEMSITLRDLLEKHCGGVRGGWSNIQACIPGGSSVPVMDENDCQDAIMDFDGLKAKGTALGTAAVTVFDKSVDMVAAIRRLSHFYAHESCGQCTPCR-------EGTGWLEEILTKLETGEGDKREIPMLEEITRQIEGHTICALGDAAAWPVQGLIRRFKHVLEDRL-DNPQNWNEEK--YFQKSWSGLPFKNDAWAKEHGEDRTF 492
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BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Match: B8CBG7_THAPS (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial n=3 Tax=Ochrophyta TaxID=2696291 RepID=B8CBG7_THAPS)

HSP 1 Score: 705 bits (1819), Expect = 9.180e-253
Identity = 343/431 (79.58%), Postives = 374/431 (86.77%), Query Frame = 0 
Query:    1 MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNADESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVVMDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGFGRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQGVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIAAIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTREIPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYKSEKEKYFQKAWSGEPFDNKEWVKQFGDGRTY 431
            MWMGPDWIVQE+KDSGLRGRGGAGFPSGLKWSFMPK +DGRPSFLVVNADESEPGTCKDREIMRKDPHKL+EGCL+AGYAMRARAAYIYIRGEYFNEAVV+DEAIHEAY A   G IGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPA VG+FGCPSTVTNVETVAV+PTILRRGASWFAGFG  NN GTKLFAISGHV NP+VVEE MSI ++EL+EKHCGG+R GWD LQ  IPGGSSVPVL+   C + +M+FDDL+  GS LGTAAV + D SVDM+ AIRRL+HFYKHESCGQCTPCR       EGT WLE +LI+MEKG+AD REIPMLEEI+R IEGHTICALGDAAAWPVQGL+R F+  IEDRI   P  + +EK   FQ AWSG+PFDN EWV + GDG +Y
Sbjct:   78 MWMGPDWIVQEIKDSGLRGRGGAGFPSGLKWSFMPKESDGRPSFLVVNADESEPGTCKDREIMRKDPHKLIEGCLIAGYAMRARAAYIYIRGEYFNEAVVLDEAIHEAYAA---GLIGKNACGSGYDFDVYLHRGAGAYICGEETALIESLEGRQGKPRLKPPFPAGVGLFGCPSTVTNVETVAVSPTILRRGASWFAGFGNPNNRGTKLFAISGHVKNPIVVEESMSIPLQELIEKHCGGMRNGWDTLQACIPGGSSVPVLNKAQCDEALMEFDDLRAKGSGLGTAAVTMFDNSVDMVGAIRRLSHFYKHESCGQCTPCR-------EGTSWLEDILIRMEKGDADKREIPMLEEISRQIEGHTICALGDAAAWPVQGLLRHFKKDIEDRI-DDPSSFDAEKA--FQYAWSGDPFDNSEWVDKHGDGMSY 495
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9816.23915.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZX3_ECTSI2.130e-29891.94NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A835ZC73_9STRA1.740e-26583.29NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A7S3MFV3_9STRA2.700e-26182.37NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A7S1TYU1_9STRA4.720e-26083.22NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A7S2B9D4_9STRA5.070e-26080.74NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A7S3K1X1_9STRA5.680e-26082.24NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
F0Y5S2_AURAN1.750e-25982.05NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A7S3L3M6_9STRA3.470e-25881.44NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
A0A7S0XD10_9STRA8.220e-25378.42NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]
B8CBG7_THAPS9.180e-25379.58NADH dehydrogenase [ubiquinone] flavoprotein 1, mi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019575NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domainSMARTSM00928NADH_4Fe_4S_2coord: 299..351
e-value: 3.5E-17
score: 73.1
IPR019575NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domainPFAMPF10589NADH_4Fe-4Scoord: 301..389
e-value: 9.9E-24
score: 83.2
NoneNo IPR availableGENE3D3.10.20.600coord: 200..296
e-value: 7.1E-39
score: 133.9
NoneNo IPR availableSUPERFAMILY142984Nqo1 middle domain-likecoord: 209..294
IPR037207NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamilyGENE3D1.20.1440.230coord: 297..405
e-value: 5.9E-29
score: 101.9
IPR037207NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamilySUPERFAMILY140490Nqo1C-terminal domain-likecoord: 295..396
IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilyGENE3D3.40.50.11540coord: 17..198
e-value: 6.6E-79
score: 265.7
IPR037225NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamilySUPERFAMILY142019Nqo1 FMN-binding domain-likecoord: 2..208
IPR011538NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domainPFAMPF01512Complex1_51Kcoord: 12..185
e-value: 8.5E-49
score: 165.3
IPR011537NADH ubiquinone oxidoreductase, F subunitTIGRFAMTIGR01959TIGR01959coord: 3..391
e-value: 1.4E-177
score: 588.1
IPR011537NADH ubiquinone oxidoreductase, F subunitPANTHERPTHR11780NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1coord: 3..397
IPR019554Soluble ligand binding domainPFAMPF10531SLBBcoord: 211..261
e-value: 1.8E-7
score: 30.9
IPR001949NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved sitePROSITEPS00644COMPLEX1_51K_1coord: 135..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9816contigP-canaliculata_contig9816:2261..10647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9816.23915.1mRNA_P-canaliculata_contig9816.23915.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9816 2015..10667 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9816.23915.1 ID=prot_P-canaliculata_contig9816.23915.1|Name=mRNA_P-canaliculata_contig9816.23915.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=435bp
MWMGPDWIVQEMKDSGLRGRGGAGFPSGLKWSFMPKNTDGRPSFLVVNAD
ESEPGTCKDREIMRKDPHKLVEGCLLAGYAMRARAAYIYIRGEYFNEAVV
MDEAIHEAYQASQKGFIGKNACGSGYDFDVYLHRGAGAYICGEETALIES
LEGRQGKPRLKPPFPANVGVFGCPSTVTNVETVAVAPTILRRGASWFAGF
GRKNNHGTKLFAISGHVNNPMVVEEEMSITMRELLEKHCGGVRGGWDNLQ
GVIPGGSSVPVLDIDDCADVMMDFDDLKRAGSALGTAAVLVMDKSVDMIA
AIRRLAHFYKHESCGQCTPCRRDIKILLEGTGWLEQMLIKMEKGEADTRE
IPMLEEITRAIEGHTICALGDAAAWPVQGLIRRFQPVIEDRIAGGPEQYK
SEKEKYFQKAWSGEPFDNKEWVKQFGDGRTYGRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019575Nuop51_4Fe4S-bd
IPR037207Nuop51_4Fe4S-bd_sf
IPR037225Nuo51_FMN-bd_sf
IPR011538Nuo51_FMN-bd
IPR011537NADH-UbQ_OxRdtase_suF
IPR019554Soluble_ligand-bd
IPR001949NADH-UbQ_OxRdtase_51kDa_CS