prot_P-canaliculata_contig98151.23914.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig98151.23914.1
Unique Nameprot_P-canaliculata_contig98151.23914.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length179
Homology
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BLAST of mRNA_P-canaliculata_contig98151.23914.1 vs. uniprot
Match: A0A7W7ISC3_9CAUL (Uncharacterized protein n=1 Tax=Brevundimonas bullata TaxID=13160 RepID=A0A7W7ISC3_9CAUL)

HSP 1 Score: 348 bits (893), Expect = 2.300e-120
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0 
Query:    1 WRDLALHTLPVATVLGFLAVIVFLNSVFGIWGLSVAQLVTPGDTIVPGVILGILLVALFMFAFIPGTLLDPILKKMPMRIRPYALAGVVAASAVFWIPNGVGGFGVKFVATLIALGCAMHPFLNRHDFEKIPHMAKAAIVVVFAPAAVWLTLAFTEAPKLFAASGFMSGASIEKQEGVP 179
            WRDLALHTLPVATVLGFLAVIVFLNSVFGIWGLSVAQLVTPGDTIVPGVILGILLVALFMFAFIPGTLLDPILKKMPMRIRPYALAGVVAASAVFWIPNGVGGFGVKFVATLIALGCAMHPFLNRHDFEKIPHMAKAAIVVVFAPAAVWLTLAFTEAPKLFAASGFMSGASIEKQEGVP
Sbjct:   14 WRDLALHTLPVATVLGFLAVIVFLNSVFGIWGLSVAQLVTPGDTIVPGVILGILLVALFMFAFIPGTLLDPILKKMPMRIRPYALAGVVAASAVFWIPNGVGGFGVKFVATLIALGCAMHPFLNRHDFEKIPHMAKAAIVVVFAPAAVWLTLAFTEAPKLFAASGFMSGASIEKQEGVP 192
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98151.23914.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7W7ISC3_9CAUL2.300e-120100.00Uncharacterized protein n=1 Tax=Brevundimonas bull... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 80..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 155..179
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..123
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 69..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 124..134
NoneNo IPR availableTMHMMTMhelixcoord: 101..123
NoneNo IPR availableTMHMMTMhelixcoord: 45..67
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 135..157
NoneNo IPR availableTMHMMTMhelixcoord: 80..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig98151contigP-canaliculata_contig98151:533..1069 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig98151.23914.1mRNA_P-canaliculata_contig98151.23914.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig98151 533..1069 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig98151.23914.1 ID=prot_P-canaliculata_contig98151.23914.1|Name=mRNA_P-canaliculata_contig98151.23914.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=179bp
WRDLALHTLPVATVLGFLAVIVFLNSVFGIWGLSVAQLVTPGDTIVPGVI
LGILLVALFMFAFIPGTLLDPILKKMPMRIRPYALAGVVAASAVFWIPNG
VGGFGVKFVATLIALGCAMHPFLNRHDFEKIPHMAKAAIVVVFAPAAVWL
TLAFTEAPKLFAASGFMSGASIEKQEGVP
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