prot_P-canaliculata_contig98128.23912.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig98128.23912.1
Unique Nameprot_P-canaliculata_contig98128.23912.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length179
Homology
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BLAST of mRNA_P-canaliculata_contig98128.23912.1 vs. uniprot
Match: UPI0007EC79E1 (hypothetical protein n=2 Tax=Tenacibaculum ovolyticum TaxID=104270 RepID=UPI0007EC79E1)

HSP 1 Score: 58.2 bits (139), Expect = 9.170e-7
Identity = 51/173 (29.48%), Postives = 81/173 (46.82%), Query Frame = 0 
Query:   14 WHYSDFLVEKYKSPVHELVKEEKER--RRYKVDNKGSILFVKGVKK---DYDILINDKGKEFKVYDLNVLENIINKDFLIKYYIDSETKDIGSEKIKIQYFELFKLSFQER---KKLYEFIAESVSVEISFSNWDVNKTFISTTHQDNQDNSISYLKRIYKIKNLNHHVHSHP 178
            WH +    E YKSPV    K+EK +  R+Y+++  G I   +G  K   DYDIL+N KG+E ++YD N+L  +             +TK + S K+      + K+S + +    K++ F  ++ S E  F     NK  + T   D  +NS    +       +   +HSHP
Sbjct:  132 WHITSIEEEGYKSPVQAAEKKEKNKNLRKYQINQTGHITLCEGKIKNVGDYDILMNLKGEEIRIYDTNILPQL------------EKTKIVESYKVS-----MVKVSVKSKYDLAKVFLFSVDNSSPEWRFIRTTKNKYILGTHFSD--ENSPGNSELGITSSKIFSDIHSHP 285
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BLAST of mRNA_P-canaliculata_contig98128.23912.1 vs. uniprot
Match: UPI00095098F8 (hypothetical protein n=1 Tax=Cellulophaga lytica TaxID=979 RepID=UPI00095098F8)

HSP 1 Score: 55.5 bits (132), Expect = 8.170e-6
Identity = 33/87 (37.93%), Postives = 50/87 (57.47%), Query Frame = 0 
Query:    2 QRINKTALNVYRWHYSDFLVEKYKSPVHELVKEEKERRRYK----VDNKGSILFVKGVKKDYDILINDKGKEFKVYDLNVLENIINK 84
            QRINK  LNV+RWHYSD+ +E+Y+SPV+ +V+E KE+   K      N+G  +   G    Y  L+        + D ++L++ I K
Sbjct:  135 QRINKKVLNVFRWHYSDYDLEEYQSPVNTVVEETKEKLHLKDGFYFSNQGEFIGRMGNNHKYSNLVFVFSDNLTISDKSLLKSEIKK 221
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98128.23912.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI0007EC79E19.170e-729.48hypothetical protein n=2 Tax=Tenacibaculum ovolyti... [more]
UPI00095098F88.170e-637.93hypothetical protein n=1 Tax=Cellulophaga lytica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028218JAB-like toxin 1PFAMPF15659Toxin-JAB1coord: 118..179
e-value: 1.0E-6
score: 29.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig98128contigP-canaliculata_contig98128:16..552 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig98128.23912.1mRNA_P-canaliculata_contig98128.23912.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig98128 16..552 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig98128.23912.1 ID=prot_P-canaliculata_contig98128.23912.1|Name=mRNA_P-canaliculata_contig98128.23912.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=179bp
FQRINKTALNVYRWHYSDFLVEKYKSPVHELVKEEKERRRYKVDNKGSIL
FVKGVKKDYDILINDKGKEFKVYDLNVLENIINKDFLIKYYIDSETKDIG
SEKIKIQYFELFKLSFQERKKLYEFIAESVSVEISFSNWDVNKTFISTTH
QDNQDNSISYLKRIYKIKNLNHHVHSHPK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028218Toxin-JAB1