prot_P-canaliculata_contig98.23894.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig98.23894.1
Unique Nameprot_P-canaliculata_contig98.23894.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length1605
Homology
BLAST of mRNA_P-canaliculata_contig98.23894.1 vs. uniprot
Match: D7FJS0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJS0_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 1.350e-106
Identity = 522/1713 (30.47%), Postives = 692/1713 (40.40%), Query Frame = 0
Query:    1 PAGWLSTAISSGKLGVAADDID-DDDGQTGEDGRSLKMVTSSTQDRETEDSTRAPAST------LPPWAARWTPP-SPDPPPEVEEKSTVVSEAKPKPSGLDWIKSEMPYWLKEV----SSR---GGVSMHDTVASARNSDGAVLSGRGGETNVA-PPTVGAAAS----ESGVDCVVDSVVSEKTEARVREGREERYPSAMTAAATS--------GGWLTSGKLGVSIEKDSGDEVGTGGVCDSGYELSTARKGRKPKSDVKTSSSATIPTTTGPGGWLASGTLGVPVDDESERTAQDGDGCMRGSFMMSEETQTEEDIEEVAKKGTGSKLPPWAKPWTPPPEPDVTVDP-------VPPRDKDTKKQDIAVVVTPDWILASLGQGDDNAAAETATSEGLDSEGNGLDWLAKVVDPASSSVQGLPPAAAGSNTSDWLLHTVVDGGGGVGGAKLKKPNQP-----STSVAPDALSWMTKMKRRSSIDLEDPCVEALVVETKTKAEPGGWMQSGALGSPDSIEEEKALEEARAAS----------SHSRGRRESLAGGLPPWAPMQQQKKAPVLVDAAPATSXXXXXXXXXXXXXXAP-------AVATEASSRLRKAGAPSTHKDARQGGCSSEKQQAQQLALPDWLTIAAVSQCPCIFDNRDRLQENRDDCDAVADDREGGLDWLKAAITSDKKVAATPSAIVTVHESVDESRSTQAAMSIAVGDSVHGGGTKNVVRRRS-SLVTTEGWISMN-LGLPV----DDEYALNGKESDVRGTGMVSKTAKKRSPGIAANDDRGLVVQPAGWLSAAISTGKIGVAADDSDDDDGQTGEDGRSLNMVSSSTHWEDGETEDRTRAPAST-----FPPWAERWTPPSPDPP--PEIEEQPTVES-EAKPKPSG--LDWIKNEMSCTPADTSKGASAGDDKVVA---NGCSNTIGESSGLDWLKETNATSAPPTVGATVGGSGI-DRLVDAAASEKTEARVREGREDRNPSAMTAAATSGDWLTSGKLGVSIEKASGDDAGTGGVCDSGHGLSTGRKSKPGVKTSSSAIISTATGPGGWLASGTLGVPVDDESERSAQDGEEGMRGSFMVSEETQTEEDIEEIAKKGTGSKLPPWAKPWTPPSEPDATGDPVPLRDKDNKKQDIAVAVTPDWILASLGQSHDDAPAETATSGGLDSEGKGLDWLAKVLDPGSMLLPTAAGSNTFDWLLQTVVGGGGGAGEAK--------LKKKPNQPSTSVAPNPLSWMTKMKHRSSIDLEDPCTEALVVEAKTKAGRGSWMQSGTLGAPDSIEEEKALEEARAASSYPRPSNKACSSD---ATADRHPSLSDGAPAWTLKQLTETGAGESKEPWRGRRGSLAGGLPPWAPTQQQ-------EKAPVLVDVAPATSXXXXXXXXXXXXXXVPSVATELSSRLNHGGYVSPCVPEPLAGSVGKAGAPSTYYEDTRQGWCSSEKQQAQQLTLPDWLTVAAGGSSTKAEKRFPGIAANDDIEPVAQPAGWLSAAISTGKIGVAADDAAARGSGIDWLVDTAASEKTEARVREGREERNPYAMTAAATG-GWLTSGKLGVSTEKDRGHE----AGTGGVCGSGHELSTGRKPKSGIKMSSSATIPTTTGPGGWLA----SGTLGVPVDDESERSTQDVDGGMRSSFMVSGETQTEEYIEEVAKKGIG----SKLPPWAKPWTPP 1605
            P GW+S    SG LG  A+D   D+D   GE  R + +   +  + + E  T+  A+       LPPWA  + PP  P+  P+   K+    +  P+  G     SE+P WL  V    SSR    G  + +   +A   D A   G    T  A   T GAAA                      A    G+ +R P A   AA          GGWL+S KLGVS E+DS  +       D+G     + K +K K   + S S                       +          G      +++ ETQTE+DIE V ++G   KLPPWAKP+ PPP+ DV  D        +PP  ++T         TPDWILASLG  D +  +    + G    G   +WL++  +    +     P    +N  DWL                  P Q        +V    LSWM ++KR+SS+DL+D  VE  V + K KA PGGW+Q G LG+PD++ EE  LE+ARAAS          S S GRR SL+GG PPWAP +++     + D+   T+     XXXXXXXXX         AVA EA +  +K G+    K+  +   S        + + DWL  AA +      ++ + L E RD  D  A     GL WL  A  S K  AA      T    VD S     A  +AV  S         V+R S       GW+S   LGLP     DD+ A  GK S   G+G V+K              RG V                         ++G  G++ R    V+  T  +D + E  TR  A        PPWA+ + PP P P   P+   + T+E  E +P  SG    W+   ++  PAD     + G ++ +     G     G + GL WL E    ++  T  AT   + + D L DA +   T+         R   A   +A  G W++SGKLGVS     G D    G  D G      +K +P     S   +S A GP GWL+SG LGVP  DES+    D + G     M + ETQTEE+IEE  K   G KLP                          ++ D     TPDWILASLG   + A A  A  G   S G   DWL +    G     T  GSN  DWL Q        A  AK          ++P     +   +PLSWMT MK RSS+DL D   E  + +AK K   G W+Q G LGAPD++EE  ALEEARAASS  R S     +    AT  R PSL  G P W  K  T   A  S    RGR               QQ       E+     D +P   XXXXXXXXXXXXX    VA                            G+P++      +      + +     LPDWLT AAGG S   + R  G  +  D +      GWL+          + D   ++ +    L D A +E+T A   +          +    G GWL++  +     K R HE    A +  V  S       ++                T PGGWLA    SG LG   DD       D       +      TQT++ +   AKK +     SK P   KP  PP
Sbjct:  580 PGGWMS----SGALGAPAEDESGDEDSGGGETDRGVGVTIETQTEEDIEAVTKGGATEKGNAPKLPPWAKPYVPPPKPEVVPDTPPKADSAPQGAPEKQG-----SEIPDWLAAVAGTSSSREDPSGAMIEEAGPTAGQEDSAGGGGLSWLTQAARSSTFGAAAPIDXXXXXXXXXXXXXXXXXXXAAKSTGQTKRKPHATATAAAKAAAVPAAPGGWLSSVKLGVSTEEDSDQD-------DAGKTAGRSTKSKKKKKQARGSVSVASXX------XXXXXXXXXXXPEXXXXXXXXXGGGDSQPVLVTMETQTEDDIEGVTERGNVPKLPPWAKPYVPPPKDDVAPDSTADSTAEIPPEKEETDAS-----ATPDWILASLGDQDADGFSGGVPASG----GGSNNWLSQAAEQEPGAGASDMPNTGDTNAPDWLQQAAAPNAKPKHRQAASMPQQRPGIARKAAVPASPLSWMKQVKRQSSMDLDDQTVETTVAQAKAKAAPGGWLQIGVLGAPDALAEENELEQARAASPLTSTGPESRSRSEGRRPSLSGGPPPWAPAKEEG---AVGDSGSTTTSTHDVXXXXXXXXXXXXXXXXPTAVAAEAETTEQKEGSEEAAKEKGEPATSG-------VRVSDWLAAAATTGTASGEESTNALGEERDQQDGEASGGSDGLSWLTQAADSHKPSAAASGIPSTA--GVDSSEGDAGADWLAVAKSSGQAKRSPAVKRPSVGAAAPGGWMSSGKLGLPAGDGSDDDQA--GKTS---GSGGVAKAKXXXKA-------RGSVSGTXXXXXXXXXXXXXXXXXXXXXXEEGSGGDNDRRGAAVTIETQTDD-DIEAATRGAAERGSTRKLPPWAKPYVPPDPIPEVVPDTAAELTIEKQELEPAGSGGVPSWLAA-VAGAPADEKHSDALGQERALEADEGGVGQASGGNDGLGWLTEA---ASKDTAAATPASTSVPDWLGDATSRGMTKHNKSSTAAKR---ASIKSAAPGGWMSSGKLGVSTGD-DGSDEDQAGKTDRGSAKPRKKKKQP-----SRGSVSAAGGPAGWLSSGALGVPAQDESDEDGGDSDGGR--PLMATTETQTEENIEEATKTANGPKLPXXXXXXXXXXXXXXXXXXXXXXXXXEQEHDTPA--TPDWILASLGPDAEGAAAAPAPGG---SPG---DWLVQENQAGGGPTGTGGGSNGPDWLQQATA-----APTAKPANRSRGAATQRPGGGRKAATQSPLSWMTSMKRRSSMDLNDQGVEEAIAQAKAKTIPGGWLQMGALGAPDAVEEANALEEARAASSLTRTSTNGKGTPGAAATDVRRPSLEQGLPPWAPKLATTALASSSSS--RGRXXXXXXXXXXXXXQHQQGGGSPSAEQLKARADESPXXXXXXXXXXXXXXXXADKKVAAGSDGSSRRRXXXXXXXXXXXXXXAAPGGSPTSRSRGQEEDELPVPESEQATPALPDWLTAAAGGGSAPKDTRGDG-ESTIDTDDDGGGLGWLTQXXXXXTTSKSQDRKGSQEAADTALDDEARTERTAAGSTDAACNDVSSEHSGGGEGLGWLSAAVVRRPQMKSRTHELQPTATSTNVVASKSRAQ--QRXXXXXXXXXXXXXXXXTAPGGWLALSVASGNLGGLSDDGESHLVGDGTNNGGDTGKEDTATQTDDVVIVEAKKSVSEQTTSKNP--TKPKLPP 2201          
BLAST of mRNA_P-canaliculata_contig98.23894.1 vs. uniprot
Match: A0A6H5KKG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKG6_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 1.870e-44
Identity = 171/486 (35.19%), Postives = 216/486 (44.44%), Query Frame = 0
Query:   24 DDGQTGEDGRSLKMVTSSTQ-DRETEDSTRAPAST-----LPPWAARWTPPSPDPPPEVEEKSTVVSEAKPKPSGLDWIKSEMPYWLKEVSSRGGVSMHDTVASARNSDGAVLSGRGGETNVAPPTVGAAASESGVDCVVDSVVSEKTEARVREGREERYPSAMTAAATSGGWLTSGKLGVSIEKDSGDEVGTGGVCDSGYELSTARKGRKPKSDVKTSSS-ATIPTTTGPGGWLASGTLGVPVDDESERTAQDGDGCMRGSFMMSEETQTEEDIEEVAKKGTGSKLPPWAKPWTPPPEPDVTVDPVPPRDKDTKKQDIAVVVTPDWILASLGQGDDNAAAETATSEGLDSEGNGLDWLAKVVDPASSSVQGLPPAAAGSNTS-DWLLHTVVDGGGGVG----GAKLKKPNQPSTSVAPDALSWMTKMKRRSSIDLEDPCVEALVVETKTKAEPGGWMQSGALGSPDSIEEEKALEEARAASSHSR 497
            ++G  GE  R    V   TQ D + E +TR  A       LPPWA  + PP  DP  EV   +   S  + K    D +  E      E    GGV      +  R+  G +       T  A P     AS S  D +  +     T+   R    +R   A   +A  GGW++SGKLG++   DS DE   G          T R   KP+   K      ++P   GP GWL+SG LGVP   ES+    D DG      M + ETQTE++IE   K   G KLPPWAKPWTP P                         TPDWILASL    + AAA  A        G+  DW  +      +   G P    G +T  DWL        G       GA  ++P     + A   LSWM+ MKRRSS+DL D  VE  + + K K  PGGW+Q GALG+PD++EE  ALEEARAASS +R
Sbjct:  402 EEGSGGEKDRRGAAVNIETQTDNDIEAATRGAAEKGDTRKLPPWAKPYVPP--DPTQEVVPDTAAESTIE-KQKNSDALGQERALEADE----GGVGQ---ASGGRDGLGWLTEAANKNTAAATP-----ASSSAPDWLAGAKSRGTTKHNKRSTAAKR---ASIGSAAPGGWMSSGKLGLATGDDSSDEDQAG---------KTDRGSAKPRMKKKKQQRRGSVPAAGGPAGWLSSGALGVPAQYESDENGGDSDGGR--PLMATTETQTEDNIEAATKTANGPKLPPWAKPWTPXPPXXXXXXXX--XXXXXXXXXXXXPGTPDWILASLDPDTEGAAAAPAPG------GSPGDWHVQ-----ENQAGGGPAGTGGGSTGPDWLQQATAASTGKPANRWRGAATQRPGGGRKAAAQSPLSWMSSMKRRSSMDLNDQGVEEAIAQAKAKTIPGGWLQIGALGAPDAVEEANALEEARAASSLTR 845          
BLAST of mRNA_P-canaliculata_contig98.23894.1 vs. uniprot
Match: A0A6H5KVL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVL2_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 6.920e-34
Identity = 119/343 (34.69%), Postives = 161/343 (46.94%), Query Frame = 0
Query:  172 GREERYPSAMTAAATS--------GGWLTSGKLGVSIEKDSGDEVGTGGVCDSGYELSTARKGRKPKSDVKTSSSATIPTTTGPGGWLASGTLGVPVDDESERTAQDGDGCMRGSFMMSEETQTEEDIEEVAKKGTGSKLPPWAKPWTPPPEPDV----TVDPVPPRDKDTKKQDIAVVVTPDWILASLGQGDDNAAAETATSEGLDSEGNGLDWLAKVVDPASSSVQGLPPAAAGSNTSDWLLHTVVDGGGGVGGAKLKKPNQPS-----TSVAPDALSWMTKMKRRSSIDLEDPCVEALVVETKTKAEPGGWMQSGALGSPDSIEEEKALEEARAASSHSR 497
            G+ +R P A   AA          GGWL+SGKLGVS E+++  +       D+G    TA +   PK   K +  A +P                            GDG      +++ ETQTE+DIE V ++G   KLPPWAKP+ PPP+ DV    T D      K  +K++      PDWILA+LG  D +       + G    G   +WL+   +    +     P    +N  DWL                  P Q S      +V    LSWM ++KRRSS+DL+DP VE  V + K KA PGGW+Q GALG+PD++ EE  LE+ARAAS  +R
Sbjct:  761 GQTKRKPHATATAAAKAAAVPAAPGGWLSSGKLGVSTEEENDQD-------DAGK---TAGRSTTPKKKKKQAIGA-VPVAXXXXXXXXXXXXXXXXXXXXXXXXGGGDGQ---PILVTMETQTEDDIEGVTERGNVPKLPPWAKPYVPPPKDDVVPESTADSX--XXKTPEKEETDASAAPDWILAALGDQDADGFRGGVPASG----GGSKNWLSHAAEQEPGAGASDMPNTGDTNAPDWLQQAAAPSAKPKDRQAASIPQQRSGIARKAAVPASPLSWMKQVKRRSSMDLDDPTVETTVAQAKAKAAPGGWLQIGALGAPDALAEENELEQARAASPRTR 1083          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig98.23894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FJS0_ECTSI1.350e-10630.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KKG6_9PHAE1.870e-4435.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVL2_9PHAE6.920e-3434.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig98contigP-canaliculata_contig98:37335..49566 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig98.23894.1mRNA_P-canaliculata_contig98.23894.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig98 37335..49566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig98.23894.1 ID=prot_P-canaliculata_contig98.23894.1|Name=mRNA_P-canaliculata_contig98.23894.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=1605bp
PAGWLSTAISSGKLGVAADDIDDDDGQTGEDGRSLKMVTSSTQDRETEDS
TRAPASTLPPWAARWTPPSPDPPPEVEEKSTVVSEAKPKPSGLDWIKSEM
PYWLKEVSSRGGVSMHDTVASARNSDGAVLSGRGGETNVAPPTVGAAASE
SGVDCVVDSVVSEKTEARVREGREERYPSAMTAAATSGGWLTSGKLGVSI
EKDSGDEVGTGGVCDSGYELSTARKGRKPKSDVKTSSSATIPTTTGPGGW
LASGTLGVPVDDESERTAQDGDGCMRGSFMMSEETQTEEDIEEVAKKGTG
SKLPPWAKPWTPPPEPDVTVDPVPPRDKDTKKQDIAVVVTPDWILASLGQ
GDDNAAAETATSEGLDSEGNGLDWLAKVVDPASSSVQGLPPAAAGSNTSD
WLLHTVVDGGGGVGGAKLKKPNQPSTSVAPDALSWMTKMKRRSSIDLEDP
CVEALVVETKTKAEPGGWMQSGALGSPDSIEEEKALEEARAASSHSRGRR
ESLAGGLPPWAPMQQQKKAPVLVDAAPATSRRSNLRGGMPPWAPAPAVAT
EASSRLRKAGAPSTHKDARQGGCSSEKQQAQQLALPDWLTIAAVSQCPCI
FDNRDRLQENRDDCDAVADDREGGLDWLKAAITSDKKVAATPSAIVTVHE
SVDESRSTQAAMSIAVGDSVHGGGTKNVVRRRSSLVTTEGWISMNLGLPV
DDEYALNGKESDVRGTGMVSKTAKKRSPGIAANDDRGLVVQPAGWLSAAI
STGKIGVAADDSDDDDGQTGEDGRSLNMVSSSTHWEDGETEDRTRAPAST
FPPWAERWTPPSPDPPPEIEEQPTVESEAKPKPSGLDWIKNEMSCTPADT
SKGASAGDDKVVANGCSNTIGESSGLDWLKETNATSAPPTVGATVGGSGI
DRLVDAAASEKTEARVREGREDRNPSAMTAAATSGDWLTSGKLGVSIEKA
SGDDAGTGGVCDSGHGLSTGRKSKPGVKTSSSAIISTATGPGGWLASGTL
GVPVDDESERSAQDGEEGMRGSFMVSEETQTEEDIEEIAKKGTGSKLPPW
AKPWTPPSEPDATGDPVPLRDKDNKKQDIAVAVTPDWILASLGQSHDDAP
AETATSGGLDSEGKGLDWLAKVLDPGSMLLPTAAGSNTFDWLLQTVVGGG
GGAGEAKLKKKPNQPSTSVAPNPLSWMTKMKHRSSIDLEDPCTEALVVEA
KTKAGRGSWMQSGTLGAPDSIEEEKALEEARAASSYPRPSNKACSSDATA
DRHPSLSDGAPAWTLKQLTETGAGESKEPWRGRRGSLAGGLPPWAPTQQQ
EKAPVLVDVAPATSRRSSLGGGMPPWAPVPSVATELSSRLNHGGYVSPCV
PEPLAGSVGKAGAPSTYYEDTRQGWCSSEKQQAQQLTLPDWLTVAAGGSS
TKAEKRFPGIAANDDIEPVAQPAGWLSAAISTGKIGVAADDAAARGSGID
WLVDTAASEKTEARVREGREERNPYAMTAAATGGWLTSGKLGVSTEKDRG
HEAGTGGVCGSGHELSTGRKPKSGIKMSSSATIPTTTGPGGWLASGTLGV
PVDDESERSTQDVDGGMRSSFMVSGETQTEEYIEEVAKKGIGSKLPPWAK
PWTPP
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