prot_P-canaliculata_contig97915.23888.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig97915.23888.1
Unique Nameprot_P-canaliculata_contig97915.23888.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length334
Homology
BLAST of mRNA_P-canaliculata_contig97915.23888.1 vs. uniprot
Match: A0A518CVV2_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Pla163 TaxID=2528008 RepID=A0A518CVV2_9BACT)

HSP 1 Score: 193 bits (491), Expect = 4.070e-54
Identity = 141/341 (41.35%), Postives = 181/341 (53.08%), Query Frame = 0
Query:    1 ESAALFDLLGHLGLGPSAAAKLEAGAGEAASLASFASVAWDARTQVAKARLALAAIRARRQAVLVLADEASSDLGRIEILQRTGRVGLAPARAAHGMVAALERRASVLAEMESVARAVLARAAGMTPDDPALE------QPGAELLLHLSEGPLPAEPTGEGEL-RHPSLTEAHLEVALREARVRSAAAASWPGIGVGPHLSLPSGGLRDTIRVGGLFQVTLPLPSSWRGIMESRLELRAAAVEGYVDALVDLRSRARDAETRALEIQGRS-GFTAAVHHAAEDAWISARAGFRVGRVDLNLWIQALERQGNAITMPIDDLEALALAALDLEWAAGPEAAR 333
            E  A FDLLG LG+GP+ + +  A A    + A   S  W +   V  ARL   A  AR + +  + ++AS+D  RI IL   G +G APA AA   V ++ER  S +A   +  RA LA AAG+ P+D A E      +P +E  L       P    G+G L  HP L E     ALREA VRS A ++WP +G+GPHL     G  D + +GG+ Q+TLP PSSWRG +   +E R A +E Y D L  L    R A  R  EI  R+ G T  V   +   W +ARA FRVGR+ +  WI AL R+  A T  IDD EALALA + L  A GP   R
Sbjct:  142 ELVATFDLLGLLGIGPARSERERAAAAVVVAAAELESEIWRSWLTVDAARLRFQAAAARERLLAEVLEQASADFDRIVILHERGWIGDAPAAAARAAVGSVERARSSVAADVAARRATLAHAAGVPPEDGAFEALLAPDRPASEPALR------PNAELGDGALFEHPRLRELRTRFALREAEVRSVATSAWPNVGIGPHL-----GYEDDLAIGGVLQLTLPFPSSWRGRLAGAVERRDAVIEAYEDELHLLLVEERSARERRDEIHRRTTGATRLVVEGSTAGWSAARASFRVGRMPVLEWIDALYRRLGATTAEIDDAEALALAQVALAGARGPAGTR 471          
BLAST of mRNA_P-canaliculata_contig97915.23888.1 vs. uniprot
Match: A0A518EUV2_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EUV2_9BACT)

HSP 1 Score: 167 bits (422), Expect = 5.640e-44
Identity = 128/345 (37.10%), Postives = 179/345 (51.88%), Query Frame = 0
Query:    1 ESAALFDLLGHLGLGPSAAAKLEAGAGEAASLASFASVAWDARTQVAKARLALAAIRARRQAVLVLADEASSDLGRIEILQRTGRVGLAPARAAHGMVAALERRASVLAEMESVARAVLARAAGMTPD----DPALEQPGAELLLHLSEG----PLPAEPTGEGEL--RHPSLTEAHLEVALREARVRSAAAASWPGIGVGPHLSLPSGGLRDTIRVGGLFQVTLPLPSSWRGIMESRLELRAAAVEGYVDALVDLRSRARDAETRALEIQGR----SGFTAAVHHAAEDAWISARAGFRVGRVDLNLWIQALERQGNAITMPIDDLEALALAALDLEWAAGPEA 331
            E+  +FDL+G LGLGPS A +  A A    +      VA+++   V +AR+ + A R R Q +  L + A++DL R+ IL+   R+  A A  A   VA LERR  + A     AR  LAR +G  PD     P ++  G   L  ++ G    P P        L   HP+L +A L  A+REA VR AAA +WPG+G+GPHL     G  +  ++G + + ++P PSSW+G +E+ +E R  A+E + + LV    R  +A+ R   +Q       G T      A   W +AR  FR GR     W QAL   G  +  PIDD+EALALA LD+  A GP A
Sbjct:  137 EAIGVFDLIGLLGLGPSRAERERASAETLLAAGRLEHVAFESWIAVERARIGVVATRLRWQRLAELIETATADLERVRILEENDRLSDADAGLARAEVARLERRQLLAAAALETARMELARLSGSVPDAGHFGPDVQAVGEAGLAEVAYGNVMDPWPPMENAPAFLADHHPALRQARLRFAVREAEVREAAARAWPGVGLGPHL-----GYLNHAQLGMIARFSIPFPSSWKGRLEAAVERRDRALEEFEETLVAFSGRLVEAKARLGSLQAAVDDDHGATRRATDPAIQHWEAARTRFRAGRGSAAGWTQALNHVGETLNWPIDDVEALALARLDVTAATGPGA 476          
BLAST of mRNA_P-canaliculata_contig97915.23888.1 vs. uniprot
Match: A0A2D5XR75_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5XR75_9BACT)

HSP 1 Score: 163 bits (412), Expect = 9.920e-43
Identity = 129/335 (38.51%), Postives = 184/335 (54.93%), Query Frame = 0
Query:    1 ESAALFDLLGHLGLGPSAAAKLEAGAGEAASLASFASVAWDARTQVAKARLALAAIRARRQAVLVLADEASSDLGRIEILQRTGRVGLAPARAAHGMVAALE----RRASVLAEMESVARAVLARAAGMTPDDPALEQPGAELLLHLSEGPLPAEPTGEGELR-HPSLTEAHLEVALREARVRSAAAASWPGIGVGPHLSLPSGGLRDTIRVGGLFQVTLPLPSSWRGIMESRLELRAAAVEGYVDALVDLRSRARDAETRALEIQGRSGFTA-AVHHAAEDAWISARAGFRVGRVDLNLWIQALERQGNAITMPIDDLEALALAALDLEWAAGP 329
            ES A FDLLG LG+G SAA + +A      +        W AR  V +AR+ LAA+RAR++ + VL  E   D+ R  ILQ   R+      A  G+++A E    ++ S+LA  E+  R  LA AAG+  D PAL++P  + L  L  GP    P+    L  HP L    L+VA  EA++R+ AA++ PGI +GPHLS P  G +    +GG  Q+TLPLPS WRG +E+ L  R A ++   D L+   S AR A+ R  E + R    A AV +AA ++W + R  FRVG+     W++AL+ Q  A+ + ++      +A LD+   AGP
Sbjct:  138 ESVATFDLLGILGVGESAAEQAQADVRVLRARCRLEQELWSARFVVERARVRLAAVRARQELLRVLGTELREDMERFRILQLNRRLS----DAEWGLISAREDLLLQKLSLLASEEAALRHELAVAAGLPIDHPALDRPAIDALTDL--GPTVELPSSARLLETHPRLRYLRLDVAEAEAQLRTIAASAIPGIRMGPHLSWPGSGTQ----LGGALQLTLPLPSQWRGEIEAALIERTARIQQLEDELLSHGSLARTAQLRCEEARVRQEEHAVAVQNAASESWRATRLRFRVGQATSRDWLRALDAQMLAVVLGVNSTATEHIATLDVLELAGP 462          
BLAST of mRNA_P-canaliculata_contig97915.23888.1 vs. uniprot
Match: A0A2E6DAK5_9BACT (Uncharacterized protein n=3 Tax=cellular organisms TaxID=131567 RepID=A0A2E6DAK5_9BACT)

HSP 1 Score: 106 bits (264), Expect = 5.190e-22
Identity = 99/328 (30.18%), Postives = 157/328 (47.87%), Query Frame = 0
Query:   12 LGLGPSAAAK-------LEAGAGEAASLASFASVAWDARTQVAKARLALAAIRARRQAVLVLADEASSDLGRIEILQRTGRVGLAPARAAHGMVAALERRASVLAEMESVARAVLARAAGMTPDDPALEQPGAELLLHLSEGPLPAEPTGEGEL--RHPSLTEAHLEVALREARVRSAAAASWPGIGVGPHLSLPSGGLRDTIRVGGLFQVTLPLPSSWRGIMESRLELRAAAVEGYVDALVDLRSRARDAE-TRALEIQGRSGFTAAVHHAAEDAWISARAGFRVGRVDLNLWIQALERQGNAITMPIDDLEALALAALDLEWAAGP 329
            LGLGP+ A +       L+A +G  A+L       W    +V ++R++LAA RAR  A+  L  +  +D  R+EIL   GR+  A          +L    S L   E+ A A+L+  +G+    P+L  P    +L    G      T  G L  RHP L    + +A+ E ++R  AA +WP + +GPH+SL    + D   +GGL Q+ LP PSSWRG +E+    RA  +E   +A ++  +R   +  + A  +  R   + A+   A   W ++RA    G   ++ W    + + ++  + ID  E   LA +DL+   GP
Sbjct:  117 LGLGPAEAERELARTEVLQATSGLEAAL-------WSTCFKVERSRVSLAAARARYTALEQLQSDLQTDRVRLEILHAHGRLTAAAWEGVEARTHSLAAAVSRLRVQEAKAEALLSGVSGVPMGHPSLAVPVQAQILSADLGT-----TDAGGLLDRHPLLRRERITLAVAEVQLRRVAAKAWPEVRIGPHVSL----ITDAPTLGGLVQLQLPWPSSWRGELEATEARRARQLERIEEAYLEQLARIEQSRASHADALVQRDLHSPAMERGAAAMWGASRARLHEGEEPMSRWFDFFDNRLDSSHLVIDAWEQEQLARIDLQDHLGP 428          
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97915.23888.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A518CVV2_9BACT4.070e-5441.35Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A518EUV2_9BACT5.640e-4437.10Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2D5XR75_9BACT9.920e-4338.51Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A2E6DAK5_9BACT5.190e-2230.18Uncharacterized protein n=3 Tax=cellular organisms... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1600.10coord: 6..329
e-value: 3.9E-18
score: 67.8
NoneNo IPR availableSUPERFAMILY56954Outer membrane efflux proteins (OEP)coord: 23..328

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97915contigP-canaliculata_contig97915:70..1071 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97915.23888.1mRNA_P-canaliculata_contig97915.23888.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig97915 70..1071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig97915.23888.1 ID=prot_P-canaliculata_contig97915.23888.1|Name=mRNA_P-canaliculata_contig97915.23888.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=334bp
ESAALFDLLGHLGLGPSAAAKLEAGAGEAASLASFASVAWDARTQVAKAR
LALAAIRARRQAVLVLADEASSDLGRIEILQRTGRVGLAPARAAHGMVAA
LERRASVLAEMESVARAVLARAAGMTPDDPALEQPGAELLLHLSEGPLPA
EPTGEGELRHPSLTEAHLEVALREARVRSAAAASWPGIGVGPHLSLPSGG
LRDTIRVGGLFQVTLPLPSSWRGIMESRLELRAAAVEGYVDALVDLRSRA
RDAETRALEIQGRSGFTAAVHHAAEDAWISARAGFRVGRVDLNLWIQALE
RQGNAITMPIDDLEALALAALDLEWAAGPEAAR*
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