prot_P-canaliculata_contig97866.23884.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig97866.23884.1
Unique Nameprot_P-canaliculata_contig97866.23884.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length103
Homology
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BLAST of mRNA_P-canaliculata_contig97866.23884.1 vs. uniprot
Match: A0A848U100_9GAMM (Uncharacterized protein n=1 Tax=Granulosicoccus sp. TaxID=1943584 RepID=A0A848U100_9GAMM)

HSP 1 Score: 92.4 bits (228), Expect = 2.370e-21
Identity = 44/102 (43.14%), Postives = 65/102 (63.73%), Query Frame = 0 
Query:    1 ETGLD--WESPSARTRVVRFGASSCLASVLSQDPEAVAKEFQLSYCGVLIFNWNEYRWPHLLSEDRKVPDLDYIDLPQNCIDELMDYHITMQTSWLYRYQTA 100
            +TG +  W SP ART+V+R G+S  + SVL Q P AV+ EF++ + GV +F+W EYRWP+L   D        I+LP +C+ EL+ +H+   T+WL RY+  
Sbjct:   45 QTGYECGWISPDARTQVIRHGSSVAMHSVLQQVPGAVSAEFEVIHDGVKVFSWCEYRWPNLQPGDALRYPSGEIELPVDCLSELLQFHVEHHTAWLARYRAV 146
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97866.23884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A848U100_9GAMM2.370e-2143.14Uncharacterized protein n=1 Tax=Granulosicoccus sp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97866contigP-canaliculata_contig97866:50..358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97866.23884.1mRNA_P-canaliculata_contig97866.23884.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig97866 50..358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig97866.23884.1 ID=prot_P-canaliculata_contig97866.23884.1|Name=mRNA_P-canaliculata_contig97866.23884.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=103bp
ETGLDWESPSARTRVVRFGASSCLASVLSQDPEAVAKEFQLSYCGVLIFN
WNEYRWPHLLSEDRKVPDLDYIDLPQNCIDELMDYHITMQTSWLYRYQTA
IGD
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