prot_P-canaliculata_contig9784.23881.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig9784.23881.1
Unique Nameprot_P-canaliculata_contig9784.23881.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length130
Homology
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BLAST of mRNA_P-canaliculata_contig9784.23881.1 vs. uniprot
Match: A0A6H5JRW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW4_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 2.010e-47
Identity = 89/121 (73.55%), Postives = 98/121 (80.99%), Query Frame = 0 
Query:    1 MRMDNACLVADGEGGVLGFTAARALRFRGFFVSYADVSGGGVSLPVAGQIFRDTRCRGFSLQRWASKRTPEEARALAARSLEAAAAAGLRLECVQEFDLEEAESAIEAARAPSGGPVTFRG 121
            MRMDNAC+VADGEGGVLGFTAARALRFRG FVSYAD+SGGGVSLPVAGQIF DT+CRGFSL+RWAS R P E R L  RSL  AA+AGLRLE  ++F L EA  AI+A R  +G PV  RG
Sbjct:  253 MRMDNACIVADGEGGVLGFTAARALRFRGCFVSYADLSGGGVSLPVAGQIFSDTKCRGFSLRRWASARPPSEKRDLVERSLGVAASAGLRLEGARDFPLREAALAIDAVRQ-TGCPVLLRG 372
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BLAST of mRNA_P-canaliculata_contig9784.23881.1 vs. uniprot
Match: D8LLP9_ECTSI (Zinc binding dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLP9_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 7.550e-47
Identity = 88/121 (72.73%), Postives = 97/121 (80.17%), Query Frame = 0 
Query:    1 MRMDNACLVADGEGGVLGFTAARALRFRGFFVSYADVSGGGVSLPVAGQIFRDTRCRGFSLQRWASKRTPEEARALAARSLEAAAAAGLRLECVQEFDLEEAESAIEAARAPSGGPVTFRG 121
            MRMDNAC+VADGEGGVLGFTAARALRFRG FVSYAD+SGGGVSLPVAGQIF DT+CRGFSL+RWAS R P E R L  RSL  AA+AGLRLE  ++F L EA  AI+  R  +G PV  RG
Sbjct:  266 MRMDNACIVADGEGGVLGFTAARALRFRGCFVSYADLSGGGVSLPVAGQIFSDTKCRGFSLRRWASSRPPSEKRELVERSLGVAASAGLRLEGARDFPLREAALAIDTLRQ-TGCPVLLRG 385
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig9784.23881.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JRW4_9PHAE2.010e-4773.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLP9_ECTSI7.550e-4772.73Zinc binding dehydrogenase n=1 Tax=Ectocarpus sili... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.180.10coord: 91..107
e-value: 1.3E-14
score: 55.8
NoneNo IPR availableGENE3D3.40.50.720coord: 6..90
e-value: 1.3E-14
score: 55.8
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 8..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig9784contigP-canaliculata_contig9784:4765..5562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig9784.23881.1mRNA_P-canaliculata_contig9784.23881.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig9784 3304..5851 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig9784.23881.1 ID=prot_P-canaliculata_contig9784.23881.1|Name=mRNA_P-canaliculata_contig9784.23881.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=130bp
MRMDNACLVADGEGGVLGFTAARALRFRGFFVSYADVSGGGVSLPVAGQI
FRDTRCRGFSLQRWASKRTPEEARALAARSLEAAAAAGLRLECVQEFDLE
EAESAIEAARAPSGGPVTFRGCNTRTRNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf