prot_P-canaliculata_contig97486.23830.1 (polypeptide) Pelvetia canaliculata dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-canaliculata_contig97486.23830.1
Unique Nameprot_P-canaliculata_contig97486.23830.1
Typepolypeptide
OrganismPelvetia canaliculata dioecious (Pelvetia canaliculata dioecious (Channelled wrack))
Sequence length243
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-canaliculata_contig97486.23830.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.272.10coord: 121..238
e-value: 9.1E-14
score: 53.6
NoneNo IPR availablePANTHERPTHR34388FAMILY NOT NAMEDcoord: 19..233
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 123..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-canaliculata_contig97486contigP-canaliculata_contig97486:8..736 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Pelvetia canaliculata dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-canaliculata_contig97486.23830.1mRNA_P-canaliculata_contig97486.23830.1Pelvetia canaliculata dioeciousmRNAP-canaliculata_contig97486 8..736 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-canaliculata_contig97486.23830.1 ID=prot_P-canaliculata_contig97486.23830.1|Name=mRNA_P-canaliculata_contig97486.23830.1|organism=Pelvetia canaliculata dioecious|type=polypeptide|length=243bp
KKLLEVLANPNLSFDGNKLVATFSGKAERLLKKVTKNSFDMANLVCTEPD
YKSATNVINWLAKQVGIRLDNRSIKFISQAFEGNLQGAIQQLNLLRFILG
ESKKEHTLKDIQPYLQTVSLENNFSITNALLAKDFAKASFYIEKFILSGE
NAIALTGLLAFFIRQVIIFNIQNKNQENLGFKPRVPPFLKDKYTSFARSY
GENAIVALKKCQQVDTKLKSSRLDSVLLLNDTLHTLEKGLAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008921DNA_pol3_clamp-load_cplx_C